RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 FFAR4Q5NUL3 377 aa13.01□□□□□ -0.33
CLN6-204ENST00000564752 ZNF493Q6ZR52 646 aa13.01□□□□□ -0.33
CLN6-204ENST00000564752 PAXXQ9BUH6 204 aa13.01□□□□□ -0.33
CLN6-204ENST00000564752 ABCA13Q86UQ4 5058 aa13□□□□□ -0.33
CLN6-204ENST00000564752 OR7C2O60412 319 aa13□□□□□ -0.33
CLN6-204ENST00000564752 OR10J4P0C629 311 aa13□□□□□ -0.33
CLN6-204ENST00000564752 NBEAP1P0C6P0 100 aa13□□□□□ -0.33
CLN6-204ENST00000564752 FAM3BP58499 235 aaPredicted RBP13□□□□□ -0.33
CLN6-204ENST00000564752 ICAM4Q14773 271 aa13□□□□□ -0.33
CLN6-204ENST00000564752 SOHLH1Q5JUK2 328 aa13□□□□□ -0.33
CLN6-204ENST00000564752 RNASE8Q8TDE3 154 aaKnown RBP13□□□□□ -0.33
CLN6-204ENST00000564752 TIMM8BQ9Y5J9 83 aaPredicted RBP13□□□□□ -0.33
CLN6-204ENST00000564752 TRAV12-3A0A0B4J271 114 aa12.99□□□□□ -0.33
CLN6-204ENST00000564752 ERCC8Q13216 396 aa12.99□□□□□ -0.33
CLN6-204ENST00000564752 FCN2Q15485 313 aa12.99□□□□□ -0.33
CLN6-204ENST00000564752 C1orf134Q5TEV5 83 aa12.99□□□□□ -0.33
CLN6-204ENST00000564752 FAM122CQ6P4D5 195 aa12.99□□□□□ -0.33
CLN6-204ENST00000564752 CCDC28AQ8IWP9 274 aa12.99□□□□□ -0.33
CLN6-204ENST00000564752 RNF141Q8WVD5 230 aa12.99□□□□□ -0.33
CLN6-204ENST00000564752 FXYD5Q96DB9 178 aa12.99□□□□□ -0.33
CLN6-204ENST00000564752 SLC25A5P05141 298 aaKnown RBP12.98□□□□□ -0.33
CLN6-204ENST00000564752 UBE2L3P68036 154 aaKnown RBP12.98□□□□□ -0.33
CLN6-204ENST00000564752 PHYHIPLQ96FC7 376 aa12.98□□□□□ -0.33
CLN6-204ENST00000564752 MED28Q9H204 178 aa12.98□□□□□ -0.33
CLN6-204ENST00000564752 NOP10Q9NPE3 64 aaKnown RBP12.98□□□□□ -0.33
CLN6-204ENST00000564752 IGKV2-40A0A087WW87 121 aaPredicted RBP12.97□□□□□ -0.33
CLN6-204ENST00000564752 F5H768 121 aa12.97□□□□□ -0.33
CLN6-204ENST00000564752 IGKV2D-40P01614 121 aaPredicted RBP12.97□□□□□ -0.33
CLN6-204ENST00000564752 ATP5G1P05496 136 aa12.97□□□□□ -0.33
CLN6-204ENST00000564752 ATP5G3P48201 142 aa12.97□□□□□ -0.33
CLN6-204ENST00000564752 TAS2R45P59539 299 aa12.97□□□□□ -0.33
CLN6-204ENST00000564752 KHDC3LQ587J8 217 aa12.97□□□□□ -0.33
CLN6-204ENST00000564752 LINC00477Q96M19 166 aa12.97□□□□□ -0.33
CLN6-204ENST00000564752 PYGO2Q9BRQ0 406 aa12.97□□□□□ -0.33
CLN6-204ENST00000564752 AGPAT4-IT1Q9H0P7 198 aa12.97□□□□□ -0.33
CLN6-204ENST00000564752 C7orf71A4D174 169 aa12.96□□□□□ -0.33
CLN6-204ENST00000564752 CBY3A6NI87 242 aa12.96□□□□□ -0.33
CLN6-204ENST00000564752 TMEM78Q5T7P6 136 aa12.96□□□□□ -0.33
CLN6-204ENST00000564752 C9orf47Q6ZRZ4 202 aa12.96□□□□□ -0.33
CLN6-204ENST00000564752 ATG101Q9BSB4 218 aa12.96□□□□□ -0.33
CLN6-204ENST00000564752 WFDC1Q9HC57 220 aa12.96□□□□□ -0.33
CLN6-204ENST00000564752 NACAE9PAV3 2078 aa12.95□□□□□ -0.34
CLN6-204ENST00000564752 SNURFLB1AK76 121 aa12.95□□□□□ -0.34
CLN6-204ENST00000564752 KLLNB2CW77 178 aa12.95□□□□□ -0.34
CLN6-204ENST00000564752 ZNF503Q96F45 646 aa12.95□□□□□ -0.34
CLN6-204ENST00000564752 FAM19A4Q96LR4 140 aa12.95□□□□□ -0.34
CLN6-204ENST00000564752 NUDT3O95989 172 aa12.94□□□□□ -0.34
CLN6-204ENST00000564752 CSN1S1P47710 185 aa12.94□□□□□ -0.34
CLN6-204ENST00000564752 BTN1A1Q13410 526 aa12.94□□□□□ -0.34
CLN6-204ENST00000564752 ACOT6Q3I5F7 207 aaPredicted RBP12.94□□□□□ -0.34
CLN6-204ENST00000564752 ZNRF2Q8NHG8 242 aa12.94□□□□□ -0.34
CLN6-204ENST00000564752 VGLL1Q99990 258 aa12.94□□□□□ -0.34
CLN6-204ENST00000564752 LRP1BQ9NZR2 4599 aa12.93□□□□□ -0.34
CLN6-204ENST00000564752 GPX1P07203 203 aa12.93□□□□□ -0.34
CLN6-204ENST00000564752 CRISP2P16562 243 aa12.93□□□□□ -0.34
CLN6-204ENST00000564752 M6PRP20645 277 aa12.93□□□□□ -0.34
CLN6-204ENST00000564752 RANP62826 216 aaKnown RBP12.93□□□□□ -0.34
CLN6-204ENST00000564752 ZNF266Q14584 549 aa12.93□□□□□ -0.34
CLN6-204ENST00000564752 LYPD1Q8N2G4 141 aa12.93□□□□□ -0.34
CLN6-204ENST00000564752 Q9H3A6 140 aa12.93□□□□□ -0.34
CLN6-204ENST00000564752 A0A1W2PPV4 95 aa12.92□□□□□ -0.34
CLN6-204ENST00000564752 NMBP08949 121 aa12.92□□□□□ -0.34
CLN6-204ENST00000564752 RNASE4P34096 147 aaKnown RBP12.92□□□□□ -0.34
CLN6-204ENST00000564752 CD300CQ08708 224 aa12.92□□□□□ -0.34
CLN6-204ENST00000564752 ZNF575Q86XF7 245 aa12.92□□□□□ -0.34
CLN6-204ENST00000564752 ZNF680Q8NEM1 530 aa12.92□□□□□ -0.34
CLN6-204ENST00000564752 AQP10Q96PS8 301 aa12.92□□□□□ -0.34
CLN6-204ENST00000564752 ZNF492Q9P255 531 aa12.92□□□□□ -0.34
CLN6-204ENST00000564752 HSPG2P98160 4391 aa12.92□□□□□ -0.34
CLN6-204ENST00000564752 NBDYA0A0U1RRE5 68 aa12.91□□□□□ -0.34
CLN6-204ENST00000564752 EIF3GO75821 320 aaKnown RBP eCLIP12.91□□□□□ -0.34
CLN6-204ENST00000564752 GIPP09681 153 aaPredicted RBP12.91□□□□□ -0.34
CLN6-204ENST00000564752 ZNF138P52744 262 aa12.91□□□□□ -0.34
CLN6-204ENST00000564752 CCL18P55774 89 aa12.91□□□□□ -0.34
CLN6-204ENST00000564752 RAB2AP61019 212 aa12.91□□□□□ -0.34
CLN6-204ENST00000564752 ZFAND2AQ8N6M9 145 aa12.91□□□□□ -0.34
CLN6-204ENST00000564752 LINC00612Q8N6U2 182 aa12.91□□□□□ -0.34
CLN6-204ENST00000564752 Q8TAT8 98 aa12.91□□□□□ -0.34
CLN6-204ENST00000564752 ASB13Q8WXK3 278 aa12.91□□□□□ -0.34
CLN6-204ENST00000564752 GAGE12BA1L429 117 aa12.9□□□□□ -0.34
CLN6-204ENST00000564752 GAGE7O76087 117 aa12.9□□□□□ -0.34
CLN6-204ENST00000564752 GAGE12FP0CL80 117 aa12.9□□□□□ -0.34
CLN6-204ENST00000564752 GAGE12GP0CL81 117 aa12.9□□□□□ -0.34
CLN6-204ENST00000564752 GAGE12IP0CL82 117 aa12.9□□□□□ -0.34
CLN6-204ENST00000564752 PQLC2Q6ZP29 291 aa12.9□□□□□ -0.34
CLN6-204ENST00000564752 EIF4E3Q8N5X7 224 aaKnown RBP12.9□□□□□ -0.34
CLN6-204ENST00000564752 HSD17B11Q8NBQ5 300 aa12.9□□□□□ -0.34
CLN6-204ENST00000564752 LINC00467Q9BRT7 94 aa12.9□□□□□ -0.34
CLN6-204ENST00000564752 LINC00588Q9Y4M8 146 aa12.9□□□□□ -0.34
CLN6-204ENST00000564752 RBAKDNA6NC62 111 aa12.89□□□□□ -0.35
CLN6-204ENST00000564752 RGS13O14921 159 aa12.89□□□□□ -0.35
CLN6-204ENST00000564752 ZNF324O75467 553 aaPredicted RBP12.89□□□□□ -0.35
CLN6-204ENST00000564752 TNP2Q05952 138 aa12.89□□□□□ -0.35
CLN6-204ENST00000564752 DAZ2Q13117 558 aaKnown RBP12.89□□□□□ -0.35
CLN6-204ENST00000564752 PRR9Q5T870 116 aa12.89□□□□□ -0.35
CLN6-204ENST00000564752 OR10G4Q8NGN3 311 aa12.89□□□□□ -0.35
CLN6-204ENST00000564752 OR10G9Q8NGN4 311 aa12.89□□□□□ -0.35
CLN6-204ENST00000564752 OR10G7Q8NGN6 311 aa12.89□□□□□ -0.35
CLN6-204ENST00000564752 RXFP4Q8TDU9 374 aa12.89□□□□□ -0.35
CLN6-204ENST00000564752 TRBV7-9A0A0J9YWB2 115 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms