RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 SAV1Q9H4B6 383 aaPredicted RBP2.39□□□□□ -2.03
SPG11-225ENST00000561391 THYN1Q9P016 225 aa2.39□□□□□ -2.03
SPG11-225ENST00000561391 DPM3Q9P2X0 92 aa2.39□□□□□ -2.03
SPG11-225ENST00000561391 FUT9Q9Y231 359 aa2.39□□□□□ -2.03
SPG11-225ENST00000561391 PXMP4Q9Y6I8 212 aa2.39□□□□□ -2.03
SPG11-225ENST00000561391 APOBP04114 4563 aaKnown RBP2.39□□□□□ -2.03
SPG11-225ENST00000561391 TRBV24-1A0A075B6N3 115 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 TRAV9-1A0A075B6T8 112 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 IGHV2-26A0A0B4J1V2 119 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 TRAV3A0A0B4J244 114 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 A0A1B0GV50 99 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 A0A1W2PPE3 182 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 A0A1W2PRE2 83 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 MEX3AA1L020 520 aaKnown RBP2.38□□□□□ -2.03
SPG11-225ENST00000561391 A6NDX4 124 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 SRRM4A7MD48 611 aaKnown RBP2.38□□□□□ -2.03
SPG11-225ENST00000561391 C11orf94C9JXX5 98 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 PRSS46E5RG02 174 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 LY6LH3BQJ8 138 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 H7BYZ3 331 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 CNIH1O95406 144 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 MOSP00540 346 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 IGHV3-7P01780 117 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 APOHP02749 345 aaPredicted RBP2.38□□□□□ -2.03
SPG11-225ENST00000561391 TFF1P04155 84 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 IGKV1-16P04430 117 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 S100A8P05109 93 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 SAA1P0DJI8 122 aaPredicted RBP2.38□□□□□ -2.03
SPG11-225ENST00000561391 C8orf88P0DMB2 117 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 RNASE2P10153 161 aaKnown RBP2.38□□□□□ -2.03
SPG11-225ENST00000561391 AREGP15514 252 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 CCL3L1P16619 93 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 BRS3P32247 399 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 RPL27AP46776 148 aaKnown RBP2.38□□□□□ -2.03
SPG11-225ENST00000561391 NPBWR1P48145 328 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 RND2P52198 227 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 CEBPGP53567 150 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 B2MP61769 119 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 GAMTQ14353 236 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 ZNF726P1Q15940 193 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 COX19Q49B96 90 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 TPTE2P1Q5T6R2 138 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 TCF23Q7RTU1 214 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 MOB3BQ86TA1 216 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 PPP1R27Q86WC6 154 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 CBLN2Q8IUK8 224 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 IQCF2Q8IXL9 164 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 VKORC1L1Q8N0U8 176 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 FAM24BQ8N5W8 94 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 NPBQ8NG41 125 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 OR2T10Q8NGZ9 312 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 OR1P1Q8NH06 330 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 SMIM12Q96EX1 92 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 RBM14Q96PK6 669 aaKnown RBP2.38□□□□□ -2.03
SPG11-225ENST00000561391 TRGV9Q99603 122 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 MGST2Q99735 147 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 CHRDL1Q9BU40 450 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 GGTLC1Q9BX51 225 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 ZNF430Q9H8G1 570 aaPredicted RBP2.38□□□□□ -2.03
SPG11-225ENST00000561391 SIGLEC8Q9NYZ4 499 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 CTSZQ9UBR2 303 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 PYGO1Q9Y3Y4 419 aa2.38□□□□□ -2.03
SPG11-225ENST00000561391 TBL2Q9Y4P3 447 aaKnown RBP2.38□□□□□ -2.03
SPG11-225ENST00000561391 IGHV1-3A0A0C4DH29 117 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 PSMB11A5LHX3 300 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 HELTA6NFD8 242 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 FBLL1A6NHQ2 334 aaKnown RBP2.37□□□□□ -2.03
SPG11-225ENST00000561391 C9JCJ5 164 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 PPP5D1E7EU14 171 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 COX7A2P2O60397 106 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 HYPMO75409 117 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 MMP23AO75900 390 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 YIF1AO95070 293 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 IGKV1D-33P01593 117 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 IGKV1-33P01594 117 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 IGLV2-23P01705 113 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 CRYGCP07315 174 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 CRYGBP07316 175 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 OR5G3P0C626 314 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 LINC00869P0C866 280 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 ARL14EPLP0DKL9 152 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 DEFA4P12838 97 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 HIST1H1BP16401 226 aaKnown RBP2.37□□□□□ -2.03
SPG11-225ENST00000561391 GCHFRP30047 84 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 OR10J1P30954 320 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 REG1BP48304 166 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 RAB9AP51151 201 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 UBE2E1P51965 193 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 FGF8P55075 233 aaPredicted RBP2.37□□□□□ -2.03
SPG11-225ENST00000561391 TAS2R60P59551 318 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 PLGLAQ15195 96 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 PSG5Q15238 335 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 ADIRFQ15847 76 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 TIGITQ495A1 244 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 AKIRIN2Q53H80 203 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 SPINK9Q5DT21 86 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 FAM78BQ5VT40 261 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 C10orf113Q5VZT2 155 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 ZNF562Q6V9R5 426 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 SLC16A13Q7RTY0 426 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms