RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PAX8Q06710 450 aa10.46□□□□□ -0.73
PCDHGB3-201ENST00000576222 PATE2Q6UY27 113 aa10.46□□□□□ -0.73
PCDHGB3-201ENST00000576222 NEU4Q8WWR8 484 aaPredicted RBP10.46□□□□□ -0.73
PCDHGB3-201ENST00000576222 IGHV3OR16-12A0A075B7B8 117 aa10.46□□□□□ -0.73
PCDHGB3-201ENST00000576222 VCYO14598 125 aa10.46□□□□□ -0.73
PCDHGB3-201ENST00000576222 PLEKHB2Q96CS7 222 aa10.46□□□□□ -0.73
PCDHGB3-201ENST00000576222 H3BRN7 92 aa10.46□□□□□ -0.74
PCDHGB3-201ENST00000576222 K7EM74 188 aa10.46□□□□□ -0.74
PCDHGB3-201ENST00000576222 RBX1P62877 108 aa10.46□□□□□ -0.74
PCDHGB3-201ENST00000576222 C2orf66Q6UXQ4 117 aa10.46□□□□□ -0.74
PCDHGB3-201ENST00000576222 IGKV1OR2-108A0A075B7D4 117 aa10.46□□□□□ -0.74
PCDHGB3-201ENST00000576222 CD28P10747 220 aa10.46□□□□□ -0.74
PCDHGB3-201ENST00000576222 CTRLP40313 264 aa10.46□□□□□ -0.74
PCDHGB3-201ENST00000576222 C1orf122Q6ZSJ8 110 aa10.46□□□□□ -0.74
PCDHGB3-201ENST00000576222 OR13C6PQ8NH95 151 aa10.46□□□□□ -0.74
PCDHGB3-201ENST00000576222 GTSF1Q8WW33 167 aa10.46□□□□□ -0.74
PCDHGB3-201ENST00000576222 DIAPH2-AS1Q14236 149 aa10.45□□□□□ -0.74
PCDHGB3-201ENST00000576222 SH2D6Q7Z4S9 175 aa10.45□□□□□ -0.74
PCDHGB3-201ENST00000576222 Q8TCH9 128 aa10.45□□□□□ -0.74
PCDHGB3-201ENST00000576222 KLRD1Q13241 179 aa10.45□□□□□ -0.74
PCDHGB3-201ENST00000576222 C9orf139Q6ZV77 190 aa10.45□□□□□ -0.74
PCDHGB3-201ENST00000576222 KLF12Q9Y4X4 402 aa10.45□□□□□ -0.74
PCDHGB3-201ENST00000576222 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.45□□□□□ -0.74
PCDHGB3-201ENST00000576222 F8VRH5 84 aa10.45□□□□□ -0.74
PCDHGB3-201ENST00000576222 IGLV1-44P01699 117 aa10.45□□□□□ -0.74
PCDHGB3-201ENST00000576222 CD59P13987 128 aa10.45□□□□□ -0.74
PCDHGB3-201ENST00000576222 LINC00311Q8N616 119 aa10.45□□□□□ -0.74
PCDHGB3-201ENST00000576222 TRBV25-1A0A075B6N4 114 aa10.45□□□□□ -0.74
PCDHGB3-201ENST00000576222 LINC00477Q96M19 166 aa10.45□□□□□ -0.74
PCDHGB3-201ENST00000576222 C17orf77Q96MU5 243 aa10.45□□□□□ -0.74
PCDHGB3-201ENST00000576222 RNASE1P07998 156 aaKnown RBP10.44□□□□□ -0.74
PCDHGB3-201ENST00000576222 ZNF672Q499Z4 452 aaPredicted RBP10.44□□□□□ -0.74
PCDHGB3-201ENST00000576222 DTX2Q86UW9 622 aa10.44□□□□□ -0.74
PCDHGB3-201ENST00000576222 PRADC1Q9BSG0 188 aa10.44□□□□□ -0.74
PCDHGB3-201ENST00000576222 IGKV3D-20A0A0C4DH25 116 aa10.44□□□□□ -0.74
PCDHGB3-201ENST00000576222 ADAMTS9Q9P2N4 1935 aa10.44□□□□□ -0.74
PCDHGB3-201ENST00000576222 IGKV3OR2-268A0A0C4DH90 116 aa10.44□□□□□ -0.74
PCDHGB3-201ENST00000576222 NDPQ00604 133 aa10.44□□□□□ -0.74
PCDHGB3-201ENST00000576222 EFNA4P52798 201 aa10.43□□□□□ -0.74
PCDHGB3-201ENST00000576222 DUX5Q96PT3 197 aa10.43□□□□□ -0.74
PCDHGB3-201ENST00000576222 G3V4G9 280 aa10.43□□□□□ -0.74
PCDHGB3-201ENST00000576222 WFDC12Q8WWY7 111 aa10.43□□□□□ -0.74
PCDHGB3-201ENST00000576222 ABHD17AQ96GS6 310 aa10.43□□□□□ -0.74
PCDHGB3-201ENST00000576222 TRAV26-2A0A0B4J265 109 aa10.43□□□□□ -0.74
PCDHGB3-201ENST00000576222 RRN3P1Q2M238 152 aa10.43□□□□□ -0.74
PCDHGB3-201ENST00000576222 IL17RELQ6ZVW7 336 aa10.43□□□□□ -0.74
PCDHGB3-201ENST00000576222 LINC00527Q9UJ94 153 aa10.43□□□□□ -0.74
PCDHGB3-201ENST00000576222 COL6A6A6NMZ7 2263 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 A0A0U1RRA0 63 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 IGLL5B9A064 214 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 HLA-DRB4P13762 266 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 ZNF48Q96MX3 618 aaPredicted RBP10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 HLA-DRB4X5D2U9 266 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 VMO1Q7Z5L0 202 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 BOD1L2Q8IYS8 172 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 GP9P14770 177 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 FXYD2P54710 66 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 SRSF6Q13247 344 aaKnown RBP10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 ZGRF1Q86YA3 2104 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 TRBV7-9A0A0J9YWB2 115 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 IGLV2-8P01709 118 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 BRWD1-AS2P59051 145 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 NPC2P61916 151 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 ZNF876PQ49A33 203 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 ZNF491Q8N8L2 437 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 ZNF503Q96F45 646 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 MED12LQ86YW9 2145 aa10.42□□□□□ -0.74
PCDHGB3-201ENST00000576222 TEX36Q5VZQ5 186 aa10.41□□□□□ -0.74
PCDHGB3-201ENST00000576222 FOXI2Q6ZQN5 318 aa10.41□□□□□ -0.74
PCDHGB3-201ENST00000576222 DUX3Q96PT4 197 aa10.41□□□□□ -0.74
PCDHGB3-201ENST00000576222 PCDH15Q96QU1 1955 aa10.41□□□□□ -0.74
PCDHGB3-201ENST00000576222 A0A087WX48 190 aa10.41□□□□□ -0.74
PCDHGB3-201ENST00000576222 OOSP1A8MZH6 123 aa10.41□□□□□ -0.74
PCDHGB3-201ENST00000576222 LOXP28300 417 aaPredicted RBP10.41□□□□□ -0.74
PCDHGB3-201ENST00000576222 WFDC2Q14508 124 aa10.41□□□□□ -0.74
PCDHGB3-201ENST00000576222 IGLV3-9A0A075B6K5 115 aa10.41□□□□□ -0.74
PCDHGB3-201ENST00000576222 SRD5A1P18405 259 aa10.41□□□□□ -0.74
PCDHGB3-201ENST00000576222 SMIM2Q9BVW6 85 aa10.41□□□□□ -0.74
PCDHGB3-201ENST00000576222 EGR2P11161 476 aaPredicted RBP10.41□□□□□ -0.74
PCDHGB3-201ENST00000576222 OR11H6Q8NGC7 330 aa10.41□□□□□ -0.74
PCDHGB3-201ENST00000576222 SPATA12Q7Z6I5 190 aa10.4□□□□□ -0.74
PCDHGB3-201ENST00000576222 TP53TG1Q9Y2A0 90 aa10.4□□□□□ -0.74
PCDHGB3-201ENST00000576222 TOMM7Q9P0U1 55 aa10.4□□□□□ -0.74
PCDHGB3-201ENST00000576222 TTTY13Q9BZ97 58 aa10.4□□□□□ -0.75
PCDHGB3-201ENST00000576222 MOB4Q9Y3A3 225 aa10.4□□□□□ -0.75
PCDHGB3-201ENST00000576222 GDF5OSQ5U4N7 250 aa10.39□□□□□ -0.75
PCDHGB3-201ENST00000576222 C22orf46C9J442 243 aa10.39□□□□□ -0.75
PCDHGB3-201ENST00000576222 MINOS1Q5TGZ0 78 aa10.39□□□□□ -0.75
PCDHGB3-201ENST00000576222 SPANXA1Q9NS26 97 aa10.39□□□□□ -0.75
PCDHGB3-201ENST00000576222 TP73-AS1Q9UF72 201 aa10.39□□□□□ -0.75
PCDHGB3-201ENST00000576222 MINOS1-NBL1R4GNA1 71 aa10.39□□□□□ -0.75
PCDHGB3-201ENST00000576222 PRR14LQ5THK1 2151 aa10.39□□□□□ -0.75
PCDHGB3-201ENST00000576222 TRAV41A0A0B4J266 112 aa10.39□□□□□ -0.75
PCDHGB3-201ENST00000576222 A0A1B0GXF2 115 aa10.39□□□□□ -0.75
PCDHGB3-201ENST00000576222 ZNF688P0C7X2 276 aa10.39□□□□□ -0.75
PCDHGB3-201ENST00000576222 PRO1854Q9UHT4 67 aa10.39□□□□□ -0.75
PCDHGB3-201ENST00000576222 A0A087WWL8 130 aa10.38□□□□□ -0.75
PCDHGB3-201ENST00000576222 TRBV7-1A0A0A6YYK4 115 aa10.38□□□□□ -0.75
PCDHGB3-201ENST00000576222 SHISA9B4DS77 424 aa10.38□□□□□ -0.75
PCDHGB3-201ENST00000576222 PROP1O75360 226 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms