RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 RTL8CO15255 209 aa12.63□□□□□ -0.39
SRSF1-208ENST00000584773 NUDT3O95989 172 aa12.63□□□□□ -0.39
SRSF1-208ENST00000584773 FFAR4Q5NUL3 377 aa12.63□□□□□ -0.39
SRSF1-208ENST00000584773 PRR9Q5T870 116 aa12.63□□□□□ -0.39
SRSF1-208ENST00000584773 Q6ZQT7 251 aa12.63□□□□□ -0.39
SRSF1-208ENST00000584773 ZNF493Q6ZR52 646 aa12.63□□□□□ -0.39
SRSF1-208ENST00000584773 FAM19A4Q96LR4 140 aa12.63□□□□□ -0.39
SRSF1-208ENST00000584773 MRPL32Q9BYC8 188 aaKnown RBP12.63□□□□□ -0.39
SRSF1-208ENST00000584773 AAMDCQ9H7C9 122 aa12.63□□□□□ -0.39
SRSF1-208ENST00000584773 HERC2O95714 4834 aa12.63□□□□□ -0.39
SRSF1-208ENST00000584773 GAGE12BA1L429 117 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 C7orf71A4D174 169 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 C17orf112F2Z3M2 114 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 GAGE7O76087 117 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 GAGE12FP0CL80 117 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 GAGE12GP0CL81 117 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 GAGE12IP0CL82 117 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 PET100P0DJ07 73 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 CCDC28AQ8IWP9 274 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 C15orf53Q8NAA6 179 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 RNF141Q8WVD5 230 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 KCNIP2Q9NS61 270 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 PKHD1P08F94 4074 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 KLLNB2CW77 178 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 OR7C2O60412 319 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 SLC25A5P05141 298 aaKnown RBP12.62□□□□□ -0.39
SRSF1-208ENST00000584773 RNASE4P34096 147 aaKnown RBP12.62□□□□□ -0.39
SRSF1-208ENST00000584773 LINC00612Q8N6U2 182 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 Q8TAT8 98 aa12.62□□□□□ -0.39
SRSF1-208ENST00000584773 ZNF324O75467 553 aaPredicted RBP12.61□□□□□ -0.39
SRSF1-208ENST00000584773 LGALS9BQ3B8N2 356 aa12.61□□□□□ -0.39
SRSF1-208ENST00000584773 RNF212Q495C1 297 aa12.61□□□□□ -0.39
SRSF1-208ENST00000584773 Q6ZR54 194 aa12.61□□□□□ -0.39
SRSF1-208ENST00000584773 C9orf47Q6ZRZ4 202 aa12.61□□□□□ -0.39
SRSF1-208ENST00000584773 LINC00477Q96M19 166 aa12.61□□□□□ -0.39
SRSF1-208ENST00000584773 PYGO2Q9BRQ0 406 aa12.61□□□□□ -0.39
SRSF1-208ENST00000584773 KIAA1109Q2LD37 5005 aa12.6□□□□□ -0.39
SRSF1-208ENST00000584773 SNURFLB1AK76 121 aa12.6□□□□□ -0.39
SRSF1-208ENST00000584773 IFNA5P01569 189 aa12.6□□□□□ -0.39
SRSF1-208ENST00000584773 HOXA5P20719 270 aa12.6□□□□□ -0.39
SRSF1-208ENST00000584773 RANP62826 216 aaKnown RBP12.6□□□□□ -0.39
SRSF1-208ENST00000584773 UBE2L3P68036 154 aaKnown RBP12.6□□□□□ -0.39
SRSF1-208ENST00000584773 Q6ZTI0 123 aa12.6□□□□□ -0.39
SRSF1-208ENST00000584773 ZFAND2AQ8N6M9 145 aa12.6□□□□□ -0.39
SRSF1-208ENST00000584773 SCGB1C1Q8TD33 95 aa12.6□□□□□ -0.39
SRSF1-208ENST00000584773 GSN-AS1Q9NRJ2 163 aa12.6□□□□□ -0.39
SRSF1-208ENST00000584773 DYNC1H1Q14204 4646 aaKnown RBP12.59□□□□□ -0.39
SRSF1-208ENST00000584773 A0A0J9YY99 117 aa12.59□□□□□ -0.39
SRSF1-208ENST00000584773 A0A1B0GVY2 172 aa12.59□□□□□ -0.39
SRSF1-208ENST00000584773 CRISP2P16562 243 aa12.59□□□□□ -0.39
SRSF1-208ENST00000584773 OR5I1Q13606 314 aa12.59□□□□□ -0.39
SRSF1-208ENST00000584773 TMEM78Q5T7P6 136 aa12.59□□□□□ -0.39
SRSF1-208ENST00000584773 C11orf72Q8NBR9 251 aa12.59□□□□□ -0.39
SRSF1-208ENST00000584773 ATG101Q9BSB4 218 aa12.59□□□□□ -0.39
SRSF1-208ENST00000584773 Q9H3A6 140 aa12.59□□□□□ -0.39
SRSF1-208ENST00000584773 TMPRSS5Q9H3S3 457 aa12.59□□□□□ -0.39
SRSF1-208ENST00000584773 TP53TG3Q9ULZ0 132 aa12.59□□□□□ -0.39
SRSF1-208ENST00000584773 PKD1P98161 4303 aa12.58□□□□□ -0.39
SRSF1-208ENST00000584773 GPX1P07203 203 aa12.58□□□□□ -0.4
SRSF1-208ENST00000584773 LINC00336Q6ZUF6 198 aa12.58□□□□□ -0.4
SRSF1-208ENST00000584773 ZNF492Q9P255 531 aa12.58□□□□□ -0.4
SRSF1-208ENST00000584773 TRAV26-1A0A087WT03 109 aa12.57□□□□□ -0.4
SRSF1-208ENST00000584773 PRSS29PA6NIE9 313 aa12.57□□□□□ -0.4
SRSF1-208ENST00000584773 RAB2AP61019 212 aa12.57□□□□□ -0.4
SRSF1-208ENST00000584773 LINC00588Q9Y4M8 146 aa12.57□□□□□ -0.4
SRSF1-208ENST00000584773 KLF12Q9Y4X4 402 aa12.57□□□□□ -0.4
SRSF1-208ENST00000584773 HMGB3O15347 200 aaKnown RBP12.56□□□□□ -0.4
SRSF1-208ENST00000584773 PTTG1O95997 202 aa12.56□□□□□ -0.4
SRSF1-208ENST00000584773 DAZ2Q13117 558 aaKnown RBP12.56□□□□□ -0.4
SRSF1-208ENST00000584773 KHDC3LQ587J8 217 aa12.56□□□□□ -0.4
SRSF1-208ENST00000584773 Q5BKY6 102 aa12.56□□□□□ -0.4
SRSF1-208ENST00000584773 EIF4E3Q8N5X7 224 aaKnown RBP12.56□□□□□ -0.4
SRSF1-208ENST00000584773 DNAH11Q96DT5 4516 aa12.56□□□□□ -0.4
SRSF1-208ENST00000584773 ZNF138P52744 262 aa12.55□□□□□ -0.4
SRSF1-208ENST00000584773 ZNRF2Q8NHG8 242 aa12.55□□□□□ -0.4
SRSF1-208ENST00000584773 HYLS1Q96M11 299 aa12.55□□□□□ -0.4
SRSF1-208ENST00000584773 RPH3ALQ9UNE2 315 aa12.55□□□□□ -0.4
SRSF1-208ENST00000584773 TRGV1A0A0A0MS02 117 aa12.54□□□□□ -0.4
SRSF1-208ENST00000584773 RGS13O14921 159 aa12.54□□□□□ -0.4
SRSF1-208ENST00000584773 M6PRP20645 277 aa12.54□□□□□ -0.4
SRSF1-208ENST00000584773 ANXA2RQ3ZCQ2 193 aa12.54□□□□□ -0.4
SRSF1-208ENST00000584773 ZNF680Q8NEM1 530 aa12.54□□□□□ -0.4
SRSF1-208ENST00000584773 GNPNAT1Q96EK6 184 aaPredicted RBP12.54□□□□□ -0.4
SRSF1-208ENST00000584773 LINC00467Q9BRT7 94 aa12.54□□□□□ -0.4
SRSF1-208ENST00000584773 MED28Q9H204 178 aa12.54□□□□□ -0.4
SRSF1-208ENST00000584773 IGHV1OR15-1A0A075B7D0 117 aa12.53□□□□□ -0.4
SRSF1-208ENST00000584773 DIRC3C9JPN6 131 aa12.53□□□□□ -0.4
SRSF1-208ENST00000584773 CSN1S1P47710 185 aa12.53□□□□□ -0.4
SRSF1-208ENST00000584773 TAS2R45P59539 299 aa12.53□□□□□ -0.4
SRSF1-208ENST00000584773 ACOT6Q3I5F7 207 aaPredicted RBP12.53□□□□□ -0.4
SRSF1-208ENST00000584773 MUC21Q5SSG8 566 aa12.53□□□□□ -0.4
SRSF1-208ENST00000584773 HSD17B11Q8NBQ5 300 aa12.53□□□□□ -0.4
SRSF1-208ENST00000584773 MRPL16Q9NX20 251 aaKnown RBP12.53□□□□□ -0.4
SRSF1-208ENST00000584773 TRGV2A0A075B6R0 118 aa12.52□□□□□ -0.41
SRSF1-208ENST00000584773 NMBP08949 121 aa12.52□□□□□ -0.41
SRSF1-208ENST00000584773 TCL1AP56279 114 aa12.52□□□□□ -0.41
SRSF1-208ENST00000584773 SSX7Q7RTT5 188 aa12.52□□□□□ -0.41
SRSF1-208ENST00000584773 LYPD1Q8N2G4 141 aa12.52□□□□□ -0.41
SRSF1-208ENST00000584773 RXFP4Q8TDU9 374 aa12.52□□□□□ -0.41
SRSF1-208ENST00000584773 MUC4Q99102 2169 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms