RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 FAM106AQ4KMX7 169 aa15.44■□□□□ 0.06
MSLN-205ENST00000563941 ZNF747Q9BV97 191 aa15.44■□□□□ 0.06
MSLN-205ENST00000563941 SIGLEC8Q9NYZ4 499 aa15.44■□□□□ 0.06
MSLN-205ENST00000563941 TP73-AS1Q9UF72 201 aa15.44■□□□□ 0.06
MSLN-205ENST00000563941 HSBP1L1C9JCN9 74 aa15.44■□□□□ 0.06
MSLN-205ENST00000563941 NPSP0C0P6 89 aa15.44■□□□□ 0.06
MSLN-205ENST00000563941 TWIST1Q15672 202 aa15.44■□□□□ 0.06
MSLN-205ENST00000563941 MRPL51Q4U2R6 128 aaKnown RBP15.44■□□□□ 0.06
MSLN-205ENST00000563941 LINC01545Q5VT33 79 aa15.44■□□□□ 0.06
MSLN-205ENST00000563941 GOLT1BQ9Y3E0 138 aa15.44■□□□□ 0.06
MSLN-205ENST00000563941 GNLYP22749 145 aa15.43■□□□□ 0.06
MSLN-205ENST00000563941 SRSF2Q01130 221 aaKnown RBP15.43■□□□□ 0.06
MSLN-205ENST00000563941 ZNF575Q86XF7 245 aa15.43■□□□□ 0.06
MSLN-205ENST00000563941 SLC50A1Q9BRV3 221 aa15.43■□□□□ 0.06
MSLN-205ENST00000563941 IGHV3OR16-13A0A075B7E8 117 aa15.43■□□□□ 0.06
MSLN-205ENST00000563941 TRBV7-1A0A0A6YYK4 115 aa15.43■□□□□ 0.06
MSLN-205ENST00000563941 IGHV3-74A0A0B4J1X5 117 aa15.43■□□□□ 0.06
MSLN-205ENST00000563941 ORM1P02763 201 aa15.43■□□□□ 0.06
MSLN-205ENST00000563941 LOXL1Q08397 574 aaPredicted RBP15.43■□□□□ 0.06
MSLN-205ENST00000563941 PMCHL2Q9BQD1 86 aa15.43■□□□□ 0.06
MSLN-205ENST00000563941 FABP5P3A8MUU1 101 aa15.42■□□□□ 0.06
MSLN-205ENST00000563941 IGHV4-39P01824 125 aa15.42■□□□□ 0.06
MSLN-205ENST00000563941 TMEM219Q86XT9 240 aa15.42■□□□□ 0.06
MSLN-205ENST00000563941 A0A096LNJ9 63 aa15.41■□□□□ 0.06
MSLN-205ENST00000563941 RBAKDNA6NC62 111 aa15.41■□□□□ 0.06
MSLN-205ENST00000563941 IGHV3OR16-10A0A075B7F0 116 aa15.41■□□□□ 0.06
MSLN-205ENST00000563941 PSMG3-AS1Q96PY0 264 aa15.41■□□□□ 0.06
MSLN-205ENST00000563941 METTL26Q96S19 204 aa15.41■□□□□ 0.06
MSLN-205ENST00000563941 SVEP1Q4LDE5 3571 aa15.4■□□□□ 0.06
MSLN-205ENST00000563941 ZNF207O43670 478 aaKnown RBP15.4■□□□□ 0.06
MSLN-205ENST00000563941 IL17RELQ6ZVW7 336 aa15.4■□□□□ 0.06
MSLN-205ENST00000563941 SCRT2Q9NQ03 307 aa15.4■□□□□ 0.06
MSLN-205ENST00000563941 IGHV3-49A0A0A0MS15 119 aa15.4■□□□□ 0.06
MSLN-205ENST00000563941 SMKR1H3BMG3 65 aa15.4■□□□□ 0.06
MSLN-205ENST00000563941 NCR2O95944 276 aa15.4■□□□□ 0.06
MSLN-205ENST00000563941 CKS2P33552 79 aa15.4■□□□□ 0.06
MSLN-205ENST00000563941 SLC25A34Q6PIV7 304 aa15.4■□□□□ 0.06
MSLN-205ENST00000563941 MOB4Q9Y3A3 225 aa15.4■□□□□ 0.06
MSLN-205ENST00000563941 AKAP6Q13023 2319 aa15.39■□□□□ 0.05
MSLN-205ENST00000563941 ATP5G2Q06055 141 aa15.39■□□□□ 0.05
MSLN-205ENST00000563941 MS4A6AQ9H2W1 248 aa15.39■□□□□ 0.05
MSLN-205ENST00000563941 NPYP01303 97 aa15.38■□□□□ 0.05
MSLN-205ENST00000563941 PAX8Q06710 450 aa15.38■□□□□ 0.05
MSLN-205ENST00000563941 LINC01559Q495D7 138 aa15.38■□□□□ 0.05
MSLN-205ENST00000563941 CNFNQ9BYD5 112 aa15.38■□□□□ 0.05
MSLN-205ENST00000563941 MSRB1Q9NZV6 116 aa15.38■□□□□ 0.05
MSLN-205ENST00000563941 CACNA1BQ00975 2339 aa15.38■□□□□ 0.05
MSLN-205ENST00000563941 TRAV8-2A0A0B4J237 113 aa15.38■□□□□ 0.05
MSLN-205ENST00000563941 TRAV41A0A0B4J266 112 aa15.38■□□□□ 0.05
MSLN-205ENST00000563941 OR8A1Q8NGG7 326 aa15.37■□□□□ 0.05
MSLN-205ENST00000563941 IGHV1-69DA0A0B4J2H0 117 aa15.37■□□□□ 0.05
MSLN-205ENST00000563941 IGHV1-69P01742 117 aa15.37■□□□□ 0.05
MSLN-205ENST00000563941 C19orf54Q5BKX5 351 aa15.37■□□□□ 0.05
MSLN-205ENST00000563941 C8orf86Q6ZUL3 223 aa15.37■□□□□ 0.05
MSLN-205ENST00000563941 AGPAT4-IT1Q9H0P7 198 aa15.37■□□□□ 0.05
MSLN-205ENST00000563941 LINC00527Q9UJ94 153 aa15.37■□□□□ 0.05
MSLN-205ENST00000563941 U3KQE9 123 aa15.37■□□□□ 0.05
MSLN-205ENST00000563941 BRD3OSQ6XYD6 125 aa15.36■□□□□ 0.05
MSLN-205ENST00000563941 PIFOQ8TCI5 191 aa15.36■□□□□ 0.05
MSLN-205ENST00000563941 RNF185Q96GF1 192 aa15.36■□□□□ 0.05
MSLN-205ENST00000563941 ABCA2Q9BZC7 2435 aa15.36■□□□□ 0.05
MSLN-205ENST00000563941 TRAV40A0A0B4J280 105 aa15.35■□□□□ 0.05
MSLN-205ENST00000563941 FAM223BA6NKX1 122 aa15.35■□□□□ 0.05
MSLN-205ENST00000563941 HBDP02042 147 aa15.35■□□□□ 0.05
MSLN-205ENST00000563941 FXYD7P58549 80 aa15.35■□□□□ 0.05
MSLN-205ENST00000563941 FAM223AQ8IWN6 122 aa15.35■□□□□ 0.05
MSLN-205ENST00000563941 ORAOV1Q8WV07 137 aa15.35■□□□□ 0.05
MSLN-205ENST00000563941 MRPL53Q96EL3 112 aaKnown RBP15.35■□□□□ 0.05
MSLN-205ENST00000563941 CFAP46Q8IYW2 2715 aa15.34■□□□□ 0.05
MSLN-205ENST00000563941 PPIFP30405 207 aaKnown RBP15.34■□□□□ 0.05
MSLN-205ENST00000563941 MPV17L2Q567V2 206 aa15.34■□□□□ 0.05
MSLN-205ENST00000563941 TMEM78Q5T7P6 136 aa15.34■□□□□ 0.05
MSLN-205ENST00000563941 PRSS57Q6UWY2 283 aa15.34■□□□□ 0.05
MSLN-205ENST00000563941 Q6ZVH6 145 aa15.34■□□□□ 0.05
MSLN-205ENST00000563941 IGHV4-61A0A0C4DH41 118 aa15.34■□□□□ 0.05
MSLN-205ENST00000563941 TRGV3P03979 118 aa15.34■□□□□ 0.05
MSLN-205ENST00000563941 CRIP2P52943 208 aaPredicted RBP15.34■□□□□ 0.05
MSLN-205ENST00000563941 HIST1H1AQ02539 215 aaPredicted RBP15.34■□□□□ 0.05
MSLN-205ENST00000563941 ATP6V0BQ99437 205 aa15.34■□□□□ 0.05
MSLN-205ENST00000563941 PIMREGQ9BSJ6 248 aa15.34■□□□□ 0.05
MSLN-205ENST00000563941 IGKV3D-20A0A0C4DH25 116 aa15.33■□□□□ 0.04
MSLN-205ENST00000563941 C11orf21Q9P2W6 132 aa15.33■□□□□ 0.04
MSLN-205ENST00000563941 COX11Q9Y6N1 276 aa15.33■□□□□ 0.04
MSLN-205ENST00000563941 TCF21O43680 179 aa15.32■□□□□ 0.04
MSLN-205ENST00000563941 PPBPP02775 128 aa15.32■□□□□ 0.04
MSLN-205ENST00000563941 HIF1ANQ9NWT6 349 aa15.32■□□□□ 0.04
MSLN-205ENST00000563941 NUDT3O95989 172 aa15.31■□□□□ 0.04
MSLN-205ENST00000563941 ARL3P36405 182 aa15.31■□□□□ 0.04
MSLN-205ENST00000563941 LGALS9BQ3B8N2 356 aa15.31■□□□□ 0.04
MSLN-205ENST00000563941 LGALS9CQ6DKI2 356 aa15.31■□□□□ 0.04
MSLN-205ENST00000563941 C9orf47Q6ZRZ4 202 aa15.31■□□□□ 0.04
MSLN-205ENST00000563941 MAP1LC3AQ9H492 121 aa15.31■□□□□ 0.04
MSLN-205ENST00000563941 GAS8-AS1O95177 125 aa15.31■□□□□ 0.04
MSLN-205ENST00000563941 COX8AP10176 69 aa15.31■□□□□ 0.04
MSLN-205ENST00000563941 ZNF738Q8NE65 137 aa15.31■□□□□ 0.04
MSLN-205ENST00000563941 MEGF9Q9H1U4 602 aa15.31■□□□□ 0.04
MSLN-205ENST00000563941 CACNG7P62955 275 aa15.3■□□□□ 0.04
MSLN-205ENST00000563941 GLMPQ8WWB7 406 aa15.3■□□□□ 0.04
MSLN-205ENST00000563941 C16orf92Q96LL3 132 aa15.3■□□□□ 0.04
MSLN-205ENST00000563941 CCL19Q99731 98 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms