RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 GGTLC3B5MD39 225 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 CD5LO43866 347 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 HSBP1O75506 76 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 HLA-DRB1P01911 266 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 PPBPP02775 128 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 CT45A6P0DMU7 189 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 CT45A5P0DMU8 189 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 CT45A7P0DMV0 189 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 HIST1H1EP10412 219 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 CEACAM3P40198 252 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 CA7P43166 264 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 FABP6P51161 128 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 UBE2G1P62253 170 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 ERHP84090 104 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 PAX2Q02962 417 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 RPL39P5Q59GN2 51 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 GDF5OSQ5U4N7 250 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 PATE2Q6UY27 113 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 SLC25A48Q6ZT89 311 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 DOLPP1Q86YN1 238 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 VKORC1L1Q8N0U8 176 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 ZCCHC24Q8N2G6 241 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 FAM19A2Q8N3H0 131 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 DEFB125Q8N687 156 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 TPRX1Q8N7U7 411 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 C8orf31Q8N9H6 132 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 GATD1Q8NB37 220 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 OR2Z1Q8NG97 314 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 OR4A5Q8NH83 315 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 LRRC29Q8WV35 223 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 C22orf15Q8WYQ4 148 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 GPR82Q96P67 336 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 PMCHL2Q9BQD1 86 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 TMEM70Q9BUB7 260 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 SLC25A2Q9BXI2 301 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 DEFB127Q9H1M4 99 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 PPDPFQ9H3Y8 114 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 NDUFA4L2Q9NRX3 87 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 CALYQ9NYX4 217 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 SPRR3Q9UBC9 169 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 EPDR1Q9UM22 224 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 AMMECR1Q9Y4X0 333 aaPredicted RBP2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 PKD1L2Q7Z442 2459 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 ASXL3Q9C0F0 2248 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 NCOR2Q9Y618 2525 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 BRWD1Q9NSI6 2320 aa2.85□□□□□ -1.95
SMCHD1-208ENST00000583344 CHD6Q8TD26 2715 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 KIAA2026Q5HYC2 2103 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 RTTNQ86VV8 2226 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 ARHGAP21Q5T5U3 1957 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 IGLV3-9A0A075B6K5 115 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 IGHV1-18A0A0C4DH31 117 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 TEX48A0A1B0GUV7 120 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 TCRBV4S1A1TA0A5B7 111 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 C19orf71A6NCJ1 209 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 SYS1-DBNDD2H3BUS1 97 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 K7EQG2 157 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 M0R2Z0 102 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 PEX7O00628 323 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 TAX1BP3O14907 124 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 OR7C2O60412 319 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 CECR9P0C854 216 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 SAA2P0DJI9 122 aaPredicted RBP2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 MGST1P10620 155 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 GLRXP35754 106 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 GNG10P50151 68 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 SUB1P53999 127 aaKnown RBP eCLIP2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 MEF2CQ06413 473 aaPredicted RBP2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 FXYD3Q14802 87 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 BATFQ16520 125 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 FAM120AOSQ5T036 256 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 MRPL54Q6P161 138 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 IGFL2Q6UWQ7 119 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 C12orf54Q6X4T0 127 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNF833PQ6ZTB9 187 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 SSX8Q7RTT4 187 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 LINC00311Q8N616 119 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 OR9G1Q8NH87 305 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 TMEM167AQ8TBQ9 72 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 ITLN1Q8WWA0 313 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 FXYD5Q96DB9 178 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 PAXXQ9BUH6 204 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 RPUSD1Q9UJJ7 312 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 ZNF835Q9Y2P0 537 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 SLC25A15Q9Y619 301 aa2.84□□□□□ -1.95
SMCHD1-208ENST00000583344 SPAG17Q6Q759 2223 aa2.84□□□□□ -1.96
SMCHD1-208ENST00000583344 ZNF292O60281 2723 aa2.84□□□□□ -1.96
SMCHD1-208ENST00000583344 USP24Q9UPU5 2620 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 SETXQ7Z333 2677 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 IGKV1D-37A0A075B6S9 117 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 TRAV5A0A0B4J249 113 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 A0A1B0GW15 77 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 OR4C46A6NHA9 309 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 H0Y9J4 135 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 SIVA1O15304 175 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 SPINK4O60575 86 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 LYZL6O75951 148 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 LEPROTL1O95214 131 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 LTAP01374 205 aa2.83□□□□□ -1.96
SMCHD1-208ENST00000583344 TFF1P04155 84 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms