RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 PKHD1L1Q86WI1 4243 aa-1.62□□□□□ -2.67
CASC4-211ENST00000561305 CDK13Q14004 1512 aaKnown RBP-1.62□□□□□ -2.67
CASC4-211ENST00000561305 MYO18BQ8IUG5 2567 aa-1.62□□□□□ -2.67
CASC4-211ENST00000561305 PIK3C2GO75747 1445 aa-1.63□□□□□ -2.67
CASC4-211ENST00000561305 NBDYA0A0U1RRE5 68 aa-1.63□□□□□ -2.67
CASC4-211ENST00000561305 TMEM256-PLSCR3K7ERE1 68 aa-1.63□□□□□ -2.67
CASC4-211ENST00000561305 GGCTO75223 188 aaKnown RBP-1.63□□□□□ -2.67
CASC4-211ENST00000561305 IFNA5P01569 189 aa-1.63□□□□□ -2.67
CASC4-211ENST00000561305 DEFB132Q7Z7B7 95 aa-1.63□□□□□ -2.67
CASC4-211ENST00000561305 C5orf17Q8NAS9 161 aa-1.63□□□□□ -2.67
CASC4-211ENST00000561305 ZHX1-C8orf76Q96EF9 292 aa-1.63□□□□□ -2.67
CASC4-211ENST00000561305 PCNX1Q96RV3 2341 aa-1.63□□□□□ -2.67
CASC4-211ENST00000561305 LAMB1P07942 1786 aa-1.64□□□□□ -2.67
CASC4-211ENST00000561305 A0A087WUJ7 227 aa-1.64□□□□□ -2.67
CASC4-211ENST00000561305 DYNLT3P51808 116 aa-1.64□□□□□ -2.67
CASC4-211ENST00000561305 MAGOHP61326 146 aaKnown RBP-1.64□□□□□ -2.67
CASC4-211ENST00000561305 KLKP1Q107X0 134 aa-1.64□□□□□ -2.67
CASC4-211ENST00000561305 PRO0255Q9UI72 69 aa-1.64□□□□□ -2.67
CASC4-211ENST00000561305 TNS1Q9HBL0 1735 aaKnown RBP-1.64□□□□□ -2.67
CASC4-211ENST00000561305 ABCA1O95477 2261 aa-1.64□□□□□ -2.67
CASC4-211ENST00000561305 BCL9LQ86UU0 1499 aa-1.64□□□□□ -2.67
CASC4-211ENST00000561305 F2Z2F3 143 aa-1.65□□□□□ -2.67
CASC4-211ENST00000561305 SNCBQ16143 134 aa-1.65□□□□□ -2.67
CASC4-211ENST00000561305 BPESC1Q9GZL8 116 aa-1.65□□□□□ -2.67
CASC4-211ENST00000561305 DNAH3Q8TD57 4116 aa-1.65□□□□□ -2.67
CASC4-211ENST00000561305 TACC2O95359 2948 aa-1.66□□□□□ -2.67
CASC4-211ENST00000561305 TRBV19A0A075B6N1 114 aa-1.66□□□□□ -2.68
CASC4-211ENST00000561305 A0A0G2JMM0 328 aa-1.66□□□□□ -2.68
CASC4-211ENST00000561305 A0A1W2PPB8 328 aa-1.66□□□□□ -2.68
CASC4-211ENST00000561305 KIR3DP1A8MWS1 328 aa-1.66□□□□□ -2.68
CASC4-211ENST00000561305 PDE6DO43924 150 aa-1.66□□□□□ -2.68
CASC4-211ENST00000561305 ISOC1Q96CN7 298 aa-1.66□□□□□ -2.68
CASC4-211ENST00000561305 DSCR8Q96T75 97 aa-1.66□□□□□ -2.68
CASC4-211ENST00000561305 CNFNQ9BYD5 112 aa-1.66□□□□□ -2.68
CASC4-211ENST00000561305 CEP164Q9UPV0 1460 aa-1.67□□□□□ -2.68
CASC4-211ENST00000561305 PIAS1O75925 651 aa-1.67□□□□□ -2.68
CASC4-211ENST00000561305 OR4K15Q8NH41 348 aa-1.67□□□□□ -2.68
CASC4-211ENST00000561305 NKIRAS1Q9NYS0 192 aa-1.67□□□□□ -2.68
CASC4-211ENST00000561305 SIPA1L2Q9P2F8 1722 aaPredicted RBP-1.67□□□□□ -2.68
CASC4-211ENST00000561305 ATG2AQ2TAZ0 1938 aa-1.68□□□□□ -2.68
CASC4-211ENST00000561305 GVINP1Q7Z2Y8 2422 aa-1.68□□□□□ -2.68
CASC4-211ENST00000561305 TRPM1Q7Z4N2 1603 aa-1.68□□□□□ -2.68
CASC4-211ENST00000561305 MYL6P60660 151 aa-1.68□□□□□ -2.68
CASC4-211ENST00000561305 ZNF714Q96N38 554 aa-1.68□□□□□ -2.68
CASC4-211ENST00000561305 PARVBQ9HBI1 364 aa-1.68□□□□□ -2.68
CASC4-211ENST00000561305 MRPL35Q9NZE8 188 aaKnown RBP-1.68□□□□□ -2.68
CASC4-211ENST00000561305 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.68□□□□□ -2.68
CASC4-211ENST00000561305 TNRC18O15417 2968 aaPredicted RBP-1.69□□□□□ -2.68
CASC4-211ENST00000561305 LOC101927531A0A1B0GV80 90 aa-1.69□□□□□ -2.68
CASC4-211ENST00000561305 FAM25EA8MYX2 175 aa-1.69□□□□□ -2.68
CASC4-211ENST00000561305 M0R2T5 61 aa-1.69□□□□□ -2.68
CASC4-211ENST00000561305 ATP5G3P48201 142 aa-1.69□□□□□ -2.68
CASC4-211ENST00000561305 HIST1H3AP68431 136 aa-1.69□□□□□ -2.68
CASC4-211ENST00000561305 H3F3AP84243 136 aa-1.69□□□□□ -2.68
CASC4-211ENST00000561305 TRIM4Q9C037 500 aa-1.69□□□□□ -2.68
CASC4-211ENST00000561305 NAT8BQ9UHF3 227 aa-1.69□□□□□ -2.68
CASC4-211ENST00000561305 PI4KAP42356 2102 aa-1.69□□□□□ -2.68
CASC4-211ENST00000561305 DSPPQ9NZW4 1301 aa-1.69□□□□□ -2.68
CASC4-211ENST00000561305 GVQW2A0A096LPI5 108 aaPredicted RBP-1.7□□□□□ -2.68
CASC4-211ENST00000561305 DUXBA0A1W2PPF3 345 aa-1.7□□□□□ -2.68
CASC4-211ENST00000561305 M0R036 132 aa-1.7□□□□□ -2.68
CASC4-211ENST00000561305 GYPBP06028 91 aa-1.7□□□□□ -2.68
CASC4-211ENST00000561305 ERP29P30040 261 aaKnown RBP-1.7□□□□□ -2.68
CASC4-211ENST00000561305 KLRD1Q13241 179 aa-1.7□□□□□ -2.68
CASC4-211ENST00000561305 FAT3Q8TDW7 4589 aa-1.7□□□□□ -2.68
CASC4-211ENST00000561305 ARL5BQ96KC2 179 aa-1.7□□□□□ -2.68
CASC4-211ENST00000561305 CST11Q9H112 138 aa-1.7□□□□□ -2.68
CASC4-211ENST00000561305 BIN3Q9NQY0 253 aa-1.7□□□□□ -2.68
CASC4-211ENST00000561305 ATP6V1DQ9Y5K8 247 aa-1.7□□□□□ -2.68
CASC4-211ENST00000561305 AFDNP55196 1824 aaKnown RBP-1.7□□□□□ -2.68
CASC4-211ENST00000561305 NISCHQ9Y2I1 1504 aa-1.71□□□□□ -2.68
CASC4-211ENST00000561305 A0A0D9SFI3 127 aa-1.71□□□□□ -2.68
CASC4-211ENST00000561305 CST8O60676 142 aa-1.71□□□□□ -2.68
CASC4-211ENST00000561305 AESQ08117 197 aa-1.71□□□□□ -2.68
CASC4-211ENST00000561305 GRPEL2Q8TAA5 225 aa-1.71□□□□□ -2.68
CASC4-211ENST00000561305 CACYBPQ9HB71 228 aaKnown RBP-1.71□□□□□ -2.68
CASC4-211ENST00000561305 PRELID3BQ9Y3B1 194 aa-1.71□□□□□ -2.68
CASC4-211ENST00000561305 BLMP54132 1417 aaPredicted RBP-1.72□□□□□ -2.68
CASC4-211ENST00000561305 ZNF815PA8K554 130 aa-1.72□□□□□ -2.68
CASC4-211ENST00000561305 HIGD1CA8MV81 97 aa-1.72□□□□□ -2.68
CASC4-211ENST00000561305 TCRBP04435 133 aa-1.72□□□□□ -2.68
CASC4-211ENST00000561305 SNRPD3P62318 126 aaKnown RBP-1.72□□□□□ -2.68
CASC4-211ENST00000561305 OTUD6BQ8N6M0 293 aa-1.72□□□□□ -2.68
CASC4-211ENST00000561305 GNPDA2Q8TDQ7 276 aa-1.72□□□□□ -2.68
CASC4-211ENST00000561305 SPRR2FQ96RM1 72 aa-1.72□□□□□ -2.68
CASC4-211ENST00000561305 IQSEC2Q5JU85 1478 aa-1.72□□□□□ -2.68
CASC4-211ENST00000561305 UBR2Q8IWV8 1755 aa-1.72□□□□□ -2.69
CASC4-211ENST00000561305 SSC5DA1L4H1 1573 aa-1.72□□□□□ -2.69
CASC4-211ENST00000561305 FRMPD1Q5SYB0 1578 aa-1.72□□□□□ -2.69
CASC4-211ENST00000561305 ARHGAP31Q2M1Z3 1444 aa-1.73□□□□□ -2.69
CASC4-211ENST00000561305 M0QX08 132 aa-1.73□□□□□ -2.69
CASC4-211ENST00000561305 APODP05090 189 aa-1.73□□□□□ -2.69
CASC4-211ENST00000561305 CRHP06850 196 aa-1.73□□□□□ -2.69
CASC4-211ENST00000561305 IDO1P14902 403 aa-1.73□□□□□ -2.69
CASC4-211ENST00000561305 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-1.73□□□□□ -2.69
CASC4-211ENST00000561305 SSBP3-AS1Q7Z2R9 100 aa-1.73□□□□□ -2.69
CASC4-211ENST00000561305 LINC00269Q8N2A0 174 aa-1.73□□□□□ -2.69
CASC4-211ENST00000561305 SREK1IP1Q8N9Q2 155 aaPredicted RBP-1.73□□□□□ -2.69
CASC4-211ENST00000561305 SMIM11BQ8TCY0 68 aa-1.73□□□□□ -2.69
CASC4-211ENST00000561305 VPS13DQ5THJ4 4388 aa-1.73□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms