RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 FGFBP3Q8TAT2 258 aa7.28□□□□□ -1.24
CDH1-205ENST00000562836 RNASE6Q93091 150 aaKnown RBP7.28□□□□□ -1.24
CDH1-205ENST00000562836 EML6Q6ZMW3 1958 aa7.28□□□□□ -1.24
CDH1-205ENST00000562836 A0A1W2PQD3 144 aa7.27□□□□□ -1.25
CDH1-205ENST00000562836 HMGA1P17096 107 aaKnown RBP7.27□□□□□ -1.25
CDH1-205ENST00000562836 HIST1H4AP62805 103 aaKnown RBP7.27□□□□□ -1.25
CDH1-205ENST00000562836 HBBP68871 147 aa7.27□□□□□ -1.25
CDH1-205ENST00000562836 MSMPQ1L6U9 139 aa7.27□□□□□ -1.25
CDH1-205ENST00000562836 ZNF542PQ5EBM4 170 aa7.27□□□□□ -1.25
CDH1-205ENST00000562836 SMCR5Q8TEV8 140 aa7.27□□□□□ -1.25
CDH1-205ENST00000562836 Q9H3A6 140 aa7.27□□□□□ -1.25
CDH1-205ENST00000562836 A0A096LNJ9 63 aa7.26□□□□□ -1.25
CDH1-205ENST00000562836 RPL18AQ02543 176 aaKnown RBP7.26□□□□□ -1.25
CDH1-205ENST00000562836 GFRALQ6UXV0 394 aa7.26□□□□□ -1.25
CDH1-205ENST00000562836 LINC00643Q86TS7 51 aa7.26□□□□□ -1.25
CDH1-205ENST00000562836 MPLKIPQ8TAP9 179 aa7.26□□□□□ -1.25
CDH1-205ENST00000562836 FXYD5Q96DB9 178 aa7.26□□□□□ -1.25
CDH1-205ENST00000562836 S1PR3Q99500 378 aa7.26□□□□□ -1.25
CDH1-205ENST00000562836 MKI67P46013 3256 aaKnown RBP7.26□□□□□ -1.25
CDH1-205ENST00000562836 A0A1B0GXF2 115 aa7.26□□□□□ -1.25
CDH1-205ENST00000562836 TMEM202A6NGA9 273 aa7.26□□□□□ -1.25
CDH1-205ENST00000562836 C17orf51A8MQB3 221 aa7.26□□□□□ -1.25
CDH1-205ENST00000562836 HMGN2P05204 90 aaKnown RBP7.26□□□□□ -1.25
CDH1-205ENST00000562836 NCBP2P52298 156 aaKnown RBP eCLIP7.26□□□□□ -1.25
CDH1-205ENST00000562836 TMEM170BQ5T4T1 132 aa7.26□□□□□ -1.25
CDH1-205ENST00000562836 RPRMLQ8N4K4 120 aa7.26□□□□□ -1.25
CDH1-205ENST00000562836 C11orf52Q96A22 123 aa7.26□□□□□ -1.25
CDH1-205ENST00000562836 IFI27L1Q96BM0 104 aa7.26□□□□□ -1.25
CDH1-205ENST00000562836 WDR83OSQ9Y284 106 aa7.26□□□□□ -1.25
CDH1-205ENST00000562836 MYO7BQ6PIF6 2116 aa7.26□□□□□ -1.25
CDH1-205ENST00000562836 PAX8Q06710 450 aa7.25□□□□□ -1.25
CDH1-205ENST00000562836 ZNF714Q96N38 554 aa7.25□□□□□ -1.25
CDH1-205ENST00000562836 A0A0G2JRQ6 117 aa7.25□□□□□ -1.25
CDH1-205ENST00000562836 H0Y8X5 98 aa7.25□□□□□ -1.25
CDH1-205ENST00000562836 CXCL5P42830 114 aa7.25□□□□□ -1.25
CDH1-205ENST00000562836 UBE2D1P51668 147 aa7.25□□□□□ -1.25
CDH1-205ENST00000562836 KISS1Q15726 138 aa7.25□□□□□ -1.25
CDH1-205ENST00000562836 SLC50A1Q9BRV3 221 aa7.25□□□□□ -1.25
CDH1-205ENST00000562836 NPCDR1Q9BY65 106 aa7.25□□□□□ -1.25
CDH1-205ENST00000562836 MYOFQ9NZM1 2061 aa7.25□□□□□ -1.25
CDH1-205ENST00000562836 IQCF6A8MYZ5 107 aa7.25□□□□□ -1.25
CDH1-205ENST00000562836 IFI27P40305 119 aaPredicted RBP7.25□□□□□ -1.25
CDH1-205ENST00000562836 SFTPA2Q8IWL1 248 aa7.25□□□□□ -1.25
CDH1-205ENST00000562836 SFTPA1Q8IWL2 248 aa7.25□□□□□ -1.25
CDH1-205ENST00000562836 METTL26Q96S19 204 aa7.25□□□□□ -1.25
CDH1-205ENST00000562836 LAMA2P24043 3122 aaKnown RBP7.24□□□□□ -1.25
CDH1-205ENST00000562836 IGLV2-8P01709 118 aa7.24□□□□□ -1.25
CDH1-205ENST00000562836 EDDM3BP56851 147 aa7.24□□□□□ -1.25
CDH1-205ENST00000562836 FAM104BQ5XKR9 115 aa7.24□□□□□ -1.25
CDH1-205ENST00000562836 TMEM14AQ9Y6G1 99 aa7.24□□□□□ -1.25
CDH1-205ENST00000562836 EML5Q05BV3 1969 aa7.24□□□□□ -1.25
CDH1-205ENST00000562836 C2orf16Q68DN1 1984 aa7.24□□□□□ -1.25
CDH1-205ENST00000562836 TRBV7-1A0A0A6YYK4 115 aa7.24□□□□□ -1.25
CDH1-205ENST00000562836 VCYO14598 125 aa7.24□□□□□ -1.25
CDH1-205ENST00000562836 GP9P14770 177 aa7.24□□□□□ -1.25
CDH1-205ENST00000562836 PSMG4Q5JS54 123 aa7.24□□□□□ -1.25
CDH1-205ENST00000562836 C2orf82Q6UX34 121 aa7.24□□□□□ -1.25
CDH1-205ENST00000562836 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.24□□□□□ -1.25
CDH1-205ENST00000562836 PLXNA2O75051 1894 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 CPAMD8Q8IZJ3 1885 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 IGHV4-39P01824 125 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 DAD1P61803 113 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 PAPPA-AS1Q5QFB9 102 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 NDUFA11Q86Y39 141 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 NUP37Q8NFH4 326 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 RITA1Q96K30 269 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 TM2D3Q9BRN9 247 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 FGF22Q9HCT0 170 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 LAMA3Q16787 3333 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 A0A0G2JNJ9 132 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 LOC389332A0A1B0GUA5 103 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 OVOL3O00110 214 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 CD70P32970 193 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 SPATA3Q8NHX4 192 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 C1orf147Q96MC9 270 aaPredicted RBP7.23□□□□□ -1.25
CDH1-205ENST00000562836 Q9UFV3 132 aa7.23□□□□□ -1.25
CDH1-205ENST00000562836 LINC01619G3V211 115 aa7.22□□□□□ -1.25
CDH1-205ENST00000562836 TRBV10-2A0A0K0K1G8 114 aa7.22□□□□□ -1.25
CDH1-205ENST00000562836 LOC101059948A0A1B0GTJ6 334 aa7.22□□□□□ -1.25
CDH1-205ENST00000562836 WI2-2373I1.2A0A1W2PRP0 233 aa7.22□□□□□ -1.25
CDH1-205ENST00000562836 RHOHQ15669 191 aa7.22□□□□□ -1.25
CDH1-205ENST00000562836 LYPD5Q6UWN5 251 aa7.22□□□□□ -1.25
CDH1-205ENST00000562836 Q6ZRM9 215 aa7.22□□□□□ -1.25
CDH1-205ENST00000562836 SLC25A2Q9BXI2 301 aa7.22□□□□□ -1.25
CDH1-205ENST00000562836 EGR2P11161 476 aaPredicted RBP7.21□□□□□ -1.25
CDH1-205ENST00000562836 MED12Q93074 2177 aa7.21□□□□□ -1.25
CDH1-205ENST00000562836 CFHR3Q02985 330 aa7.21□□□□□ -1.26
CDH1-205ENST00000562836 TRBV7-6A0A0J9YX20 115 aa7.2□□□□□ -1.26
CDH1-205ENST00000562836 F6UB75 175 aa7.2□□□□□ -1.26
CDH1-205ENST00000562836 TCF15Q12870 199 aa7.2□□□□□ -1.26
CDH1-205ENST00000562836 ECSCRQ19T08 205 aa7.2□□□□□ -1.26
CDH1-205ENST00000562836 ZNF524Q96C55 264 aa7.2□□□□□ -1.26
CDH1-205ENST00000562836 CCKP06307 115 aa7.2□□□□□ -1.26
CDH1-205ENST00000562836 IFI6P09912 130 aa7.2□□□□□ -1.26
CDH1-205ENST00000562836 HEATR5BQ9P2D3 2071 aa7.2□□□□□ -1.26
CDH1-205ENST00000562836 ACYP1P07311 99 aa7.2□□□□□ -1.26
CDH1-205ENST00000562836 FREM3P0C091 2139 aa7.2□□□□□ -1.26
CDH1-205ENST00000562836 ATXN8Q156A1 80 aa7.2□□□□□ -1.26
CDH1-205ENST00000562836 IGFL3Q6UXB1 125 aa7.2□□□□□ -1.26
CDH1-205ENST00000562836 SOSTDC1Q6X4U4 206 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms