RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 G3V4G9 280 aa13.56□□□□□ -0.24
ARHGEF1-213ENST00000595897 IGLC6P0CF74 106 aa13.56□□□□□ -0.24
ARHGEF1-213ENST00000595897 C5orf64Q2M2E5 130 aa13.56□□□□□ -0.24
ARHGEF1-213ENST00000595897 GAS8-AS1O95177 125 aa13.55□□□□□ -0.24
ARHGEF1-213ENST00000595897 PPIFP30405 207 aaKnown RBP13.55□□□□□ -0.24
ARHGEF1-213ENST00000595897 CEACAM3P40198 252 aa13.55□□□□□ -0.24
ARHGEF1-213ENST00000595897 SAMD5Q5TGI4 173 aa13.55□□□□□ -0.24
ARHGEF1-213ENST00000595897 ARPC1AQ92747 370 aa13.55□□□□□ -0.24
ARHGEF1-213ENST00000595897 KLRD1Q13241 179 aa13.54□□□□□ -0.24
ARHGEF1-213ENST00000595897 CSMD1Q96PZ7 3565 aa13.54□□□□□ -0.24
ARHGEF1-213ENST00000595897 IGKV2D-26A0A0A0MRZ7 120 aa13.54□□□□□ -0.24
ARHGEF1-213ENST00000595897 FABP5P3A8MUU1 101 aa13.54□□□□□ -0.24
ARHGEF1-213ENST00000595897 F8W735 103 aaPredicted RBP13.54□□□□□ -0.24
ARHGEF1-213ENST00000595897 TNFRSF6BO95407 300 aa13.54□□□□□ -0.24
ARHGEF1-213ENST00000595897 COX8CQ7Z4L0 72 aa13.54□□□□□ -0.24
ARHGEF1-213ENST00000595897 RNF185Q96GF1 192 aa13.54□□□□□ -0.24
ARHGEF1-213ENST00000595897 NXT2Q9NPJ8 142 aaKnown RBP13.54□□□□□ -0.24
ARHGEF1-213ENST00000595897 SCGB2A1O75556 95 aa13.53□□□□□ -0.24
ARHGEF1-213ENST00000595897 FCER1GP30273 86 aa13.53□□□□□ -0.24
ARHGEF1-213ENST00000595897 NPBQ8NG41 125 aa13.53□□□□□ -0.24
ARHGEF1-213ENST00000595897 ARHGAP32A7KAX9 2087 aa13.53□□□□□ -0.24
ARHGEF1-213ENST00000595897 NDUFA3O95167 84 aa13.53□□□□□ -0.24
ARHGEF1-213ENST00000595897 ODF1Q14990 250 aa13.53□□□□□ -0.24
ARHGEF1-213ENST00000595897 CFHR4Q92496 578 aa13.53□□□□□ -0.24
ARHGEF1-213ENST00000595897 IGKCP01834 107 aa13.53□□□□□ -0.24
ARHGEF1-213ENST00000595897 FXYD2P54710 66 aa13.53□□□□□ -0.24
ARHGEF1-213ENST00000595897 RPL24P83731 157 aaKnown RBP13.53□□□□□ -0.24
ARHGEF1-213ENST00000595897 FOXC2Q99958 501 aa13.53□□□□□ -0.24
ARHGEF1-213ENST00000595897 GATA1P15976 413 aaPredicted RBP13.52□□□□□ -0.24
ARHGEF1-213ENST00000595897 ERCC8Q13216 396 aa13.52□□□□□ -0.24
ARHGEF1-213ENST00000595897 ZNF562Q6V9R5 426 aa13.52□□□□□ -0.24
ARHGEF1-213ENST00000595897 GTSCR1Q86UQ5 136 aa13.52□□□□□ -0.24
ARHGEF1-213ENST00000595897 AKAP13Q12802 2813 aa13.52□□□□□ -0.25
ARHGEF1-213ENST00000595897 NDPQ00604 133 aa13.52□□□□□ -0.25
ARHGEF1-213ENST00000595897 ZNF672Q499Z4 452 aaPredicted RBP13.52□□□□□ -0.25
ARHGEF1-213ENST00000595897 NEGR1Q7Z3B1 354 aa13.52□□□□□ -0.25
ARHGEF1-213ENST00000595897 CHAC1Q9BUX1 264 aa13.52□□□□□ -0.25
ARHGEF1-213ENST00000595897 NPFFR1Q9GZQ6 430 aa13.52□□□□□ -0.25
ARHGEF1-213ENST00000595897 SMAD5-AS1Q9Y6J3 95 aa13.52□□□□□ -0.25
ARHGEF1-213ENST00000595897 LY6HO94772 140 aa13.51□□□□□ -0.25
ARHGEF1-213ENST00000595897 TMEM158Q8WZ71 300 aa13.51□□□□□ -0.25
ARHGEF1-213ENST00000595897 ZNF48Q96MX3 618 aaPredicted RBP13.51□□□□□ -0.25
ARHGEF1-213ENST00000595897 HHLA3Q9XRX5 114 aa13.51□□□□□ -0.25
ARHGEF1-213ENST00000595897 K7ERJ3 54 aa13.51□□□□□ -0.25
ARHGEF1-213ENST00000595897 LINC01560Q8TB33 94 aa13.51□□□□□ -0.25
ARHGEF1-213ENST00000595897 CACNA1BQ00975 2339 aa13.5□□□□□ -0.25
ARHGEF1-213ENST00000595897 CTSGP08311 255 aa13.5□□□□□ -0.25
ARHGEF1-213ENST00000595897 PSMG4Q5JS54 123 aa13.5□□□□□ -0.25
ARHGEF1-213ENST00000595897 ZC2HC1BQ5TFG8 222 aa13.5□□□□□ -0.25
ARHGEF1-213ENST00000595897 DYNAPQ8N1N2 210 aa13.5□□□□□ -0.25
ARHGEF1-213ENST00000595897 ANKHD1Q8IWZ3 2542 aaKnown RBP13.5□□□□□ -0.25
ARHGEF1-213ENST00000595897 IGHG4P01861 327 aa13.5□□□□□ -0.25
ARHGEF1-213ENST00000595897 OR11H6Q8NGC7 330 aa13.5□□□□□ -0.25
ARHGEF1-213ENST00000595897 TMEM160Q9NX00 188 aa13.5□□□□□ -0.25
ARHGEF1-213ENST00000595897 SPTA1P02549 2419 aa13.5□□□□□ -0.25
ARHGEF1-213ENST00000595897 DTX2Q86UW9 622 aa13.5□□□□□ -0.25
ARHGEF1-213ENST00000595897 TTC9CQ8N5M4 171 aa13.5□□□□□ -0.25
ARHGEF1-213ENST00000595897 NHP2Q9NX24 153 aaKnown RBP13.5□□□□□ -0.25
ARHGEF1-213ENST00000595897 TMEM238C9JI98 176 aa13.49□□□□□ -0.25
ARHGEF1-213ENST00000595897 DPM2O94777 84 aa13.49□□□□□ -0.25
ARHGEF1-213ENST00000595897 TRBV25-1A0A075B6N4 114 aa13.49□□□□□ -0.25
ARHGEF1-213ENST00000595897 TMEM8BA6NDV4 472 aa13.49□□□□□ -0.25
ARHGEF1-213ENST00000595897 ZNF575Q86XF7 245 aa13.49□□□□□ -0.25
ARHGEF1-213ENST00000595897 PIFOQ8TCI5 191 aa13.49□□□□□ -0.25
ARHGEF1-213ENST00000595897 HIGD1BQ9P298 99 aa13.49□□□□□ -0.25
ARHGEF1-213ENST00000595897 PRAC2D3DTV9 90 aa13.48□□□□□ -0.25
ARHGEF1-213ENST00000595897 PRR30Q53SZ7 412 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF1-213ENST00000595897 RNF182Q8N6D2 247 aa13.48□□□□□ -0.25
ARHGEF1-213ENST00000595897 CNFNQ9BYD5 112 aa13.48□□□□□ -0.25
ARHGEF1-213ENST00000595897 IL17RELQ6ZVW7 336 aa13.48□□□□□ -0.25
ARHGEF1-213ENST00000595897 LY6G5BQ8NDX9 201 aa13.48□□□□□ -0.25
ARHGEF1-213ENST00000595897 ZMAT4Q9H898 229 aa13.48□□□□□ -0.25
ARHGEF1-213ENST00000595897 LRBAP50851 2863 aa13.48□□□□□ -0.25
ARHGEF1-213ENST00000595897 ATP5LO75964 103 aa13.47□□□□□ -0.25
ARHGEF1-213ENST00000595897 Q8NA96 180 aa13.47□□□□□ -0.25
ARHGEF1-213ENST00000595897 MED13LQ71F56 2210 aa13.47□□□□□ -0.25
ARHGEF1-213ENST00000595897 TRAV40A0A0B4J280 105 aa13.47□□□□□ -0.25
ARHGEF1-213ENST00000595897 IGHV3-66A0A0C4DH42 116 aa13.47□□□□□ -0.25
ARHGEF1-213ENST00000595897 SMIM17P0DL12 118 aa13.47□□□□□ -0.25
ARHGEF1-213ENST00000595897 K7EMI3 77 aa13.47□□□□□ -0.25
ARHGEF1-213ENST00000595897 SRSF2Q01130 221 aaKnown RBP13.47□□□□□ -0.25
ARHGEF1-213ENST00000595897 SMPXQ9UHP9 88 aa13.47□□□□□ -0.25
ARHGEF1-213ENST00000595897 UFC1Q9Y3C8 167 aa13.47□□□□□ -0.25
ARHGEF1-213ENST00000595897 MYOZ3Q8TDC0 251 aa13.46□□□□□ -0.25
ARHGEF1-213ENST00000595897 ZFHX2Q9C0A1 2572 aaPredicted RBP13.46□□□□□ -0.26
ARHGEF1-213ENST00000595897 IGHV3OR16-13A0A075B7E8 117 aa13.46□□□□□ -0.26
ARHGEF1-213ENST00000595897 IGHV3-74A0A0B4J1X5 117 aa13.46□□□□□ -0.26
ARHGEF1-213ENST00000595897 LINC01559Q495D7 138 aa13.46□□□□□ -0.26
ARHGEF1-213ENST00000595897 Q8N8P6 123 aa13.46□□□□□ -0.26
ARHGEF1-213ENST00000595897 TIMD4Q96H15 378 aa13.46□□□□□ -0.26
ARHGEF1-213ENST00000595897 MRPL35Q9NZE8 188 aaKnown RBP13.45□□□□□ -0.26
ARHGEF1-213ENST00000595897 LINC01546A6NGU7 62 aa13.45□□□□□ -0.26
ARHGEF1-213ENST00000595897 CCDC144NLQ6NUI1 221 aa13.45□□□□□ -0.26
ARHGEF1-213ENST00000595897 CEND1Q8N111 149 aa13.45□□□□□ -0.26
ARHGEF1-213ENST00000595897 SPOCK3Q9BQ16 436 aa13.45□□□□□ -0.26
ARHGEF1-213ENST00000595897 TLN1Q9Y490 2541 aaKnown RBP13.45□□□□□ -0.26
ARHGEF1-213ENST00000595897 TRAV26-2A0A0B4J265 109 aa13.44□□□□□ -0.26
ARHGEF1-213ENST00000595897 TEX48A0A1B0GUV7 120 aa13.44□□□□□ -0.26
ARHGEF1-213ENST00000595897 TRGV3P03979 118 aa13.44□□□□□ -0.26
ARHGEF1-213ENST00000595897 BSNQ9UPA5 3926 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms