RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 LINC01560Q8TB33 94 aa12.81□□□□□ -0.36
LINC00554-201ENST00000564841 GRNP28799 593 aaKnown RBP12.8□□□□□ -0.36
LINC00554-201ENST00000564841 GAFA1Q96PS6 74 aa12.8□□□□□ -0.36
LINC00554-201ENST00000564841 SRSF8Q9BRL6 282 aaKnown RBP12.8□□□□□ -0.36
LINC00554-201ENST00000564841 TMEM160Q9NX00 188 aa12.8□□□□□ -0.36
LINC00554-201ENST00000564841 PSG8Q9UQ74 426 aa12.8□□□□□ -0.36
LINC00554-201ENST00000564841 ODF1Q14990 250 aa12.8□□□□□ -0.36
LINC00554-201ENST00000564841 C12orf74Q32Q52 190 aa12.8□□□□□ -0.36
LINC00554-201ENST00000564841 CCL17Q92583 94 aa12.8□□□□□ -0.36
LINC00554-201ENST00000564841 PTH2Q96A98 100 aa12.8□□□□□ -0.36
LINC00554-201ENST00000564841 RNF7Q9UBF6 113 aa12.8□□□□□ -0.36
LINC00554-201ENST00000564841 NPIPB5A8MRT5 1133 aa12.8□□□□□ -0.36
LINC00554-201ENST00000564841 ENSAO43768 121 aaKnown RBP12.8□□□□□ -0.36
LINC00554-201ENST00000564841 LEPP41159 167 aa12.8□□□□□ -0.36
LINC00554-201ENST00000564841 FOXC2Q99958 501 aa12.8□□□□□ -0.36
LINC00554-201ENST00000564841 PRO0461Q9UI25 63 aa12.8□□□□□ -0.36
LINC00554-201ENST00000564841 THBDP07204 575 aa12.79□□□□□ -0.36
LINC00554-201ENST00000564841 SPINK8P0C7L1 97 aa12.79□□□□□ -0.36
LINC00554-201ENST00000564841 RNF183Q96D59 192 aa12.79□□□□□ -0.36
LINC00554-201ENST00000564841 ZNF48Q96MX3 618 aaPredicted RBP12.79□□□□□ -0.36
LINC00554-201ENST00000564841 TRAV40A0A0B4J280 105 aa12.79□□□□□ -0.36
LINC00554-201ENST00000564841 LY6DQ14210 128 aa12.79□□□□□ -0.36
LINC00554-201ENST00000564841 TMEM133Q9H2Q1 129 aa12.79□□□□□ -0.36
LINC00554-201ENST00000564841 CDIP1Q9H305 208 aa12.79□□□□□ -0.36
LINC00554-201ENST00000564841 OTORQ9NRC9 128 aa12.79□□□□□ -0.36
LINC00554-201ENST00000564841 MALRD1Q5VYJ5 2156 aa12.78□□□□□ -0.36
LINC00554-201ENST00000564841 CNTFRP26992 372 aa12.78□□□□□ -0.36
LINC00554-201ENST00000564841 ATP5IP56385 69 aaPredicted RBP12.78□□□□□ -0.36
LINC00554-201ENST00000564841 C8orf46Q8TAG6 207 aa12.78□□□□□ -0.36
LINC00554-201ENST00000564841 CENPEQ02224 2701 aa12.78□□□□□ -0.36
LINC00554-201ENST00000564841 RAI1Q7Z5J4 1906 aaPredicted RBP12.78□□□□□ -0.36
LINC00554-201ENST00000564841 TWIST1Q15672 202 aa12.78□□□□□ -0.36
LINC00554-201ENST00000564841 TCTEX1D4Q5JR98 221 aa12.78□□□□□ -0.36
LINC00554-201ENST00000564841 C8orf86Q6ZUL3 223 aa12.78□□□□□ -0.36
LINC00554-201ENST00000564841 NFE4Q86UQ8 179 aa12.78□□□□□ -0.36
LINC00554-201ENST00000564841 OSR1Q8TAX0 266 aaPredicted RBP12.78□□□□□ -0.36
LINC00554-201ENST00000564841 SLC25A39Q9BZJ4 359 aaPredicted RBP12.78□□□□□ -0.36
LINC00554-201ENST00000564841 HIGD1AQ9Y241 93 aa12.78□□□□□ -0.36
LINC00554-201ENST00000564841 S4R3C0 116 aa12.78□□□□□ -0.36
LINC00554-201ENST00000564841 TMEM8BA6NDV4 472 aa12.78□□□□□ -0.36
LINC00554-201ENST00000564841 APOMO95445 188 aa12.78□□□□□ -0.36
LINC00554-201ENST00000564841 SUB1P53999 127 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC00554-201ENST00000564841 LYPD2Q6UXB3 125 aa12.78□□□□□ -0.36
LINC00554-201ENST00000564841 TMEM75Q8N9X5 138 aa12.78□□□□□ -0.36
LINC00554-201ENST00000564841 LHBP01229 141 aa12.77□□□□□ -0.36
LINC00554-201ENST00000564841 TM2D2Q9BX73 214 aa12.77□□□□□ -0.36
LINC00554-201ENST00000564841 FCN3O75636 299 aa12.77□□□□□ -0.37
LINC00554-201ENST00000564841 ARHGAP32A7KAX9 2087 aa12.77□□□□□ -0.37
LINC00554-201ENST00000564841 CCL21O00585 134 aa12.76□□□□□ -0.37
LINC00554-201ENST00000564841 IGLV2-23P01705 113 aa12.76□□□□□ -0.37
LINC00554-201ENST00000564841 RBP4P02753 201 aa12.76□□□□□ -0.37
LINC00554-201ENST00000564841 XGP55808 180 aa12.76□□□□□ -0.37
LINC00554-201ENST00000564841 MZT1Q08AG7 82 aa12.76□□□□□ -0.37
LINC00554-201ENST00000564841 ADIPOQQ15848 244 aa12.76□□□□□ -0.37
LINC00554-201ENST00000564841 ZNF493Q6ZR52 646 aa12.76□□□□□ -0.37
LINC00554-201ENST00000564841 TMEM167AQ8TBQ9 72 aa12.76□□□□□ -0.37
LINC00554-201ENST00000564841 MRPL16Q9NX20 251 aaKnown RBP12.76□□□□□ -0.37
LINC00554-201ENST00000564841 U3KQK5 164 aa12.76□□□□□ -0.37
LINC00554-201ENST00000564841 IGKCP01834 107 aa12.76□□□□□ -0.37
LINC00554-201ENST00000564841 SMCPP49901 116 aaPredicted RBP12.76□□□□□ -0.37
LINC00554-201ENST00000564841 ANXA2RQ3ZCQ2 193 aa12.76□□□□□ -0.37
LINC00554-201ENST00000564841 LINC00312Q9Y6C7 94 aa12.76□□□□□ -0.37
LINC00554-201ENST00000564841 ZNF833PQ6ZTB9 187 aa12.75□□□□□ -0.37
LINC00554-201ENST00000564841 HIST1H4GQ99525 98 aa12.75□□□□□ -0.37
LINC00554-201ENST00000564841 DYNLRB1Q9NP97 96 aa12.75□□□□□ -0.37
LINC00554-201ENST00000564841 LYNX1G3V0Z9 82 aa12.75□□□□□ -0.37
LINC00554-201ENST00000564841 LYNX1P0DP58 116 aa12.75□□□□□ -0.37
LINC00554-201ENST00000564841 MRGPRG-AS1Q2M3A8 158 aa12.75□□□□□ -0.37
LINC00554-201ENST00000564841 HIGD1BQ9P298 99 aa12.75□□□□□ -0.37
LINC00554-201ENST00000564841 IGLV3-9A0A075B6K5 115 aa12.75□□□□□ -0.37
LINC00554-201ENST00000564841 IGFL4Q6B9Z1 124 aa12.75□□□□□ -0.37
LINC00554-201ENST00000564841 GATD1Q8NB37 220 aa12.75□□□□□ -0.37
LINC00554-201ENST00000564841 OR10X1Q8NGY0 326 aa12.75□□□□□ -0.37
LINC00554-201ENST00000564841 TRGV9Q99603 122 aa12.75□□□□□ -0.37
LINC00554-201ENST00000564841 MRPL35Q9NZE8 188 aaKnown RBP12.75□□□□□ -0.37
LINC00554-201ENST00000564841 MYO18BQ8IUG5 2567 aa12.74□□□□□ -0.37
LINC00554-201ENST00000564841 HOXB4P17483 251 aaPredicted RBP12.74□□□□□ -0.37
LINC00554-201ENST00000564841 CDSNQ15517 529 aa12.74□□□□□ -0.37
LINC00554-201ENST00000564841 Q8TAT8 98 aa12.74□□□□□ -0.37
LINC00554-201ENST00000564841 CTSZQ9UBR2 303 aa12.74□□□□□ -0.37
LINC00554-201ENST00000564841 SH2D1AO60880 128 aa12.74□□□□□ -0.37
LINC00554-201ENST00000564841 CRYGCP07315 174 aa12.74□□□□□ -0.37
LINC00554-201ENST00000564841 FOXI1Q12951 378 aa12.74□□□□□ -0.37
LINC00554-201ENST00000564841 OR4C13Q8NGP0 309 aa12.74□□□□□ -0.37
LINC00554-201ENST00000564841 ZNF418Q8TF45 676 aaPredicted RBP12.74□□□□□ -0.37
LINC00554-201ENST00000564841 TMEM158Q8WZ71 300 aa12.73□□□□□ -0.37
LINC00554-201ENST00000564841 HRNRQ86YZ3 2850 aaPredicted RBP12.73□□□□□ -0.37
LINC00554-201ENST00000564841 NDUFA3O95167 84 aa12.73□□□□□ -0.37
LINC00554-201ENST00000564841 SIGLEC15Q6ZMC9 328 aa12.73□□□□□ -0.37
LINC00554-201ENST00000564841 TRBV19A0A075B6N1 114 aa12.72□□□□□ -0.37
LINC00554-201ENST00000564841 IGKV2-40A0A087WW87 121 aaPredicted RBP12.72□□□□□ -0.37
LINC00554-201ENST00000564841 TGFAP01135 160 aa12.72□□□□□ -0.37
LINC00554-201ENST00000564841 IGKV2D-40P01614 121 aaPredicted RBP12.72□□□□□ -0.37
LINC00554-201ENST00000564841 RRN3P1Q2M238 152 aa12.72□□□□□ -0.37
LINC00554-201ENST00000564841 TMEM200BQ69YZ2 307 aa12.72□□□□□ -0.37
LINC00554-201ENST00000564841 CFAP46Q8IYW2 2715 aa12.72□□□□□ -0.37
LINC00554-201ENST00000564841 CT45A10P0DMU9 189 aa12.72□□□□□ -0.37
LINC00554-201ENST00000564841 EGR2P11161 476 aaPredicted RBP12.72□□□□□ -0.37
LINC00554-201ENST00000564841 KLF17Q5JT82 389 aaPredicted RBP12.72□□□□□ -0.37
LINC00554-201ENST00000564841 ZMAT4Q9H898 229 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms