RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 GDF5OSQ5U4N7 250 aa10.94□□□□□ -0.66
SPG7-213ENST00000566221 CYB561D1Q8N8Q1 229 aa10.94□□□□□ -0.66
SPG7-213ENST00000566221 ATG101Q9BSB4 218 aa10.94□□□□□ -0.66
SPG7-213ENST00000566221 TUBA4BQ9H853 241 aa10.94□□□□□ -0.66
SPG7-213ENST00000566221 EPDR1Q9UM22 224 aa10.94□□□□□ -0.66
SPG7-213ENST00000566221 IGKV2-40A0A087WW87 121 aaPredicted RBP10.93□□□□□ -0.66
SPG7-213ENST00000566221 FBLL1A6NHQ2 334 aaKnown RBP10.93□□□□□ -0.66
SPG7-213ENST00000566221 NPIPB6E9PJ23 425 aa10.93□□□□□ -0.66
SPG7-213ENST00000566221 H3BMM0 161 aa10.93□□□□□ -0.66
SPG7-213ENST00000566221 K7EQM0 130 aa10.93□□□□□ -0.66
SPG7-213ENST00000566221 PEX7O00628 323 aa10.93□□□□□ -0.66
SPG7-213ENST00000566221 IGKV2D-40P01614 121 aaPredicted RBP10.93□□□□□ -0.66
SPG7-213ENST00000566221 TCRAP04437 139 aa10.93□□□□□ -0.66
SPG7-213ENST00000566221 IGHV4-30-4P0DP06 118 aa10.93□□□□□ -0.66
SPG7-213ENST00000566221 CNN1P51911 297 aaKnown RBP10.93□□□□□ -0.66
SPG7-213ENST00000566221 GOLT1AQ6ZVE7 132 aa10.93□□□□□ -0.66
SPG7-213ENST00000566221 TRPT1Q86TN4 253 aaKnown RBP10.93□□□□□ -0.66
SPG7-213ENST00000566221 CLUHP3Q96NS8 147 aa10.93□□□□□ -0.66
SPG7-213ENST00000566221 A8MTW9 85 aa10.92□□□□□ -0.66
SPG7-213ENST00000566221 A8MZ25 164 aa10.92□□□□□ -0.66
SPG7-213ENST00000566221 K7EIL1 84 aa10.92□□□□□ -0.66
SPG7-213ENST00000566221 ZNF705DP0CH99 300 aaPredicted RBP10.92□□□□□ -0.66
SPG7-213ENST00000566221 ZNF705BP0CI00 300 aaPredicted RBP10.92□□□□□ -0.66
SPG7-213ENST00000566221 OR4B1Q8NGF8 309 aa10.92□□□□□ -0.66
SPG7-213ENST00000566221 NBEAL2Q6ZNJ1 2754 aa10.91□□□□□ -0.66
SPG7-213ENST00000566221 ZNF727A8MUV8 499 aa10.91□□□□□ -0.66
SPG7-213ENST00000566221 PRB4P10163 310 aaPredicted RBP10.91□□□□□ -0.66
SPG7-213ENST00000566221 TAS2R60P59551 318 aa10.91□□□□□ -0.66
SPG7-213ENST00000566221 PNRC1Q12796 327 aaPredicted RBP10.91□□□□□ -0.66
SPG7-213ENST00000566221 TMEM78Q5T7P6 136 aa10.91□□□□□ -0.66
SPG7-213ENST00000566221 C9orf47Q6ZRZ4 202 aa10.91□□□□□ -0.66
SPG7-213ENST00000566221 SVBPQ8N300 66 aa10.91□□□□□ -0.66
SPG7-213ENST00000566221 NIPSNAP3BQ9BS92 247 aa10.91□□□□□ -0.66
SPG7-213ENST00000566221 KLF12Q9Y4X4 402 aa10.91□□□□□ -0.66
SPG7-213ENST00000566221 LOC102724200A0A096LPH7 203 aaPredicted RBP10.9□□□□□ -0.66
SPG7-213ENST00000566221 SCO2A0A1W2PP80 73 aa10.9□□□□□ -0.66
SPG7-213ENST00000566221 C9JCJ5 164 aa10.9□□□□□ -0.66
SPG7-213ENST00000566221 AKR1C3P42330 323 aa10.9□□□□□ -0.66
SPG7-213ENST00000566221 TMEM241Q24JQ0 296 aa10.9□□□□□ -0.66
SPG7-213ENST00000566221 TMEM75Q8N9X5 138 aa10.9□□□□□ -0.66
SPG7-213ENST00000566221 C2CD4CQ8TF44 421 aa10.9□□□□□ -0.66
SPG7-213ENST00000566221 LINC00477Q96M19 166 aa10.9□□□□□ -0.66
SPG7-213ENST00000566221 ODF3Q96PU9 254 aa10.9□□□□□ -0.66
SPG7-213ENST00000566221 VGLL1Q99990 258 aa10.9□□□□□ -0.66
SPG7-213ENST00000566221 SMIM7Q9BQ49 75 aa10.9□□□□□ -0.66
SPG7-213ENST00000566221 PARLQ9H300 379 aa10.9□□□□□ -0.66
SPG7-213ENST00000566221 PPP1R14DQ9NXH3 145 aa10.9□□□□□ -0.66
SPG7-213ENST00000566221 LY96Q9Y6Y9 160 aa10.9□□□□□ -0.66
SPG7-213ENST00000566221 TRBV6-1A0A0K0K1D8 114 aa10.89□□□□□ -0.67
SPG7-213ENST00000566221 IGKV3-20P01619 116 aa10.89□□□□□ -0.67
SPG7-213ENST00000566221 RPL35AP18077 110 aaKnown RBP10.89□□□□□ -0.67
SPG7-213ENST00000566221 ADCYAP1P18509 176 aa10.89□□□□□ -0.67
SPG7-213ENST00000566221 CEBPGP53567 150 aa10.89□□□□□ -0.67
SPG7-213ENST00000566221 NUTF2P61970 127 aaKnown RBP10.89□□□□□ -0.67
SPG7-213ENST00000566221 ERCC8Q13216 396 aa10.89□□□□□ -0.67
SPG7-213ENST00000566221 MORN3Q6PF18 240 aaPredicted RBP10.89□□□□□ -0.67
SPG7-213ENST00000566221 SMIM12Q96EX1 92 aa10.89□□□□□ -0.67
SPG7-213ENST00000566221 FMC1Q96HJ9 113 aa10.89□□□□□ -0.67
SPG7-213ENST00000566221 AGPAT4-IT1Q9H0P7 198 aa10.89□□□□□ -0.67
SPG7-213ENST00000566221 NAT8Q9UHE5 227 aa10.89□□□□□ -0.67
SPG7-213ENST00000566221 KIR2DL5BA0A0G2JN68 375 aa10.88□□□□□ -0.67
SPG7-213ENST00000566221 KIR2DL5BA0A0G2JPC4 375 aa10.88□□□□□ -0.67
SPG7-213ENST00000566221 RBMY1BA6NDE4 496 aaKnown RBP10.88□□□□□ -0.67
SPG7-213ENST00000566221 RBMY1EA6NEQ0 496 aaKnown RBP10.88□□□□□ -0.67
SPG7-213ENST00000566221 SNAPINO95295 136 aa10.88□□□□□ -0.67
SPG7-213ENST00000566221 APOC3P02656 99 aa10.88□□□□□ -0.67
SPG7-213ENST00000566221 RBMY1DP0C7P1 496 aaKnown RBP10.88□□□□□ -0.67
SPG7-213ENST00000566221 RPL35P42766 123 aaKnown RBP10.88□□□□□ -0.67
SPG7-213ENST00000566221 ZNF138P52744 262 aa10.88□□□□□ -0.67
SPG7-213ENST00000566221 APOC4P55056 127 aa10.88□□□□□ -0.67
SPG7-213ENST00000566221 UBE2G1P62253 170 aa10.88□□□□□ -0.67
SPG7-213ENST00000566221 TMEM183BQ1AE95 376 aa10.88□□□□□ -0.67
SPG7-213ENST00000566221 AMTNQ6UX39 209 aa10.88□□□□□ -0.67
SPG7-213ENST00000566221 KIR2DL5AQ8N109 375 aa10.88□□□□□ -0.67
SPG7-213ENST00000566221 KIR2DL5BQ8NHK3 375 aa10.88□□□□□ -0.67
SPG7-213ENST00000566221 TVP23CQ96ET8 276 aa10.88□□□□□ -0.67
SPG7-213ENST00000566221 ZNF492Q9P255 531 aa10.88□□□□□ -0.67
SPG7-213ENST00000566221 TRAV8-1A0A0A6YYK1 113 aa10.87□□□□□ -0.67
SPG7-213ENST00000566221 TRBV7-9A0A0J9YWB2 115 aa10.87□□□□□ -0.67
SPG7-213ENST00000566221 B4DEV8 164 aa10.87□□□□□ -0.67
SPG7-213ENST00000566221 AMBPP02760 352 aa10.87□□□□□ -0.67
SPG7-213ENST00000566221 FRMD6-AS1P0C7T7 363 aa10.87□□□□□ -0.67
SPG7-213ENST00000566221 CT45A10P0DMU9 189 aa10.87□□□□□ -0.67
SPG7-213ENST00000566221 TSPOP30536 169 aa10.87□□□□□ -0.67
SPG7-213ENST00000566221 LEPP41159 167 aa10.87□□□□□ -0.67
SPG7-213ENST00000566221 FLI1Q01543 452 aaPredicted RBP10.87□□□□□ -0.67
SPG7-213ENST00000566221 LINC00322Q6ZN03 302 aaPredicted RBP10.87□□□□□ -0.67
SPG7-213ENST00000566221 Q86TA4 180 aa10.87□□□□□ -0.67
SPG7-213ENST00000566221 Q8TAT8 98 aa10.87□□□□□ -0.67
SPG7-213ENST00000566221 MRAPQ8TCY5 172 aa10.87□□□□□ -0.67
SPG7-213ENST00000566221 NDFIP1Q9BT67 221 aa10.87□□□□□ -0.67
SPG7-213ENST00000566221 LENEPQ9Y5L5 61 aa10.87□□□□□ -0.67
SPG7-213ENST00000566221 TRAV34A0A0B4J273 112 aa10.86□□□□□ -0.67
SPG7-213ENST00000566221 IGLV2-11P01706 119 aa10.86□□□□□ -0.67
SPG7-213ENST00000566221 ZNF674Q2M3X9 581 aa10.86□□□□□ -0.67
SPG7-213ENST00000566221 DEFB121Q5J5C9 76 aa10.86□□□□□ -0.67
SPG7-213ENST00000566221 C1QTNF4Q9BXJ3 329 aa10.86□□□□□ -0.67
SPG7-213ENST00000566221 SDF2L1Q9HCN8 221 aa10.86□□□□□ -0.67
SPG7-213ENST00000566221 BIN3Q9NQY0 253 aa10.86□□□□□ -0.67
SPG7-213ENST00000566221 PSG8Q9UQ74 426 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms