RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 M0R2N4 97 aa12.54□□□□□ -0.4
CTDNEP1-207ENST00000572043 RNASE4P34096 147 aaKnown RBP12.54□□□□□ -0.4
CTDNEP1-207ENST00000572043 CD300CQ08708 224 aa12.54□□□□□ -0.4
CTDNEP1-207ENST00000572043 KMT2AQ03164 3969 aa12.53□□□□□ -0.4
CTDNEP1-207ENST00000572043 C7orf71A4D174 169 aa12.53□□□□□ -0.4
CTDNEP1-207ENST00000572043 CBY3A6NI87 242 aa12.53□□□□□ -0.4
CTDNEP1-207ENST00000572043 SLC25A5P05141 298 aaKnown RBP12.53□□□□□ -0.4
CTDNEP1-207ENST00000572043 ATP5G1P05496 136 aa12.53□□□□□ -0.4
CTDNEP1-207ENST00000572043 ATP5G3P48201 142 aa12.53□□□□□ -0.4
CTDNEP1-207ENST00000572043 KHDC3LQ587J8 217 aa12.53□□□□□ -0.4
CTDNEP1-207ENST00000572043 Q5BKY6 102 aa12.53□□□□□ -0.4
CTDNEP1-207ENST00000572043 TMEM78Q5T7P6 136 aa12.53□□□□□ -0.4
CTDNEP1-207ENST00000572043 Q8TAT8 98 aa12.53□□□□□ -0.4
CTDNEP1-207ENST00000572043 FAM19A4Q96LR4 140 aa12.53□□□□□ -0.4
CTDNEP1-207ENST00000572043 Q9H3A6 140 aa12.53□□□□□ -0.4
CTDNEP1-207ENST00000572043 IGLV2-18A0A075B6J9 118 aa12.52□□□□□ -0.41
CTDNEP1-207ENST00000572043 GAGE12BA1L429 117 aa12.52□□□□□ -0.41
CTDNEP1-207ENST00000572043 SNURFLB1AK76 121 aa12.52□□□□□ -0.41
CTDNEP1-207ENST00000572043 HMGB3O15347 200 aaKnown RBP12.52□□□□□ -0.41
CTDNEP1-207ENST00000572043 GAGE7O76087 117 aa12.52□□□□□ -0.41
CTDNEP1-207ENST00000572043 GAGE12FP0CL80 117 aa12.52□□□□□ -0.41
CTDNEP1-207ENST00000572043 GAGE12GP0CL81 117 aa12.52□□□□□ -0.41
CTDNEP1-207ENST00000572043 GAGE12IP0CL82 117 aa12.52□□□□□ -0.41
CTDNEP1-207ENST00000572043 TAS2R45P59539 299 aa12.52□□□□□ -0.41
CTDNEP1-207ENST00000572043 RAB2AP61019 212 aa12.52□□□□□ -0.41
CTDNEP1-207ENST00000572043 ACOT6Q3I5F7 207 aaPredicted RBP12.52□□□□□ -0.41
CTDNEP1-207ENST00000572043 C9orf47Q6ZRZ4 202 aa12.52□□□□□ -0.41
CTDNEP1-207ENST00000572043 PYGO2Q9BRQ0 406 aa12.52□□□□□ -0.41
CTDNEP1-207ENST00000572043 KLLNB2CW77 178 aa12.51□□□□□ -0.41
CTDNEP1-207ENST00000572043 NUDT3O95989 172 aa12.51□□□□□ -0.41
CTDNEP1-207ENST00000572043 GPX1P07203 203 aa12.51□□□□□ -0.41
CTDNEP1-207ENST00000572043 CSN1S1P47710 185 aa12.51□□□□□ -0.41
CTDNEP1-207ENST00000572043 PRR9Q5T870 116 aa12.51□□□□□ -0.41
CTDNEP1-207ENST00000572043 Q6ZQT7 251 aa12.51□□□□□ -0.41
CTDNEP1-207ENST00000572043 HSD17B11Q8NBQ5 300 aa12.51□□□□□ -0.41
CTDNEP1-207ENST00000572043 HYLS1Q96M11 299 aa12.51□□□□□ -0.41
CTDNEP1-207ENST00000572043 RPH3ALQ9UNE2 315 aa12.51□□□□□ -0.41
CTDNEP1-207ENST00000572043 BIRC6Q9NR09 4857 aa12.5□□□□□ -0.41
CTDNEP1-207ENST00000572043 A0A1W2PPV4 95 aa12.5□□□□□ -0.41
CTDNEP1-207ENST00000572043 M6PRP20645 277 aa12.5□□□□□ -0.41
CTDNEP1-207ENST00000572043 ZFAND2AQ8N6M9 145 aa12.5□□□□□ -0.41
CTDNEP1-207ENST00000572043 GSN-AS1Q9NRJ2 163 aa12.5□□□□□ -0.41
CTDNEP1-207ENST00000572043 ZNF492Q9P255 531 aa12.5□□□□□ -0.41
CTDNEP1-207ENST00000572043 ZNF324O75467 553 aaPredicted RBP12.49□□□□□ -0.41
CTDNEP1-207ENST00000572043 ZNF138P52744 262 aa12.49□□□□□ -0.41
CTDNEP1-207ENST00000572043 OR5I1Q13606 314 aa12.49□□□□□ -0.41
CTDNEP1-207ENST00000572043 C15orf53Q8NAA6 179 aa12.49□□□□□ -0.41
CTDNEP1-207ENST00000572043 OR10G4Q8NGN3 311 aa12.49□□□□□ -0.41
CTDNEP1-207ENST00000572043 OR10G9Q8NGN4 311 aa12.49□□□□□ -0.41
CTDNEP1-207ENST00000572043 OR10G7Q8NGN6 311 aa12.49□□□□□ -0.41
CTDNEP1-207ENST00000572043 RGS13O14921 159 aa12.48□□□□□ -0.41
CTDNEP1-207ENST00000572043 GIPP09681 153 aaPredicted RBP12.48□□□□□ -0.41
CTDNEP1-207ENST00000572043 CRISP2P16562 243 aa12.48□□□□□ -0.41
CTDNEP1-207ENST00000572043 ZNF266Q14584 549 aa12.48□□□□□ -0.41
CTDNEP1-207ENST00000572043 LYPD1Q8N2G4 141 aa12.48□□□□□ -0.41
CTDNEP1-207ENST00000572043 AQP10Q96PS8 301 aa12.48□□□□□ -0.41
CTDNEP1-207ENST00000572043 ATG101Q9BSB4 218 aa12.48□□□□□ -0.41
CTDNEP1-207ENST00000572043 VPS13DQ5THJ4 4388 aa12.47□□□□□ -0.41
CTDNEP1-207ENST00000572043 FXYD6-FXYD2A0A087WZ82 144 aa12.47□□□□□ -0.41
CTDNEP1-207ENST00000572043 PGPA6NDG6 321 aa12.47□□□□□ -0.41
CTDNEP1-207ENST00000572043 RGS21Q2M5E4 152 aa12.47□□□□□ -0.41
CTDNEP1-207ENST00000572043 Q6ZTI0 123 aa12.47□□□□□ -0.41
CTDNEP1-207ENST00000572043 EIF4E3Q8N5X7 224 aaKnown RBP12.47□□□□□ -0.41
CTDNEP1-207ENST00000572043 LINC00612Q8N6U2 182 aa12.47□□□□□ -0.41
CTDNEP1-207ENST00000572043 TP53TG3Q9ULZ0 132 aa12.47□□□□□ -0.41
CTDNEP1-207ENST00000572043 A0A0J9YY99 117 aa12.46□□□□□ -0.41
CTDNEP1-207ENST00000572043 DIRC3C9JPN6 131 aa12.46□□□□□ -0.41
CTDNEP1-207ENST00000572043 ATP6V0CP27449 155 aa12.46□□□□□ -0.41
CTDNEP1-207ENST00000572043 C11orf72Q8NBR9 251 aa12.46□□□□□ -0.41
CTDNEP1-207ENST00000572043 ZNF680Q8NEM1 530 aa12.46□□□□□ -0.41
CTDNEP1-207ENST00000572043 CMTM2Q8TAZ6 248 aa12.46□□□□□ -0.41
CTDNEP1-207ENST00000572043 SH3BGRL3Q9H299 93 aa12.46□□□□□ -0.41
CTDNEP1-207ENST00000572043 TMPRSS5Q9H3S3 457 aa12.46□□□□□ -0.41
CTDNEP1-207ENST00000572043 KLF12Q9Y4X4 402 aa12.46□□□□□ -0.41
CTDNEP1-207ENST00000572043 TRGV1A0A0A0MS02 117 aa12.45□□□□□ -0.42
CTDNEP1-207ENST00000572043 NMBP08949 121 aa12.45□□□□□ -0.42
CTDNEP1-207ENST00000572043 HOXA5P20719 270 aa12.45□□□□□ -0.42
CTDNEP1-207ENST00000572043 CDC34P49427 236 aaPredicted RBP12.45□□□□□ -0.42
CTDNEP1-207ENST00000572043 DAZ2Q13117 558 aaKnown RBP12.45□□□□□ -0.42
CTDNEP1-207ENST00000572043 RNF212Q495C1 297 aa12.45□□□□□ -0.42
CTDNEP1-207ENST00000572043 MUC21Q5SSG8 566 aa12.45□□□□□ -0.42
CTDNEP1-207ENST00000572043 PQLC2Q6ZP29 291 aa12.45□□□□□ -0.42
CTDNEP1-207ENST00000572043 INO80EQ8NBZ0 244 aaPredicted RBP12.45□□□□□ -0.42
CTDNEP1-207ENST00000572043 RXFP4Q8TDU9 374 aa12.45□□□□□ -0.42
CTDNEP1-207ENST00000572043 OTORQ9NRC9 128 aa12.45□□□□□ -0.42
CTDNEP1-207ENST00000572043 TRGV2A0A075B6R0 118 aa12.44□□□□□ -0.42
CTDNEP1-207ENST00000572043 IGHV1OR15-1A0A075B7D0 117 aa12.44□□□□□ -0.42
CTDNEP1-207ENST00000572043 TRAV26-1A0A087WT03 109 aa12.44□□□□□ -0.42
CTDNEP1-207ENST00000572043 RBAKDNA6NC62 111 aa12.44□□□□□ -0.42
CTDNEP1-207ENST00000572043 ARL14EPLP0DKL9 152 aa12.44□□□□□ -0.42
CTDNEP1-207ENST00000572043 GNG5P63218 68 aa12.44□□□□□ -0.42
CTDNEP1-207ENST00000572043 ANXA2RQ3ZCQ2 193 aa12.44□□□□□ -0.42
CTDNEP1-207ENST00000572043 OR2T35Q8NGX2 323 aa12.44□□□□□ -0.42
CTDNEP1-207ENST00000572043 ARPC5LQ9BPX5 153 aa12.44□□□□□ -0.42
CTDNEP1-207ENST00000572043 LINC00467Q9BRT7 94 aa12.44□□□□□ -0.42
CTDNEP1-207ENST00000572043 FAM74A1Q5RGS3 127 aa12.43□□□□□ -0.42
CTDNEP1-207ENST00000572043 RPL7L1Q6DKI1 246 aaKnown RBP12.43□□□□□ -0.42
CTDNEP1-207ENST00000572043 GOLT1AQ6ZVE7 132 aa12.43□□□□□ -0.42
CTDNEP1-207ENST00000572043 OR2G3Q8NGZ4 309 aa12.43□□□□□ -0.42
CTDNEP1-207ENST00000572043 GNPNAT1Q96EK6 184 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms