RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 RBM3P98179 157 aaKnown RBP2.32□□□□□ -2.04
CHD9-216ENST00000565803 FHL2Q14192 279 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 TIFABQ6ZNK6 161 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 NFE4Q86UQ8 179 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 LINC00311Q8N616 119 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 MRPS24Q96EL2 167 aaKnown RBP2.32□□□□□ -2.04
CHD9-216ENST00000565803 PARLQ9H300 379 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 TUBA4BQ9H853 241 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 NPVFQ9HCQ7 196 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 GOLGA4Q13439 2230 aaKnown RBP2.32□□□□□ -2.04
CHD9-216ENST00000565803 IGHV3-38A0A0C4DH36 116 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.32□□□□□ -2.04
CHD9-216ENST00000565803 K7ERS5 55 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 SLC25A14O95258 325 aaPredicted RBP2.32□□□□□ -2.04
CHD9-216ENST00000565803 SPTBP11277 2137 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 CRISP2P16562 243 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 ICAM4Q14773 271 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 HMGN3Q15651 99 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 Q5XG85 94 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 LHFPL1Q86WI0 220 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 RPP25LQ8N5L8 163 aaKnown RBP2.32□□□□□ -2.04
CHD9-216ENST00000565803 OR10AC1Q8NH08 325 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 IGFBPL1Q8WX77 278 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 C18orf12Q96KH6 178 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 PYGO2Q9BRQ0 406 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 PLA2G12AQ9BZM1 189 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 GNB4Q9HAV0 340 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 ZNF286AQ9HBT8 521 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 LSM2Q9Y333 95 aaKnown RBP2.32□□□□□ -2.04
CHD9-216ENST00000565803 ZFHX3Q15911 3703 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 ICE1Q9Y2F5 2266 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 PI4KAP42356 2102 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 SETD2Q9BYW2 2564 aaPredicted RBP2.32□□□□□ -2.04
CHD9-216ENST00000565803 COLCA2A8K830 154 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 UBL3O95164 117 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 NMBP08949 121 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 SLC25A6P12236 298 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 HLA-DRB4P13762 266 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 SSR2P43308 183 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 HERVK_113P61574 105 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 UBE2L3P68036 154 aaKnown RBP2.32□□□□□ -2.04
CHD9-216ENST00000565803 CEMP1Q6PRD7 247 aaPredicted RBP2.32□□□□□ -2.04
CHD9-216ENST00000565803 ZNF329Q86UD4 541 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 GGNQ86UU5 652 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 PRR15Q8IV56 129 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 C10orf82Q8WW14 230 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 TMEM158Q8WZ71 300 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 CHCHD5Q9BSY4 110 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 GABARAPL1Q9H0R8 117 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 HLA-DRB4X5D2U9 266 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 ATMQ13315 3056 aa2.32□□□□□ -2.04
CHD9-216ENST00000565803 TRBV27A0A0K0K1C4 114 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 H3BT86 120 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 K7EP34 96 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 OR1I1O60431 355 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 PEBP1P30086 187 aaKnown RBP2.31□□□□□ -2.04
CHD9-216ENST00000565803 YPEL3P61236 119 aaPredicted RBP2.31□□□□□ -2.04
CHD9-216ENST00000565803 MIC13Q5XKP0 118 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 Q6YL49 198 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 OR2T35Q8NGX2 323 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 RMI2Q96E14 147 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 SLC35B3Q9H1N7 401 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 DHRS4-AS1Q9P1J3 65 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 SDK2Q58EX2 2172 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 HIVEP1P15822 2718 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 ITPR2Q14571 2701 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 NAV3Q8IVL0 2385 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 IGHV7-81A0A0B4J1V7 117 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 KRTAP16-1A8MUX0 517 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 SMIM1B2RUZ4 78 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 INS-IGF2F8WCM5 200 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 TIMM17BO60830 172 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 UBE2AP49459 152 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 POLR2JP52435 117 aaKnown RBP2.31□□□□□ -2.04
CHD9-216ENST00000565803 CRISP3P54108 245 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 PRR3P79522 188 aaKnown RBP2.31□□□□□ -2.04
CHD9-216ENST00000565803 TDRG1Q3Y452 100 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 C11orf71Q6IPW1 123 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 C11orf87Q6NUJ2 197 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 KRTAP1-3Q8IUG1 177 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 TMEM183AQ8IXX5 376 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 ZNF501Q96CX3 271 aaPredicted RBP2.31□□□□□ -2.04
CHD9-216ENST00000565803 VSIG2Q96IQ7 327 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 MCEEQ96PE7 176 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 YPEL2Q96QA6 119 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 Q9H3A6 140 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 KLK5Q9Y337 293 aaPredicted RBP2.31□□□□□ -2.04
CHD9-216ENST00000565803 MGAQ8IWI9 3026 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 SPTBN1Q01082 2364 aaKnown RBP2.31□□□□□ -2.04
CHD9-216ENST00000565803 IGKV1D-43A0A0B4J1Z2 117 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 NAP1L6A6NFF2 107 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 CREBL2O60519 120 aaPredicted RBP2.31□□□□□ -2.04
CHD9-216ENST00000565803 NCR2O95944 276 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 BGLAPP02818 100 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 ZNF80P51504 273 aaPredicted RBP2.31□□□□□ -2.04
CHD9-216ENST00000565803 LGALS9BQ3B8N2 356 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 ETDBQ3ZM63 59 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 SPATA45Q537H7 98 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 LINC00242Q5T6M2 205 aa2.31□□□□□ -2.04
CHD9-216ENST00000565803 AGPAT4-IT1Q9H0P7 198 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms