RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 GAGE12GP0CL81 117 aa9.42□□□□□ -0.9
CAPNS1-213ENST00000592354 GAGE12IP0CL82 117 aa9.42□□□□□ -0.9
CAPNS1-213ENST00000592354 CT45A10P0DMU9 189 aa9.42□□□□□ -0.9
CAPNS1-213ENST00000592354 RPL29P47914 159 aaKnown RBP9.42□□□□□ -0.9
CAPNS1-213ENST00000592354 CCL18P55774 89 aa9.42□□□□□ -0.9
CAPNS1-213ENST00000592354 TNP2Q05952 138 aa9.42□□□□□ -0.9
CAPNS1-213ENST00000592354 OR5I1Q13606 314 aa9.42□□□□□ -0.9
CAPNS1-213ENST00000592354 GCSAMLQ5JQS6 135 aa9.42□□□□□ -0.9
CAPNS1-213ENST00000592354 CCDC28AQ8IWP9 274 aa9.42□□□□□ -0.9
CAPNS1-213ENST00000592354 PFDN5Q99471 154 aa9.42□□□□□ -0.9
CAPNS1-213ENST00000592354 C20orf144Q9BQM9 153 aa9.42□□□□□ -0.9
CAPNS1-213ENST00000592354 TRAV26-1A0A087WT03 109 aa9.41□□□□□ -0.9
CAPNS1-213ENST00000592354 A0A0J9YY99 117 aa9.41□□□□□ -0.9
CAPNS1-213ENST00000592354 SNURFLB1AK76 121 aa9.41□□□□□ -0.9
CAPNS1-213ENST00000592354 NPIPB6E9PJ23 425 aa9.41□□□□□ -0.9
CAPNS1-213ENST00000592354 M0R3E3 92 aa9.41□□□□□ -0.9
CAPNS1-213ENST00000592354 MPDU1O75352 247 aa9.41□□□□□ -0.9
CAPNS1-213ENST00000592354 HOXA5P20719 270 aa9.41□□□□□ -0.9
CAPNS1-213ENST00000592354 LEPP41159 167 aa9.41□□□□□ -0.9
CAPNS1-213ENST00000592354 GUK1Q16774 197 aa9.41□□□□□ -0.9
CAPNS1-213ENST00000592354 Q6ZNX1 250 aa9.41□□□□□ -0.9
CAPNS1-213ENST00000592354 SSX7Q7RTT5 188 aa9.41□□□□□ -0.9
CAPNS1-213ENST00000592354 AQP10Q96PS8 301 aa9.41□□□□□ -0.9
CAPNS1-213ENST00000592354 RNF222A6NCQ9 220 aa9.4□□□□□ -0.9
CAPNS1-213ENST00000592354 IFNA5P01569 189 aa9.4□□□□□ -0.9
CAPNS1-213ENST00000592354 PYYP10082 97 aa9.4□□□□□ -0.9
CAPNS1-213ENST00000592354 ERCC8Q13216 396 aa9.4□□□□□ -0.9
CAPNS1-213ENST00000592354 C6orf223Q8N319 242 aa9.4□□□□□ -0.9
CAPNS1-213ENST00000592354 LINC00612Q8N6U2 182 aa9.4□□□□□ -0.9
CAPNS1-213ENST00000592354 SCGB1C1Q8TD33 95 aa9.4□□□□□ -0.9
CAPNS1-213ENST00000592354 GNPNAT1Q96EK6 184 aaPredicted RBP9.4□□□□□ -0.9
CAPNS1-213ENST00000592354 TNFSF18Q9UNG2 199 aa9.4□□□□□ -0.9
CAPNS1-213ENST00000592354 TRBV19A0A075B6N1 114 aa9.39□□□□□ -0.91
CAPNS1-213ENST00000592354 ARPC5O15511 151 aa9.39□□□□□ -0.91
CAPNS1-213ENST00000592354 M6PRP20645 277 aa9.39□□□□□ -0.91
CAPNS1-213ENST00000592354 INO80EQ8NBZ0 244 aaPredicted RBP9.39□□□□□ -0.91
CAPNS1-213ENST00000592354 BLNKQ8WV28 456 aa9.39□□□□□ -0.91
CAPNS1-213ENST00000592354 ODF3Q96PU9 254 aa9.39□□□□□ -0.91
CAPNS1-213ENST00000592354 TMPRSS5Q9H3S3 457 aa9.39□□□□□ -0.91
CAPNS1-213ENST00000592354 C7orf71A4D174 169 aa9.38□□□□□ -0.91
CAPNS1-213ENST00000592354 C17orf112F2Z3M2 114 aa9.38□□□□□ -0.91
CAPNS1-213ENST00000592354 ZNF253O75346 499 aa9.38□□□□□ -0.91
CAPNS1-213ENST00000592354 BTN1A1Q13410 526 aa9.38□□□□□ -0.91
CAPNS1-213ENST00000592354 FFAR4Q5NUL3 377 aa9.38□□□□□ -0.91
CAPNS1-213ENST00000592354 Q6ZTI0 123 aa9.38□□□□□ -0.91
CAPNS1-213ENST00000592354 PYGO2Q9BRQ0 406 aa9.38□□□□□ -0.91
CAPNS1-213ENST00000592354 IGKV2-40A0A087WW87 121 aaPredicted RBP9.37□□□□□ -0.91
CAPNS1-213ENST00000592354 C16orf90A8MZG2 172 aa9.37□□□□□ -0.91
CAPNS1-213ENST00000592354 EIF3GO75821 320 aaKnown RBP eCLIP9.37□□□□□ -0.91
CAPNS1-213ENST00000592354 NDUFB4O95168 129 aa9.37□□□□□ -0.91
CAPNS1-213ENST00000592354 IGKV2D-40P01614 121 aaPredicted RBP9.37□□□□□ -0.91
CAPNS1-213ENST00000592354 EXOC3-AS1Q8N2X6 119 aa9.37□□□□□ -0.91
CAPNS1-213ENST00000592354 HSD17B11Q8NBQ5 300 aa9.37□□□□□ -0.91
CAPNS1-213ENST00000592354 OR11H4Q8NGC9 324 aa9.37□□□□□ -0.91
CAPNS1-213ENST00000592354 RXFP4Q8TDU9 374 aa9.37□□□□□ -0.91
CAPNS1-213ENST00000592354 SLC25A2Q9BXI2 301 aa9.37□□□□□ -0.91
CAPNS1-213ENST00000592354 KRTAP1-5Q9BYS1 174 aa9.37□□□□□ -0.91
CAPNS1-213ENST00000592354 GSN-AS1Q9NRJ2 163 aa9.37□□□□□ -0.91
CAPNS1-213ENST00000592354 KCNIP2Q9NS61 270 aa9.37□□□□□ -0.91
CAPNS1-213ENST00000592354 TMEM14CQ9P0S9 112 aa9.37□□□□□ -0.91
CAPNS1-213ENST00000592354 TIMM9Q9Y5J7 89 aa9.37□□□□□ -0.91
CAPNS1-213ENST00000592354 SLC25A5P05141 298 aaKnown RBP9.36□□□□□ -0.91
CAPNS1-213ENST00000592354 HIST1H1EP10412 219 aaKnown RBP9.36□□□□□ -0.91
CAPNS1-213ENST00000592354 CD300CQ08708 224 aa9.36□□□□□ -0.91
CAPNS1-213ENST00000592354 RPL7L1Q6DKI1 246 aaKnown RBP9.36□□□□□ -0.91
CAPNS1-213ENST00000592354 MIR17HGQ75NE6 70 aa9.36□□□□□ -0.91
CAPNS1-213ENST00000592354 MRPL53Q96EL3 112 aaKnown RBP9.36□□□□□ -0.91
CAPNS1-213ENST00000592354 ST6GAL2Q96JF0 529 aa9.36□□□□□ -0.91
CAPNS1-213ENST00000592354 Q9H8V8 135 aa9.36□□□□□ -0.91
CAPNS1-213ENST00000592354 MUC4Q99102 2169 aa9.36□□□□□ -0.91
CAPNS1-213ENST00000592354 TRGV2A0A075B6R0 118 aa9.35□□□□□ -0.91
CAPNS1-213ENST00000592354 A0A1B0GVG6 124 aa9.35□□□□□ -0.91
CAPNS1-213ENST00000592354 RNASE4P34096 147 aaKnown RBP9.35□□□□□ -0.91
CAPNS1-213ENST00000592354 DAZ2Q13117 558 aaKnown RBP9.35□□□□□ -0.91
CAPNS1-213ENST00000592354 ZNF266Q14584 549 aa9.35□□□□□ -0.91
CAPNS1-213ENST00000592354 ICAM4Q14773 271 aa9.35□□□□□ -0.91
CAPNS1-213ENST00000592354 ESRGQ1W209 222 aa9.35□□□□□ -0.91
CAPNS1-213ENST00000592354 FAM122CQ6P4D5 195 aa9.35□□□□□ -0.91
CAPNS1-213ENST00000592354 C11orf72Q8NBR9 251 aa9.35□□□□□ -0.91
CAPNS1-213ENST00000592354 ZNF680Q8NEM1 530 aa9.35□□□□□ -0.91
CAPNS1-213ENST00000592354 KRTAP4-5Q9BYR2 181 aa9.35□□□□□ -0.91
CAPNS1-213ENST00000592354 AGPAT4-IT1Q9H0P7 198 aa9.35□□□□□ -0.91
CAPNS1-213ENST00000592354 SH3BGRL3Q9H299 93 aa9.35□□□□□ -0.91
CAPNS1-213ENST00000592354 AAMDCQ9H7C9 122 aa9.35□□□□□ -0.91
CAPNS1-213ENST00000592354 TRGV1A0A0A0MS02 117 aa9.34□□□□□ -0.91
CAPNS1-213ENST00000592354 KLLNB2CW77 178 aa9.34□□□□□ -0.91
CAPNS1-213ENST00000592354 ATP6V0CP27449 155 aa9.34□□□□□ -0.91
CAPNS1-213ENST00000592354 RAB2AP61019 212 aa9.34□□□□□ -0.91
CAPNS1-213ENST00000592354 PDE6HQ13956 83 aa9.34□□□□□ -0.91
CAPNS1-213ENST00000592354 PRR9Q5T870 116 aa9.34□□□□□ -0.91
CAPNS1-213ENST00000592354 ZNF503Q96F45 646 aa9.34□□□□□ -0.91
CAPNS1-213ENST00000592354 FAM19A4Q96LR4 140 aa9.34□□□□□ -0.91
CAPNS1-213ENST00000592354 PRELID1Q9Y255 219 aa9.34□□□□□ -0.91
CAPNS1-213ENST00000592354 KLF12Q9Y4X4 402 aa9.34□□□□□ -0.91
CAPNS1-213ENST00000592354 RYR1P21817 5038 aa9.33□□□□□ -0.92
CAPNS1-213ENST00000592354 ZNF324O75467 553 aaPredicted RBP9.33□□□□□ -0.92
CAPNS1-213ENST00000592354 GPX1P07203 203 aa9.33□□□□□ -0.92
CAPNS1-213ENST00000592354 OR10J4P0C629 311 aa9.33□□□□□ -0.92
CAPNS1-213ENST00000592354 TTC32Q5I0X7 151 aa9.33□□□□□ -0.92
CAPNS1-213ENST00000592354 Q6ZQT7 251 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms