RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 TMEM178BH3BS89 294 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 M0R135 149 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 PRSS1P07477 247 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 CT62P0C5K7 136 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 IFI27P40305 119 aaPredicted RBP4.71□□□□□ -1.66
SMAD4-203ENST00000585448 ZNF137PP52743 207 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 NPC2P61916 151 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 HIST1H4AP62805 103 aaKnown RBP4.71□□□□□ -1.66
SMAD4-203ENST00000585448 MRPS36P82909 103 aaKnown RBP4.71□□□□□ -1.66
SMAD4-203ENST00000585448 VMA21Q3ZAQ7 101 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 FAM19A1Q7Z5A9 133 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 GTSCR1Q86UQ5 136 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 MED12LQ86YW9 2145 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 ORMDL3Q8N138 153 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 SERP2Q8N6R1 65 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 MAPKAPK5-AS1Q8N8E1 139 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 MDS2Q8NDY4 140 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 LYZL4Q96KX0 146 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 RTL8AQ9BWD3 113 aa4.71□□□□□ -1.66
SMAD4-203ENST00000585448 IGKV1-6A0A0C4DH72 117 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 TRBV6-1A0A0K0K1D8 114 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 A0A1W2PQD3 144 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 PRSS46E5RG02 174 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 H0YIG0 161 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 OXTP01178 125 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 GNLYP22749 145 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 LEPP41159 167 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 TNFRSF4P43489 277 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 HERVK_113P61574 105 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 KRTAP1-1Q07627 177 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 ZNF816Q0VGE8 651 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-203ENST00000585448 PIGYQ3MUY2 71 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 MIR17HGQ75NE6 70 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 SPTSSAQ969W0 71 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 FMC1Q96HJ9 113 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 NABP2Q9BQ15 211 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 DPH3P1Q9H4G8 78 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 DYNLRB1Q9NP97 96 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 PRO1854Q9UHT4 67 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 KIAA1549Q9HCM3 1950 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 GTF3C1Q12789 2109 aa4.7□□□□□ -1.66
SMAD4-203ENST00000585448 THADAQ6YHU6 1953 aa4.69□□□□□ -1.66
SMAD4-203ENST00000585448 PCNX3Q9H6A9 2034 aa4.69□□□□□ -1.66
SMAD4-203ENST00000585448 MRPS12O15235 138 aaKnown RBP4.69□□□□□ -1.66
SMAD4-203ENST00000585448 SLC25A16P16260 332 aa4.69□□□□□ -1.66
SMAD4-203ENST00000585448 LOXL1Q08397 574 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-203ENST00000585448 SRSF9Q13242 221 aaKnown RBP eCLIP4.69□□□□□ -1.66
SMAD4-203ENST00000585448 ODF3L2Q3SX64 289 aa4.69□□□□□ -1.66
SMAD4-203ENST00000585448 FAM201AQ5SY85 155 aa4.69□□□□□ -1.66
SMAD4-203ENST00000585448 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
SMAD4-203ENST00000585448 C2orf82Q6UX34 121 aa4.69□□□□□ -1.66
SMAD4-203ENST00000585448 VN1R4Q7Z5H5 301 aa4.69□□□□□ -1.66
SMAD4-203ENST00000585448 ZNF329Q86UD4 541 aa4.69□□□□□ -1.66
SMAD4-203ENST00000585448 MDP1Q86V88 176 aa4.69□□□□□ -1.66
SMAD4-203ENST00000585448 SLC25A45Q8N413 288 aa4.69□□□□□ -1.66
SMAD4-203ENST00000585448 DSCR8Q96T75 97 aa4.69□□□□□ -1.66
SMAD4-203ENST00000585448 LSM7Q9UK45 103 aaKnown RBP4.69□□□□□ -1.66
SMAD4-203ENST00000585448 NCOA6Q14686 2063 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-203ENST00000585448 KIAA1549LQ6ZVL6 1849 aa4.69□□□□□ -1.66
SMAD4-203ENST00000585448 ARHGAP21Q5T5U3 1957 aa4.69□□□□□ -1.66
SMAD4-203ENST00000585448 TDRD6O60522 2096 aaKnown RBP4.68□□□□□ -1.66
SMAD4-203ENST00000585448 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 TRGV5A0A0B4J1U4 118 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 TRAV12-1A0A0B4J245 112 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 A0A0B4J2C4 111 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 TRGV8A0A0C4DH27 118 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 IGKV1-12A0A0C4DH73 117 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 UPK2O00526 184 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 IGKV1D-12P01611 117 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 STATHP02808 62 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 FGF12P61328 243 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 RPL18AQ02543 176 aaKnown RBP4.68□□□□□ -1.66
SMAD4-203ENST00000585448 PMAIP1Q13794 54 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 DEFB134Q4QY38 66 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 FAM104BQ5XKR9 115 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 ZNF497Q6ZNH5 498 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 SDIM1Q6ZPB5 146 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 LINC00311Q8N616 119 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 Q8N8P6 123 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 SSMEM1Q8WWF3 244 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 TSACCQ96A04 125 aaPredicted RBP4.68□□□□□ -1.66
SMAD4-203ENST00000585448 METTL26Q96S19 204 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 FOXC2Q99958 501 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 FAM173AQ9BQD7 235 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 UPK3BQ9BT76 320 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 PTPRSQ13332 1948 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 ATG2BQ96BY7 2078 aa4.68□□□□□ -1.66
SMAD4-203ENST00000585448 IGKV1-27A0A075B6S5 117 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-203ENST00000585448 IGKV1D-43A0A0B4J1Z2 117 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 TEX49A0A1B0GTD5 131 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 C15orf61A6NNL5 157 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 INS-IGF2F8WCM5 200 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 CCL16O15467 120 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 SPINT2O43291 252 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 LYZL6O75951 148 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 CFC1BP0CG36 223 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 CFC1P0CG37 223 aa4.67□□□□□ -1.66
SMAD4-203ENST00000585448 FKBP2P26885 142 aaKnown RBP4.67□□□□□ -1.66
SMAD4-203ENST00000585448 CDAP32320 146 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms