RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 A0A0B4J2A0 478 aa10.57□□□□□ -0.72
CLK3-217ENST00000566126 IGHV3-16A0A0C4DH30 117 aa10.57□□□□□ -0.72
CLK3-217ENST00000566126 GPX1P07203 203 aa10.57□□□□□ -0.72
CLK3-217ENST00000566126 AKR1C4P17516 323 aa10.57□□□□□ -0.72
CLK3-217ENST00000566126 FFAR4Q5NUL3 377 aa10.57□□□□□ -0.72
CLK3-217ENST00000566126 CROCCP3Q8IVE0 287 aa10.57□□□□□ -0.72
CLK3-217ENST00000566126 ZFAND2AQ8N6M9 145 aa10.57□□□□□ -0.72
CLK3-217ENST00000566126 AGPAT4-IT1Q9H0P7 198 aa10.57□□□□□ -0.72
CLK3-217ENST00000566126 SHPKQ9UHJ6 478 aa10.57□□□□□ -0.72
CLK3-217ENST00000566126 IGKV2D-24A0A075B6R9 120 aa10.56□□□□□ -0.72
CLK3-217ENST00000566126 TRAV8-1A0A0A6YYK1 113 aa10.56□□□□□ -0.72
CLK3-217ENST00000566126 GGTLC3B5MD39 225 aa10.56□□□□□ -0.72
CLK3-217ENST00000566126 PITX3O75364 302 aa10.56□□□□□ -0.72
CLK3-217ENST00000566126 TBPP20226 339 aa10.56□□□□□ -0.72
CLK3-217ENST00000566126 S100A7AQ86SG5 101 aa10.56□□□□□ -0.72
CLK3-217ENST00000566126 BPIFA4PQ86YQ2 179 aa10.56□□□□□ -0.72
CLK3-217ENST00000566126 OR4C5Q8NGB2 326 aa10.56□□□□□ -0.72
CLK3-217ENST00000566126 RMI2Q96E14 147 aa10.56□□□□□ -0.72
CLK3-217ENST00000566126 SMIM31A0A1B0GVY4 71 aa10.55□□□□□ -0.72
CLK3-217ENST00000566126 RPS19P39019 145 aaKnown RBP10.55□□□□□ -0.72
CLK3-217ENST00000566126 FAM122CQ6P4D5 195 aa10.55□□□□□ -0.72
CLK3-217ENST00000566126 LINC00305Q7Z4B0 112 aa10.55□□□□□ -0.72
CLK3-217ENST00000566126 LINC00477Q96M19 166 aa10.55□□□□□ -0.72
CLK3-217ENST00000566126 GTSF1LQ9H1H1 148 aa10.55□□□□□ -0.72
CLK3-217ENST00000566126 RNF24Q9Y225 148 aa10.55□□□□□ -0.72
CLK3-217ENST00000566126 M0R3E3 92 aa10.54□□□□□ -0.72
CLK3-217ENST00000566126 SELENOTP62341 195 aa10.54□□□□□ -0.72
CLK3-217ENST00000566126 SLC25A29Q8N8R3 303 aa10.54□□□□□ -0.72
CLK3-217ENST00000566126 OR52I2Q8NH67 350 aa10.54□□□□□ -0.72
CLK3-217ENST00000566126 GPR132Q9UNW8 380 aa10.54□□□□□ -0.72
CLK3-217ENST00000566126 SMCO3A2RU48 225 aa10.53□□□□□ -0.72
CLK3-217ENST00000566126 FABP12A6NFH5 140 aa10.53□□□□□ -0.72
CLK3-217ENST00000566126 NMBP08949 121 aa10.53□□□□□ -0.72
CLK3-217ENST00000566126 GABARAPL2P60520 117 aa10.53□□□□□ -0.72
CLK3-217ENST00000566126 FAAP20Q6NZ36 180 aa10.53□□□□□ -0.72
CLK3-217ENST00000566126 NRG4Q8WWG1 115 aa10.53□□□□□ -0.72
CLK3-217ENST00000566126 SPXQ9BT56 116 aa10.53□□□□□ -0.72
CLK3-217ENST00000566126 RAB3DO95716 219 aa10.52□□□□□ -0.73
CLK3-217ENST00000566126 APOA1P02647 267 aa10.52□□□□□ -0.73
CLK3-217ENST00000566126 SURF2Q15527 256 aaPredicted RBP10.52□□□□□ -0.73
CLK3-217ENST00000566126 MUC21Q5SSG8 566 aa10.52□□□□□ -0.73
CLK3-217ENST00000566126 WDR73Q6P4I2 378 aa10.52□□□□□ -0.73
CLK3-217ENST00000566126 CNBD2Q96M20 576 aa10.52□□□□□ -0.73
CLK3-217ENST00000566126 MTFP1Q9UDX5 166 aa10.52□□□□□ -0.73
CLK3-217ENST00000566126 RPP30P78346 268 aaKnown RBP10.51□□□□□ -0.73
CLK3-217ENST00000566126 VWC2Q2TAL6 325 aa10.51□□□□□ -0.73
CLK3-217ENST00000566126 C14orf177Q52M58 125 aa10.51□□□□□ -0.73
CLK3-217ENST00000566126 SPANXN5Q5MJ07 72 aa10.51□□□□□ -0.73
CLK3-217ENST00000566126 C9orf163Q8N9P6 203 aa10.51□□□□□ -0.73
CLK3-217ENST00000566126 TMEM229BQ8NBD8 167 aa10.51□□□□□ -0.73
CLK3-217ENST00000566126 MRPL53Q96EL3 112 aaKnown RBP10.51□□□□□ -0.73
CLK3-217ENST00000566126 SRRQ9GZT4 340 aa10.51□□□□□ -0.73
CLK3-217ENST00000566126 COMMD3Q9UBI1 195 aa10.51□□□□□ -0.73
CLK3-217ENST00000566126 H3BP45 60 aa10.5□□□□□ -0.73
CLK3-217ENST00000566126 WRBO00258 174 aa10.5□□□□□ -0.73
CLK3-217ENST00000566126 CIRBPQ14011 172 aaKnown RBP10.5□□□□□ -0.73
CLK3-217ENST00000566126 SDIM1Q6ZPB5 146 aa10.5□□□□□ -0.73
CLK3-217ENST00000566126 OR51S1Q8NGJ8 323 aa10.5□□□□□ -0.73
CLK3-217ENST00000566126 CIB3Q96Q77 187 aaPredicted RBP10.5□□□□□ -0.73
CLK3-217ENST00000566126 CRCT1Q9UGL9 99 aa10.5□□□□□ -0.73
CLK3-217ENST00000566126 KCNIP3Q9Y2W7 256 aa10.5□□□□□ -0.73
CLK3-217ENST00000566126 K7EPK0 472 aa10.49□□□□□ -0.73
CLK3-217ENST00000566126 TMEM183BQ1AE95 376 aa10.49□□□□□ -0.73
CLK3-217ENST00000566126 TMEM183AQ8IXX5 376 aa10.49□□□□□ -0.73
CLK3-217ENST00000566126 KIF25-AS1Q9Y6Z4 181 aa10.49□□□□□ -0.73
CLK3-217ENST00000566126 PHOX2AO14813 284 aa10.48□□□□□ -0.73
CLK3-217ENST00000566126 SYNGR2O43760 224 aa10.48□□□□□ -0.73
CLK3-217ENST00000566126 MED6O75586 246 aa10.48□□□□□ -0.73
CLK3-217ENST00000566126 TAS2R19P59542 299 aa10.48□□□□□ -0.73
CLK3-217ENST00000566126 SLC38A11Q08AI6 406 aa10.48□□□□□ -0.73
CLK3-217ENST00000566126 RHOHQ15669 191 aa10.48□□□□□ -0.73
CLK3-217ENST00000566126 GUK1Q16774 197 aa10.48□□□□□ -0.73
CLK3-217ENST00000566126 PXDC1Q5TGL8 231 aa10.48□□□□□ -0.73
CLK3-217ENST00000566126 ATRAIDQ6UW56 229 aa10.48□□□□□ -0.73
CLK3-217ENST00000566126 PRADC1Q9BSG0 188 aa10.48□□□□□ -0.73
CLK3-217ENST00000566126 ZNF253O75346 499 aa10.47□□□□□ -0.73
CLK3-217ENST00000566126 UBE2MP61081 183 aaKnown RBP10.47□□□□□ -0.73
CLK3-217ENST00000566126 ZC2HC1AQ96GY0 325 aa10.47□□□□□ -0.73
CLK3-217ENST00000566126 ZNF492Q9P255 531 aa10.47□□□□□ -0.73
CLK3-217ENST00000566126 KLK12Q9UKR0 248 aa10.47□□□□□ -0.73
CLK3-217ENST00000566126 STRAPQ9Y3F4 350 aaKnown RBP10.47□□□□□ -0.73
CLK3-217ENST00000566126 IGKV2-40A0A087WW87 121 aaPredicted RBP10.46□□□□□ -0.73
CLK3-217ENST00000566126 TRBV6-4A0A1B0GX49 114 aa10.46□□□□□ -0.73
CLK3-217ENST00000566126 FBLL1A6NHQ2 334 aaKnown RBP10.46□□□□□ -0.73
CLK3-217ENST00000566126 M0R2P5 195 aa10.46□□□□□ -0.73
CLK3-217ENST00000566126 HPGDSO60760 199 aa10.46□□□□□ -0.73
CLK3-217ENST00000566126 IGKV2D-40P01614 121 aaPredicted RBP10.46□□□□□ -0.73
CLK3-217ENST00000566126 PRSS1P07477 247 aa10.46□□□□□ -0.73
CLK3-217ENST00000566126 OR10J4P0C629 311 aa10.46□□□□□ -0.73
CLK3-217ENST00000566126 DGAT2L7PQ6IED9 249 aa10.46□□□□□ -0.73
CLK3-217ENST00000566126 YIPF6Q96EC8 236 aa10.46□□□□□ -0.73
CLK3-217ENST00000566126 ANKRD65E5RJM6 399 aa10.45□□□□□ -0.74
CLK3-217ENST00000566126 COX7A2P2O60397 106 aa10.45□□□□□ -0.74
CLK3-217ENST00000566126 NDUFB4O95168 129 aa10.45□□□□□ -0.74
CLK3-217ENST00000566126 BAK1Q16611 211 aa10.45□□□□□ -0.74
CLK3-217ENST00000566126 TMEM78Q5T7P6 136 aa10.45□□□□□ -0.74
CLK3-217ENST00000566126 DPPA3Q6W0C5 159 aa10.45□□□□□ -0.74
CLK3-217ENST00000566126 UBE2WQ96B02 151 aa10.45□□□□□ -0.74
CLK3-217ENST00000566126 C2orf50Q96LR7 162 aa10.45□□□□□ -0.74
CLK3-217ENST00000566126 TRGV11A0A075B6L2 103 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms