RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 ERCC8Q13216 396 aa19.37■□□□□ 0.69
SMARCD2-210ENST00000584400 TMEM263Q8WUH6 116 aaKnown RBP19.37■□□□□ 0.69
SMARCD2-210ENST00000584400 GNPNAT1Q96EK6 184 aaPredicted RBP19.37■□□□□ 0.69
SMARCD2-210ENST00000584400 FAM210BQ96KR6 192 aa19.37■□□□□ 0.69
SMARCD2-210ENST00000584400 Q9H3A6 140 aa19.37■□□□□ 0.69
SMARCD2-210ENST00000584400 RNF222A6NCQ9 220 aa19.36■□□□□ 0.69
SMARCD2-210ENST00000584400 PRM2P04554 102 aa19.36■□□□□ 0.69
SMARCD2-210ENST00000584400 AZU1P20160 251 aa19.36■□□□□ 0.69
SMARCD2-210ENST00000584400 KIR3DS1Q14943 382 aa19.36■□□□□ 0.69
SMARCD2-210ENST00000584400 NDUFAF3Q9BU61 184 aa19.36■□□□□ 0.69
SMARCD2-210ENST00000584400 TRAV12-3A0A0B4J271 114 aa19.35■□□□□ 0.69
SMARCD2-210ENST00000584400 CDC34P49427 236 aaPredicted RBP19.35■□□□□ 0.69
SMARCD2-210ENST00000584400 PYGO2Q9BRQ0 406 aa19.35■□□□□ 0.69
SMARCD2-210ENST00000584400 TIMM8BQ9Y5J9 83 aaPredicted RBP19.35■□□□□ 0.69
SMARCD2-210ENST00000584400 SACSQ9NZJ4 4579 aa19.35■□□□□ 0.69
SMARCD2-210ENST00000584400 IGKV2-40A0A087WW87 121 aaPredicted RBP19.34■□□□□ 0.69
SMARCD2-210ENST00000584400 RBAKDNA6NC62 111 aa19.34■□□□□ 0.69
SMARCD2-210ENST00000584400 IGKV2D-40P01614 121 aaPredicted RBP19.34■□□□□ 0.69
SMARCD2-210ENST00000584400 FAM19A4Q96LR4 140 aa19.34■□□□□ 0.69
SMARCD2-210ENST00000584400 OTORQ9NRC9 128 aa19.34■□□□□ 0.69
SMARCD2-210ENST00000584400 TRBV7-9A0A0J9YWB2 115 aa19.33■□□□□ 0.68
SMARCD2-210ENST00000584400 C7orf71A4D174 169 aa19.33■□□□□ 0.68
SMARCD2-210ENST00000584400 KLLNB2CW77 178 aa19.33■□□□□ 0.68
SMARCD2-210ENST00000584400 TAAR5O14804 337 aa19.33■□□□□ 0.68
SMARCD2-210ENST00000584400 GPX1P07203 203 aa19.33■□□□□ 0.68
SMARCD2-210ENST00000584400 CRISP2P16562 243 aa19.33■□□□□ 0.68
SMARCD2-210ENST00000584400 CMTM2Q8TAZ6 248 aa19.33■□□□□ 0.68
SMARCD2-210ENST00000584400 RNASE8Q8TDE3 154 aaKnown RBP19.33■□□□□ 0.68
SMARCD2-210ENST00000584400 PLA2G2EQ9NZK7 142 aa19.33■□□□□ 0.68
SMARCD2-210ENST00000584400 ZNF492Q9P255 531 aa19.33■□□□□ 0.68
SMARCD2-210ENST00000584400 PLAC8L1A1L4L8 177 aa19.32■□□□□ 0.68
SMARCD2-210ENST00000584400 ZNF138P52744 262 aa19.32■□□□□ 0.68
SMARCD2-210ENST00000584400 ARPC5O15511 151 aa19.31■□□□□ 0.68
SMARCD2-210ENST00000584400 HTN3P15516 51 aa19.31■□□□□ 0.68
SMARCD2-210ENST00000584400 RPL7L1Q6DKI1 246 aaKnown RBP19.31■□□□□ 0.68
SMARCD2-210ENST00000584400 ARL6IP6Q8N6S5 226 aa19.31■□□□□ 0.68
SMARCD2-210ENST00000584400 LYSTQ99698 3801 aa19.31■□□□□ 0.68
SMARCD2-210ENST00000584400 VGLL1Q99990 258 aa19.31■□□□□ 0.68
SMARCD2-210ENST00000584400 ACTR3CQ9C0K3 210 aaPredicted RBP19.31■□□□□ 0.68
SMARCD2-210ENST00000584400 PGPA6NDG6 321 aa19.3■□□□□ 0.68
SMARCD2-210ENST00000584400 STAG3L2P0CL84 134 aa19.3■□□□□ 0.68
SMARCD2-210ENST00000584400 STAG3L3P0CL85 134 aa19.3■□□□□ 0.68
SMARCD2-210ENST00000584400 DEFB130BP0DP73 79 aa19.3■□□□□ 0.68
SMARCD2-210ENST00000584400 DEFB130AP0DP74 79 aa19.3■□□□□ 0.68
SMARCD2-210ENST00000584400 RAB24Q969Q5 203 aa19.3■□□□□ 0.68
SMARCD2-210ENST00000584400 SNURFLB1AK76 121 aa19.29■□□□□ 0.68
SMARCD2-210ENST00000584400 DIRC3C9JPN6 131 aa19.29■□□□□ 0.68
SMARCD2-210ENST00000584400 G3V3Q6 166 aa19.29■□□□□ 0.68
SMARCD2-210ENST00000584400 HMGB3O15347 200 aaKnown RBP19.29■□□□□ 0.68
SMARCD2-210ENST00000584400 EIF3GO75821 320 aaKnown RBP eCLIP19.29■□□□□ 0.68
SMARCD2-210ENST00000584400 RNASE4P34096 147 aaKnown RBP19.29■□□□□ 0.68
SMARCD2-210ENST00000584400 HYLS1Q96M11 299 aa19.29■□□□□ 0.68
SMARCD2-210ENST00000584400 SH3BGRL3Q9H299 93 aa19.29■□□□□ 0.68
SMARCD2-210ENST00000584400 ARL14EPLP0DKL9 152 aa19.28■□□□□ 0.68
SMARCD2-210ENST00000584400 NOP10Q9NPE3 64 aaKnown RBP19.28■□□□□ 0.68
SMARCD2-210ENST00000584400 LENEPQ9Y5L5 61 aa19.28■□□□□ 0.68
SMARCD2-210ENST00000584400 PLECQ15149 4684 aaKnown RBP19.27■□□□□ 0.68
SMARCD2-210ENST00000584400 CBY3A6NI87 242 aa19.27■□□□□ 0.68
SMARCD2-210ENST00000584400 BTN1A1Q13410 526 aa19.27■□□□□ 0.68
SMARCD2-210ENST00000584400 ZNF680Q8NEM1 530 aa19.27■□□□□ 0.68
SMARCD2-210ENST00000584400 LINC00467Q9BRT7 94 aa19.27■□□□□ 0.68
SMARCD2-210ENST00000584400 RYR2Q92736 4967 aa19.27■□□□□ 0.68
SMARCD2-210ENST00000584400 ZNF324O75467 553 aaPredicted RBP19.26■□□□□ 0.67
SMARCD2-210ENST00000584400 CXorf1O96002 111 aa19.26■□□□□ 0.67
SMARCD2-210ENST00000584400 ATP5G1P05496 136 aa19.26■□□□□ 0.67
SMARCD2-210ENST00000584400 P0DMU3 169 aa19.26■□□□□ 0.67
SMARCD2-210ENST00000584400 FAM231AP0DMU4 169 aa19.26■□□□□ 0.67
SMARCD2-210ENST00000584400 FAM231CP0DMU5 169 aa19.26■□□□□ 0.67
SMARCD2-210ENST00000584400 ATP5G3P48201 142 aa19.26■□□□□ 0.67
SMARCD2-210ENST00000584400 CD300CQ08708 224 aa19.26■□□□□ 0.67
SMARCD2-210ENST00000584400 ZFAND2AQ8N6M9 145 aa19.26■□□□□ 0.67
SMARCD2-210ENST00000584400 TMED6Q8WW62 240 aa19.26■□□□□ 0.67
SMARCD2-210ENST00000584400 TMEM167BQ9NRX6 74 aa19.26■□□□□ 0.67
SMARCD2-210ENST00000584400 EIF4E3Q8N5X7 224 aaKnown RBP19.25■□□□□ 0.67
SMARCD2-210ENST00000584400 ALMS1Q8TCU4 4167 aa19.24■□□□□ 0.67
SMARCD2-210ENST00000584400 GCHFRP30047 84 aa19.24■□□□□ 0.67
SMARCD2-210ENST00000584400 Q8TAT8 98 aa19.24■□□□□ 0.67
SMARCD2-210ENST00000584400 RGS13O14921 159 aa19.23■□□□□ 0.67
SMARCD2-210ENST00000584400 ZNF345Q14585 488 aa19.23■□□□□ 0.67
SMARCD2-210ENST00000584400 ANXA2RQ3ZCQ2 193 aa19.23■□□□□ 0.67
SMARCD2-210ENST00000584400 AKR1C8PQ5T2L2 129 aa19.23■□□□□ 0.67
SMARCD2-210ENST00000584400 ST6GAL2Q96JF0 529 aa19.23■□□□□ 0.67
SMARCD2-210ENST00000584400 RPH3ALQ9UNE2 315 aa19.23■□□□□ 0.67
SMARCD2-210ENST00000584400 DNAH1Q9P2D7 4330 aa19.23■□□□□ 0.67
SMARCD2-210ENST00000584400 SERTM2A0A1B0GWG4 89 aa19.22■□□□□ 0.67
SMARCD2-210ENST00000584400 DAZ2Q13117 558 aaKnown RBP19.22■□□□□ 0.67
SMARCD2-210ENST00000584400 SUN5Q8TC36 379 aa19.22■□□□□ 0.67
SMARCD2-210ENST00000584400 HMSDA8MTL9 139 aa19.21■□□□□ 0.67
SMARCD2-210ENST00000584400 SMLR1H3BR10 107 aa19.21■□□□□ 0.67
SMARCD2-210ENST00000584400 TMEM88Q6PEY1 159 aa19.21■□□□□ 0.67
SMARCD2-210ENST00000584400 C15orf53Q8NAA6 179 aa19.21■□□□□ 0.67
SMARCD2-210ENST00000584400 ARPC5LQ9BPX5 153 aa19.21■□□□□ 0.67
SMARCD2-210ENST00000584400 CTXND1A0A1B0GTU2 59 aa19.2■□□□□ 0.66
SMARCD2-210ENST00000584400 F5H768 121 aa19.2■□□□□ 0.66
SMARCD2-210ENST00000584400 K7EQM0 130 aa19.2■□□□□ 0.66
SMARCD2-210ENST00000584400 GOLT1AQ6ZVE7 132 aa19.2■□□□□ 0.66
SMARCD2-210ENST00000584400 KCNRGQ8N5I3 272 aa19.2■□□□□ 0.66
SMARCD2-210ENST00000584400 C5orf17Q8NAS9 161 aa19.2■□□□□ 0.66
SMARCD2-210ENST00000584400 IGHV1OR15-1A0A075B7D0 117 aa19.19■□□□□ 0.66
SMARCD2-210ENST00000584400 PRR9Q5T870 116 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms