RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 A0A0D9SG52 128 aa7.24□□□□□ -1.25
TPM4-207ENST00000588032 ZNF705GA8MUZ8 300 aaPredicted RBP7.24□□□□□ -1.25
TPM4-207ENST00000588032 CXorf1O96002 111 aa7.24□□□□□ -1.25
TPM4-207ENST00000588032 C12orf74Q32Q52 190 aa7.24□□□□□ -1.25
TPM4-207ENST00000588032 KCNRGQ8N5I3 272 aa7.24□□□□□ -1.25
TPM4-207ENST00000588032 CMTM2Q8TAZ6 248 aa7.24□□□□□ -1.25
TPM4-207ENST00000588032 C16orf74Q96GX8 76 aa7.24□□□□□ -1.25
TPM4-207ENST00000588032 FAM19A4Q96LR4 140 aa7.24□□□□□ -1.25
TPM4-207ENST00000588032 NIPSNAP3BQ9BS92 247 aa7.24□□□□□ -1.25
TPM4-207ENST00000588032 DKK2Q9UBU2 259 aa7.24□□□□□ -1.25
TPM4-207ENST00000588032 CELA1Q9UNI1 258 aa7.24□□□□□ -1.25
TPM4-207ENST00000588032 YTHDF2Q9Y5A9 579 aaKnown RBP7.24□□□□□ -1.25
TPM4-207ENST00000588032 PGPA6NDG6 321 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 LYRM9A8MSI8 78 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 KLLNB2CW77 178 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 PRB4P10163 310 aaPredicted RBP7.23□□□□□ -1.25
TPM4-207ENST00000588032 CRISP2P16562 243 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 ZNF138P52744 262 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 ERCC8Q13216 396 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 AKR1C8PQ5T2L2 129 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 FAM222AQ5U5X8 452 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 GFI1BQ5VTD9 330 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 Q6ZTC4 211 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 CCDC28AQ8IWP9 274 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 SUN5Q8TC36 379 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 ARPC5LQ9BPX5 153 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 PYGO2Q9BRQ0 406 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 SH3BGRL3Q9H299 93 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 CYTL1Q9NRR1 136 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 TMEM167BQ9NRX6 74 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 ZNF492Q9P255 531 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 LENEPQ9Y5L5 61 aa7.23□□□□□ -1.25
TPM4-207ENST00000588032 IGKV2-40A0A087WW87 121 aaPredicted RBP7.22□□□□□ -1.25
TPM4-207ENST00000588032 DEFB131BA0A096LNP1 70 aa7.22□□□□□ -1.25
TPM4-207ENST00000588032 C7orf71A4D174 169 aa7.22□□□□□ -1.25
TPM4-207ENST00000588032 DIRC3C9JPN6 131 aa7.22□□□□□ -1.25
TPM4-207ENST00000588032 SMLR1H3BR10 107 aa7.22□□□□□ -1.25
TPM4-207ENST00000588032 HMGB3O15347 200 aaKnown RBP7.22□□□□□ -1.25
TPM4-207ENST00000588032 IGKV2D-40P01614 121 aaPredicted RBP7.22□□□□□ -1.25
TPM4-207ENST00000588032 GPX1P07203 203 aa7.22□□□□□ -1.25
TPM4-207ENST00000588032 ARL14EPLP0DKL9 152 aa7.22□□□□□ -1.25
TPM4-207ENST00000588032 HTN1P15515 57 aa7.22□□□□□ -1.25
TPM4-207ENST00000588032 GCHFRP30047 84 aa7.22□□□□□ -1.25
TPM4-207ENST00000588032 EIF5AP63241 154 aaKnown RBP7.22□□□□□ -1.25
TPM4-207ENST00000588032 Q6ZNX1 250 aa7.22□□□□□ -1.25
TPM4-207ENST00000588032 TMEM263Q8WUH6 116 aaKnown RBP7.22□□□□□ -1.25
TPM4-207ENST00000588032 TMED6Q8WW62 240 aa7.22□□□□□ -1.25
TPM4-207ENST00000588032 VGLL1Q99990 258 aa7.22□□□□□ -1.25
TPM4-207ENST00000588032 TIMM8BQ9Y5J9 83 aaPredicted RBP7.22□□□□□ -1.25
TPM4-207ENST00000588032 TRAV12-3A0A0B4J271 114 aa7.21□□□□□ -1.26
TPM4-207ENST00000588032 CTXND1A0A1B0GTU2 59 aa7.21□□□□□ -1.26
TPM4-207ENST00000588032 SERTM2A0A1B0GWG4 89 aa7.21□□□□□ -1.26
TPM4-207ENST00000588032 KANTRA0A1W2PQU2 76 aa7.21□□□□□ -1.26
TPM4-207ENST00000588032 IGLL5B9A064 214 aa7.21□□□□□ -1.26
TPM4-207ENST00000588032 J3KRW8 73 aa7.21□□□□□ -1.26
TPM4-207ENST00000588032 EIF3GO75821 320 aaKnown RBP eCLIP7.21□□□□□ -1.26
TPM4-207ENST00000588032 AZU1P20160 251 aa7.21□□□□□ -1.26
TPM4-207ENST00000588032 DAD1P61803 113 aa7.21□□□□□ -1.26
TPM4-207ENST00000588032 KIR3DS1Q14943 382 aa7.21□□□□□ -1.26
TPM4-207ENST00000588032 OR11H4Q8NGC9 324 aa7.21□□□□□ -1.26
TPM4-207ENST00000588032 RNASE8Q8TDE3 154 aaKnown RBP7.21□□□□□ -1.26
TPM4-207ENST00000588032 ST6GAL2Q96JF0 529 aa7.21□□□□□ -1.26
TPM4-207ENST00000588032 FAM210BQ96KR6 192 aa7.21□□□□□ -1.26
TPM4-207ENST00000588032 HYLS1Q96M11 299 aa7.21□□□□□ -1.26
TPM4-207ENST00000588032 LINC00467Q9BRT7 94 aa7.21□□□□□ -1.26
TPM4-207ENST00000588032 A0A1W2PRE2 83 aa7.2□□□□□ -1.26
TPM4-207ENST00000588032 PLAC8L1A1L4L8 177 aa7.2□□□□□ -1.26
TPM4-207ENST00000588032 UMAD1C9J7I0 102 aa7.2□□□□□ -1.26
TPM4-207ENST00000588032 K7EQM0 130 aa7.2□□□□□ -1.26
TPM4-207ENST00000588032 ZNF324O75467 553 aaPredicted RBP7.2□□□□□ -1.26
TPM4-207ENST00000588032 PRM2P04554 102 aa7.2□□□□□ -1.26
TPM4-207ENST00000588032 SEC11BP0C7V7 166 aa7.2□□□□□ -1.26
TPM4-207ENST00000588032 RNASE4P34096 147 aaKnown RBP7.2□□□□□ -1.26
TPM4-207ENST00000588032 LGALS9CQ6DKI2 356 aa7.2□□□□□ -1.26
TPM4-207ENST00000588032 ZNF767PQ75MW2 155 aa7.2□□□□□ -1.26
TPM4-207ENST00000588032 TCTE3Q8IZS6 198 aa7.2□□□□□ -1.26
TPM4-207ENST00000588032 ZFAND2AQ8N6M9 145 aa7.2□□□□□ -1.26
TPM4-207ENST00000588032 C5orf17Q8NAS9 161 aa7.2□□□□□ -1.26
TPM4-207ENST00000588032 LINC00476Q8WZB0 136 aa7.2□□□□□ -1.26
TPM4-207ENST00000588032 NKX6-2Q9C056 277 aaPredicted RBP7.2□□□□□ -1.26
TPM4-207ENST00000588032 FBLL1A6NHQ2 334 aaKnown RBP7.19□□□□□ -1.26
TPM4-207ENST00000588032 BCL2L11O43521 198 aa7.19□□□□□ -1.26
TPM4-207ENST00000588032 LY6G6CO95867 125 aa7.19□□□□□ -1.26
TPM4-207ENST00000588032 CD300CQ08708 224 aa7.19□□□□□ -1.26
TPM4-207ENST00000588032 ANXA2RQ3ZCQ2 193 aa7.19□□□□□ -1.26
TPM4-207ENST00000588032 ZNF680Q8NEM1 530 aa7.19□□□□□ -1.26
TPM4-207ENST00000588032 STOML3Q8TAV4 291 aa7.19□□□□□ -1.26
TPM4-207ENST00000588032 ZNF471Q9BX82 626 aaPredicted RBP7.19□□□□□ -1.26
TPM4-207ENST00000588032 APLNQ9ULZ1 77 aa7.19□□□□□ -1.26
TPM4-207ENST00000588032 IGHV4-4A0A075B6R2 117 aa7.18□□□□□ -1.26
TPM4-207ENST00000588032 CBY3A6NI87 242 aa7.18□□□□□ -1.26
TPM4-207ENST00000588032 SNURFLB1AK76 121 aa7.18□□□□□ -1.26
TPM4-207ENST00000588032 RGS13O14921 159 aa7.18□□□□□ -1.26
TPM4-207ENST00000588032 PFDN1O60925 122 aa7.18□□□□□ -1.26
TPM4-207ENST00000588032 TCRAP04437 139 aa7.18□□□□□ -1.26
TPM4-207ENST00000588032 DEFB130BP0DP73 79 aa7.18□□□□□ -1.26
TPM4-207ENST00000588032 DEFB130AP0DP74 79 aa7.18□□□□□ -1.26
TPM4-207ENST00000588032 SUMO1P63165 101 aaKnown RBP7.18□□□□□ -1.26
TPM4-207ENST00000588032 DAZ2Q13117 558 aaKnown RBP7.18□□□□□ -1.26
TPM4-207ENST00000588032 BTN1A1Q13410 526 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms