RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 OR4B1Q8NGF8 309 aa7.15□□□□□ -1.26
VPS25-205ENST00000590339 ZC2HC1AQ96GY0 325 aa7.15□□□□□ -1.26
VPS25-205ENST00000590339 RPP21Q9H633 154 aaKnown RBP7.15□□□□□ -1.26
VPS25-205ENST00000590339 IGHV3OR16-13A0A075B7E8 117 aa7.14□□□□□ -1.27
VPS25-205ENST00000590339 IGKV2-40A0A087WW87 121 aaPredicted RBP7.14□□□□□ -1.27
VPS25-205ENST00000590339 IGHV3-49A0A0A0MS15 119 aa7.14□□□□□ -1.27
VPS25-205ENST00000590339 IGHV3-74A0A0B4J1X5 117 aa7.14□□□□□ -1.27
VPS25-205ENST00000590339 IGHV3-66A0A0C4DH42 116 aa7.14□□□□□ -1.27
VPS25-205ENST00000590339 IGHV7-4-1A0A0J9YVY3 117 aa7.14□□□□□ -1.27
VPS25-205ENST00000590339 RBAKDNA6NC62 111 aa7.14□□□□□ -1.27
VPS25-205ENST00000590339 IZUMO1RA6ND01 250 aa7.14□□□□□ -1.27
VPS25-205ENST00000590339 A8MWP6 167 aa7.14□□□□□ -1.27
VPS25-205ENST00000590339 IGKV2D-40P01614 121 aaPredicted RBP7.14□□□□□ -1.27
VPS25-205ENST00000590339 SNRPEP62304 92 aaKnown RBP7.14□□□□□ -1.27
VPS25-205ENST00000590339 NSUN5P1Q3KNT7 163 aa7.14□□□□□ -1.27
VPS25-205ENST00000590339 PRR27Q6MZM9 219 aa7.14□□□□□ -1.27
VPS25-205ENST00000590339 TSKUQ8WUA8 353 aa7.14□□□□□ -1.27
VPS25-205ENST00000590339 SAV1Q9H4B6 383 aaPredicted RBP7.14□□□□□ -1.27
VPS25-205ENST00000590339 DAZ1Q9NQZ3 744 aaKnown RBP7.14□□□□□ -1.27
VPS25-205ENST00000590339 CLEC5AQ9NY25 188 aa7.14□□□□□ -1.27
VPS25-205ENST00000590339 A0A1W2PS18 150 aa7.13□□□□□ -1.27
VPS25-205ENST00000590339 CA1P00915 261 aaPredicted RBP7.13□□□□□ -1.27
VPS25-205ENST00000590339 P01737 135 aa7.13□□□□□ -1.27
VPS25-205ENST00000590339 S100A6P06703 90 aa7.13□□□□□ -1.27
VPS25-205ENST00000590339 CD28P10747 220 aa7.13□□□□□ -1.27
VPS25-205ENST00000590339 COX19Q49B96 90 aa7.13□□□□□ -1.27
VPS25-205ENST00000590339 COA6Q5JTJ3 125 aaKnown RBP7.13□□□□□ -1.27
VPS25-205ENST00000590339 IGFL4Q6B9Z1 124 aa7.13□□□□□ -1.27
VPS25-205ENST00000590339 WIPF2Q8TF74 440 aaPredicted RBP7.13□□□□□ -1.27
VPS25-205ENST00000590339 UBE2E2Q96LR5 201 aa7.13□□□□□ -1.27
VPS25-205ENST00000590339 GFRA4Q9GZZ7 299 aa7.13□□□□□ -1.27
VPS25-205ENST00000590339 A0A1B0GXF2 115 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 TMEM213A2RRL7 107 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 FAM231BA6NCW3 169 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 PRAC2D3DTV9 90 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 LGALS9O00182 355 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 MT-ND6P03923 174 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 HOXA5P20719 270 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 TCL1AP56279 114 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 RPL19P84098 196 aaKnown RBP7.12□□□□□ -1.27
VPS25-205ENST00000590339 FABP9Q0Z7S8 132 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 FAM106AQ4KMX7 169 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 SAPCD1Q5SSQ6 148 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 LCN12Q6JVE5 192 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 WDR73Q6P4I2 378 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 RASL11AQ6T310 242 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 TMEM136Q6ZRR5 245 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 RNF182Q8N6D2 247 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 NUP35Q8NFH5 326 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 C8orf49Q96NF6 230 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 PRR25Q96S07 402 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 NEU1Q99519 415 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 VGLL1Q99990 258 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 GNB1LQ9BYB4 327 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 PPP1R14DQ9NXH3 145 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 NAT8BQ9UHF3 227 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 SMPXQ9UHP9 88 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 UFC1Q9Y3C8 167 aa7.12□□□□□ -1.27
VPS25-205ENST00000590339 IGHV4OR15-8A0A075B7B6 117 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 A0A087WW49 117 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 A0A1W2PRX2 142 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 ZNF705FA8MVS1 300 aaPredicted RBP7.11□□□□□ -1.27
VPS25-205ENST00000590339 A8MWL6 223 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 FRMD6-AS1P0C7T7 363 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 CBLN1P23435 193 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 CRIP1P50238 77 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 TM4SF20Q53R12 229 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 ATP5L2Q7Z4Y8 100 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 GTSF1Q8WW33 167 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 ASCL2Q99929 193 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 CITED2Q99967 270 aaPredicted RBP7.11□□□□□ -1.27
VPS25-205ENST00000590339 RHPN1-AS1Q9BWJ2 59 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 GPR61Q9BZJ8 451 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 NRN1Q9NPD7 142 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 TRAPPC1Q9Y5R8 145 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 MGAM2Q2M2H8 2515 aa7.11□□□□□ -1.27
VPS25-205ENST00000590339 IFITM10A6NMD0 228 aa7.1□□□□□ -1.27
VPS25-205ENST00000590339 HIGD1CA8MV81 97 aa7.1□□□□□ -1.27
VPS25-205ENST00000590339 SNURFLB1AK76 121 aa7.1□□□□□ -1.27
VPS25-205ENST00000590339 HLA-DQA1P01909 254 aa7.1□□□□□ -1.27
VPS25-205ENST00000590339 PRB4P10163 310 aaPredicted RBP7.1□□□□□ -1.27
VPS25-205ENST00000590339 EDN2P20800 178 aa7.1□□□□□ -1.27
VPS25-205ENST00000590339 CDX1P47902 265 aaPredicted RBP7.1□□□□□ -1.27
VPS25-205ENST00000590339 FOXA3P55318 350 aaPredicted RBP7.1□□□□□ -1.27
VPS25-205ENST00000590339 NDUFA6P56556 154 aa7.1□□□□□ -1.27
VPS25-205ENST00000590339 TCTEX1D4Q5JR98 221 aa7.1□□□□□ -1.27
VPS25-205ENST00000590339 C9orf47Q6ZRZ4 202 aa7.1□□□□□ -1.27
VPS25-205ENST00000590339 HIST3H2BBQ8N257 126 aa7.1□□□□□ -1.27
VPS25-205ENST00000590339 Q8TAT8 98 aa7.1□□□□□ -1.27
VPS25-205ENST00000590339 DAZAP1Q96EP5 407 aaKnown RBP7.1□□□□□ -1.27
VPS25-205ENST00000590339 C20orf173Q96LM9 149 aa7.1□□□□□ -1.27
VPS25-205ENST00000590339 MRPL18Q9H0U6 180 aaKnown RBP7.1□□□□□ -1.27
VPS25-205ENST00000590339 TRRAPQ9Y4A5 3859 aa7.1□□□□□ -1.27
VPS25-205ENST00000590339 G3V4G9 280 aa7.09□□□□□ -1.27
VPS25-205ENST00000590339 SH2D1AO60880 128 aa7.09□□□□□ -1.27
VPS25-205ENST00000590339 CT45A10P0DMU9 189 aa7.09□□□□□ -1.27
VPS25-205ENST00000590339 HOXD3P31249 432 aaPredicted RBP7.09□□□□□ -1.27
VPS25-205ENST00000590339 BMI1P35226 326 aa7.09□□□□□ -1.27
VPS25-205ENST00000590339 ERCC8Q13216 396 aa7.09□□□□□ -1.27
VPS25-205ENST00000590339 SAMD13Q5VXD3 122 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms