RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 C5orf38Q86SI9 138 aa12.87□□□□□ -0.35
CACNA1A-202ENST00000573710 RPRMLQ8N4K4 120 aa12.87□□□□□ -0.35
CACNA1A-202ENST00000573710 BUB1B-PAK6H3BSN5 160 aa12.87□□□□□ -0.35
CACNA1A-202ENST00000573710 PINLYPA6NC86 204 aa12.87□□□□□ -0.35
CACNA1A-202ENST00000573710 F8W735 103 aaPredicted RBP12.87□□□□□ -0.35
CACNA1A-202ENST00000573710 FAM223BA6NKX1 122 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 ETV2O00321 342 aaPredicted RBP12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 FAM223AQ8IWN6 122 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 RPP25LQ8N5L8 163 aaKnown RBP12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 M0R1W7 72 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 HIST1H2BKO60814 126 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 HIST1H2BJP06899 126 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 HIST1H2BOP23527 126 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 HIST1H2BBP33778 126 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 HIST1H2BDP58876 126 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 HIST1H2BCP62807 126 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 HIST2H2BEQ16778 126 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 LYPD2Q6UXB3 125 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 HIST1H2BHQ93079 126 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 HIST1H2BNQ99877 126 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 HIST1H2BMQ99879 126 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 OSTCQ9NRP0 149 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 TMEM178BH3BS89 294 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 HCFC1P51610 2035 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 FAM231BA6NCW3 169 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 SMPXQ9UHP9 88 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 U3KQE9 123 aa12.86□□□□□ -0.35
CACNA1A-202ENST00000573710 NPBQ8NG41 125 aa12.85□□□□□ -0.35
CACNA1A-202ENST00000573710 ZNRD1Q9P1U0 126 aa12.85□□□□□ -0.35
CACNA1A-202ENST00000573710 SYS1-DBNDD2H3BUS1 97 aa12.85□□□□□ -0.35
CACNA1A-202ENST00000573710 B5MCH6 92 aa12.85□□□□□ -0.35
CACNA1A-202ENST00000573710 AMTNQ6UX39 209 aa12.85□□□□□ -0.35
CACNA1A-202ENST00000573710 C5orf64Q2M2E5 130 aa12.85□□□□□ -0.35
CACNA1A-202ENST00000573710 RFNGQ9Y644 331 aa12.85□□□□□ -0.35
CACNA1A-202ENST00000573710 IFITM2Q01629 132 aa12.84□□□□□ -0.35
CACNA1A-202ENST00000573710 LINC00479Q96M42 142 aa12.84□□□□□ -0.35
CACNA1A-202ENST00000573710 UBR3Q6ZT12 1888 aa12.84□□□□□ -0.35
CACNA1A-202ENST00000573710 F6UB75 175 aa12.84□□□□□ -0.35
CACNA1A-202ENST00000573710 VWA8A3KMH1 1905 aa12.84□□□□□ -0.35
CACNA1A-202ENST00000573710 IL18BPO95998 194 aa12.84□□□□□ -0.35
CACNA1A-202ENST00000573710 TMEM213A2RRL7 107 aa12.84□□□□□ -0.35
CACNA1A-202ENST00000573710 NPDC1Q9NQX5 325 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-202ENST00000573710 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-202ENST00000573710 TRAV13-2A0A0B4J235 113 aa12.84□□□□□ -0.35
CACNA1A-202ENST00000573710 IGKV2-29A2NJV5 120 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-202ENST00000573710 BAALC-AS2P0C853 105 aa12.84□□□□□ -0.35
CACNA1A-202ENST00000573710 HIST1H2BLQ99880 126 aa12.84□□□□□ -0.35
CACNA1A-202ENST00000573710 MSMBP08118 114 aa12.84□□□□□ -0.35
CACNA1A-202ENST00000573710 UBE2CO00762 179 aa12.83□□□□□ -0.35
CACNA1A-202ENST00000573710 CXCL1P09341 107 aa12.83□□□□□ -0.35
CACNA1A-202ENST00000573710 VSIG2Q96IQ7 327 aa12.83□□□□□ -0.35
CACNA1A-202ENST00000573710 IGHV4-30-2A0A087WSY4 118 aa12.83□□□□□ -0.36
CACNA1A-202ENST00000573710 CR1LQ2VPA4 569 aa12.83□□□□□ -0.36
CACNA1A-202ENST00000573710 SLC25A48Q6ZT89 311 aaKnown RBP12.83□□□□□ -0.36
CACNA1A-202ENST00000573710 C18orf12Q96KH6 178 aa12.83□□□□□ -0.36
CACNA1A-202ENST00000573710 AGRNO00468 2067 aa12.83□□□□□ -0.36
CACNA1A-202ENST00000573710 C9orf139Q6ZV77 190 aa12.83□□□□□ -0.36
CACNA1A-202ENST00000573710 GREM1O60565 184 aa12.83□□□□□ -0.36
CACNA1A-202ENST00000573710 WBP1Q96G27 269 aa12.83□□□□□ -0.36
CACNA1A-202ENST00000573710 TRAV9-1A0A075B6T8 112 aa12.83□□□□□ -0.36
CACNA1A-202ENST00000573710 C3orf22Q8N5N4 141 aa12.83□□□□□ -0.36
CACNA1A-202ENST00000573710 H3BMG7 143 aa12.82□□□□□ -0.36
CACNA1A-202ENST00000573710 TM2D1Q9BX74 207 aa12.82□□□□□ -0.36
CACNA1A-202ENST00000573710 IGKV1-27A0A075B6S5 117 aa12.82□□□□□ -0.36
CACNA1A-202ENST00000573710 MINOS1Q5TGZ0 78 aa12.82□□□□□ -0.36
CACNA1A-202ENST00000573710 MINOS1-NBL1R4GNA1 71 aa12.82□□□□□ -0.36
CACNA1A-202ENST00000573710 PARP14Q460N5 1801 aa12.82□□□□□ -0.36
CACNA1A-202ENST00000573710 FGFBP3Q8TAT2 258 aa12.82□□□□□ -0.36
CACNA1A-202ENST00000573710 J3QKU1 62 aa12.82□□□□□ -0.36
CACNA1A-202ENST00000573710 UBE2V1Q13404 147 aa12.82□□□□□ -0.36
CACNA1A-202ENST00000573710 LINC01551Q86U37 167 aa12.82□□□□□ -0.36
CACNA1A-202ENST00000573710 MLANAQ16655 118 aa12.82□□□□□ -0.36
CACNA1A-202ENST00000573710 FBLIM1Q8WUP2 373 aa12.81□□□□□ -0.36
CACNA1A-202ENST00000573710 PLA2G1BP04054 148 aaKnown RBP12.81□□□□□ -0.36
CACNA1A-202ENST00000573710 DEFB136Q30KP8 78 aa12.81□□□□□ -0.36
CACNA1A-202ENST00000573710 IGLV3-9A0A075B6K5 115 aa12.81□□□□□ -0.36
CACNA1A-202ENST00000573710 NREPQ16612 68 aa12.81□□□□□ -0.36
CACNA1A-202ENST00000573710 PRR30Q53SZ7 412 aaPredicted RBP12.81□□□□□ -0.36
CACNA1A-202ENST00000573710 ZNF664Q8N3J9 261 aa12.81□□□□□ -0.36
CACNA1A-202ENST00000573710 OTOGLQ3ZCN5 2332 aa12.81□□□□□ -0.36
CACNA1A-202ENST00000573710 CCL18P55774 89 aa12.81□□□□□ -0.36
CACNA1A-202ENST00000573710 FAM231DQ6ZW35 169 aa12.81□□□□□ -0.36
CACNA1A-202ENST00000573710 A0A087WWC5 75 aa12.81□□□□□ -0.36
CACNA1A-202ENST00000573710 WIPF3A6NGB9 483 aa12.81□□□□□ -0.36
CACNA1A-202ENST00000573710 C5orf24Q7Z6I8 188 aa12.81□□□□□ -0.36
CACNA1A-202ENST00000573710 SBF1O95248 1867 aa12.81□□□□□ -0.36
CACNA1A-202ENST00000573710 G3V318 75 aa12.8□□□□□ -0.36
CACNA1A-202ENST00000573710 ATP6V0E1O15342 81 aa12.8□□□□□ -0.36
CACNA1A-202ENST00000573710 ARTNQ5T4W7 220 aa12.8□□□□□ -0.36
CACNA1A-202ENST00000573710 A0A1B0GUS0 222 aa12.8□□□□□ -0.36
CACNA1A-202ENST00000573710 CT83Q5H943 113 aa12.8□□□□□ -0.36
CACNA1A-202ENST00000573710 RNF138Q8WVD3 245 aa12.8□□□□□ -0.36
CACNA1A-202ENST00000573710 CAMK2N2Q96S95 79 aa12.8□□□□□ -0.36
CACNA1A-202ENST00000573710 NDUFA12Q9UI09 145 aa12.8□□□□□ -0.36
CACNA1A-202ENST00000573710 SIPA1L3O60292 1781 aaPredicted RBP12.8□□□□□ -0.36
CACNA1A-202ENST00000573710 TRAV4A0A0B4J268 109 aa12.8□□□□□ -0.36
CACNA1A-202ENST00000573710 STRCP1A6NGW2 1772 aa12.8□□□□□ -0.36
CACNA1A-202ENST00000573710 IFITM3Q01628 133 aa12.8□□□□□ -0.36
CACNA1A-202ENST00000573710 HRCT1Q6UXD1 115 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms