RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 STOML3Q8TAV4 291 aa9.54□□□□□ -0.88
SS18-222ENST00000582792 C16orf92Q96LL3 132 aa9.54□□□□□ -0.88
SS18-222ENST00000582792 SLC50A1Q9BRV3 221 aa9.54□□□□□ -0.88
SS18-222ENST00000582792 SLC25A2Q9BXI2 301 aa9.54□□□□□ -0.88
SS18-222ENST00000582792 HERC1Q15751 4861 aa9.53□□□□□ -0.88
SS18-222ENST00000582792 A0A1W2PPV4 95 aa9.53□□□□□ -0.88
SS18-222ENST00000582792 A8MTW9 85 aa9.53□□□□□ -0.88
SS18-222ENST00000582792 PFDN1O60925 122 aa9.53□□□□□ -0.88
SS18-222ENST00000582792 SEC11BP0C7V7 166 aa9.53□□□□□ -0.88
SS18-222ENST00000582792 ZFP69Q49AA0 526 aa9.53□□□□□ -0.88
SS18-222ENST00000582792 KHDC3LQ587J8 217 aa9.53□□□□□ -0.88
SS18-222ENST00000582792 ZNRF2Q8NHG8 242 aa9.53□□□□□ -0.88
SS18-222ENST00000582792 SAT2Q96F10 170 aaPredicted RBP9.53□□□□□ -0.88
SS18-222ENST00000582792 IGF2BP2-AS1Q96M15 143 aa9.53□□□□□ -0.88
SS18-222ENST00000582792 TMEM208Q9BTX3 173 aa9.53□□□□□ -0.88
SS18-222ENST00000582792 OR51M1Q9H341 326 aa9.53□□□□□ -0.88
SS18-222ENST00000582792 RPRMQ9NS64 109 aa9.53□□□□□ -0.88
SS18-222ENST00000582792 DNAH5Q8TE73 4624 aa9.52□□□□□ -0.88
SS18-222ENST00000582792 TRAV8-2A0A0B4J237 113 aa9.52□□□□□ -0.89
SS18-222ENST00000582792 LYRM9A8MSI8 78 aa9.52□□□□□ -0.89
SS18-222ENST00000582792 RAB2AP61019 212 aa9.52□□□□□ -0.89
SS18-222ENST00000582792 AMTNQ6UX39 209 aa9.52□□□□□ -0.89
SS18-222ENST00000582792 PQLC2Q6ZP29 291 aa9.52□□□□□ -0.89
SS18-222ENST00000582792 Q8N1X5 172 aa9.52□□□□□ -0.89
SS18-222ENST00000582792 C20orf173Q96LM9 149 aa9.52□□□□□ -0.89
SS18-222ENST00000582792 PAXXQ9BUH6 204 aa9.52□□□□□ -0.89
SS18-222ENST00000582792 ZNF471Q9BX82 626 aaPredicted RBP9.52□□□□□ -0.89
SS18-222ENST00000582792 SH3BGRL3Q9H299 93 aa9.52□□□□□ -0.89
SS18-222ENST00000582792 ZNF331Q9NQX6 463 aaPredicted RBP9.52□□□□□ -0.89
SS18-222ENST00000582792 TRBV19A0A075B6N1 114 aa9.51□□□□□ -0.89
SS18-222ENST00000582792 H3BQ15 152 aa9.51□□□□□ -0.89
SS18-222ENST00000582792 TPT1P13693 172 aaKnown RBP9.51□□□□□ -0.89
SS18-222ENST00000582792 CDC34P49427 236 aaPredicted RBP9.51□□□□□ -0.89
SS18-222ENST00000582792 CD300CQ08708 224 aa9.51□□□□□ -0.89
SS18-222ENST00000582792 AKR1C8PQ5T2L2 129 aa9.51□□□□□ -0.89
SS18-222ENST00000582792 SLC51BQ86UW2 128 aa9.51□□□□□ -0.89
SS18-222ENST00000582792 BAP18Q8IXM2 172 aa9.51□□□□□ -0.89
SS18-222ENST00000582792 LRRC20Q8TCA0 184 aa9.51□□□□□ -0.89
SS18-222ENST00000582792 RNF141Q8WVD5 230 aa9.51□□□□□ -0.89
SS18-222ENST00000582792 MRPL53Q96EL3 112 aaKnown RBP9.51□□□□□ -0.89
SS18-222ENST00000582792 ACTR3CQ9C0K3 210 aaPredicted RBP9.51□□□□□ -0.89
SS18-222ENST00000582792 ZNF586Q9NXT0 402 aa9.51□□□□□ -0.89
SS18-222ENST00000582792 ZNF705GA8MUZ8 300 aaPredicted RBP9.5□□□□□ -0.89
SS18-222ENST00000582792 UMAD1C9J7I0 102 aa9.5□□□□□ -0.89
SS18-222ENST00000582792 PRM2P04554 102 aa9.5□□□□□ -0.89
SS18-222ENST00000582792 NBEAP1P0C6P0 100 aa9.5□□□□□ -0.89
SS18-222ENST00000582792 STAG3L2P0CL84 134 aa9.5□□□□□ -0.89
SS18-222ENST00000582792 STAG3L3P0CL85 134 aa9.5□□□□□ -0.89
SS18-222ENST00000582792 TSPOP30536 169 aa9.5□□□□□ -0.89
SS18-222ENST00000582792 PSG3Q16557 428 aa9.5□□□□□ -0.89
SS18-222ENST00000582792 FAM122CQ6P4D5 195 aa9.5□□□□□ -0.89
SS18-222ENST00000582792 C9orf62Q8N4C0 152 aa9.5□□□□□ -0.89
SS18-222ENST00000582792 PRELID1Q9Y255 219 aa9.5□□□□□ -0.89
SS18-222ENST00000582792 CTXND1A0A1B0GTU2 59 aa9.49□□□□□ -0.89
SS18-222ENST00000582792 CRXO43186 299 aaPredicted RBP9.49□□□□□ -0.89
SS18-222ENST00000582792 OR7C2O60412 319 aa9.49□□□□□ -0.89
SS18-222ENST00000582792 NUDT3O95989 172 aa9.49□□□□□ -0.89
SS18-222ENST00000582792 INSP01308 110 aa9.49□□□□□ -0.89
SS18-222ENST00000582792 DEFB130BP0DP73 79 aa9.49□□□□□ -0.89
SS18-222ENST00000582792 DEFB130AP0DP74 79 aa9.49□□□□□ -0.89
SS18-222ENST00000582792 PYYP10082 97 aa9.49□□□□□ -0.89
SS18-222ENST00000582792 CCL18P55774 89 aa9.49□□□□□ -0.89
SS18-222ENST00000582792 EIF5AL1Q6IS14 154 aaKnown RBP9.49□□□□□ -0.89
SS18-222ENST00000582792 DPPA3Q6W0C5 159 aa9.49□□□□□ -0.89
SS18-222ENST00000582792 LYPD1Q8N2G4 141 aa9.49□□□□□ -0.89
SS18-222ENST00000582792 SUN5Q8TC36 379 aa9.49□□□□□ -0.89
SS18-222ENST00000582792 RAB24Q969Q5 203 aa9.49□□□□□ -0.89
SS18-222ENST00000582792 FXYD5Q96DB9 178 aa9.49□□□□□ -0.89
SS18-222ENST00000582792 ZNF503Q96F45 646 aa9.49□□□□□ -0.89
SS18-222ENST00000582792 LINC00588Q9Y4M8 146 aa9.49□□□□□ -0.89
SS18-222ENST00000582792 PLAC8L1A1L4L8 177 aa9.48□□□□□ -0.89
SS18-222ENST00000582792 F5H768 121 aa9.48□□□□□ -0.89
SS18-222ENST00000582792 M0R2Z0 102 aa9.48□□□□□ -0.89
SS18-222ENST00000582792 NDUFB4O95168 129 aa9.48□□□□□ -0.89
SS18-222ENST00000582792 ATP5G1P05496 136 aa9.48□□□□□ -0.89
SS18-222ENST00000582792 ATP5G3P48201 142 aa9.48□□□□□ -0.89
SS18-222ENST00000582792 CNN1P51911 297 aaKnown RBP9.48□□□□□ -0.89
SS18-222ENST00000582792 SPINK13Q1W4C9 94 aa9.48□□□□□ -0.89
SS18-222ENST00000582792 SCRT2Q9NQ03 307 aa9.48□□□□□ -0.89
SS18-222ENST00000582792 SLC17A3O00476 420 aa9.47□□□□□ -0.89
SS18-222ENST00000582792 DUSP14O95147 198 aaKnown RBP9.47□□□□□ -0.89
SS18-222ENST00000582792 CXorf1O96002 111 aa9.47□□□□□ -0.89
SS18-222ENST00000582792 RAB5CP51148 216 aa9.47□□□□□ -0.89
SS18-222ENST00000582792 UBE2L3P68036 154 aaKnown RBP9.47□□□□□ -0.89
SS18-222ENST00000582792 SPATA12Q7Z6I5 190 aa9.47□□□□□ -0.89
SS18-222ENST00000582792 ARL6IP6Q8N6S5 226 aa9.47□□□□□ -0.89
SS18-222ENST00000582792 CBY3A6NI87 242 aa9.46□□□□□ -0.9
SS18-222ENST00000582792 AZU1P20160 251 aa9.46□□□□□ -0.9
SS18-222ENST00000582792 IGFL4Q6B9Z1 124 aa9.46□□□□□ -0.9
SS18-222ENST00000582792 ZNF738Q8NE65 137 aa9.46□□□□□ -0.9
SS18-222ENST00000582792 RPUSD4Q96CM3 377 aaKnown RBP9.46□□□□□ -0.9
SS18-222ENST00000582792 AAMDCQ9H7C9 122 aa9.46□□□□□ -0.9
SS18-222ENST00000582792 TMEM167BQ9NRX6 74 aa9.46□□□□□ -0.9
SS18-222ENST00000582792 H3BTX0 84 aa9.45□□□□□ -0.9
SS18-222ENST00000582792 OR10J4P0C629 311 aa9.45□□□□□ -0.9
SS18-222ENST00000582792 ARL14EPLP0DKL9 152 aa9.45□□□□□ -0.9
SS18-222ENST00000582792 GCHFRP30047 84 aa9.45□□□□□ -0.9
SS18-222ENST00000582792 ZNF726P1Q15940 193 aa9.45□□□□□ -0.9
SS18-222ENST00000582792 SSX7Q7RTT5 188 aa9.45□□□□□ -0.9
SS18-222ENST00000582792 RNF182Q8N6D2 247 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 1858.9 ms