RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 TRGV9Q99603 122 aa10.98□□□□□ -0.65
RABGGTA-220ENST00000560998 NAV3Q8IVL0 2385 aa10.98□□□□□ -0.65
RABGGTA-220ENST00000560998 K7ERJ3 54 aa10.97□□□□□ -0.65
RABGGTA-220ENST00000560998 CRYGBP07316 175 aa10.97□□□□□ -0.65
RABGGTA-220ENST00000560998 FAM106CPP0CH98 169 aa10.97□□□□□ -0.65
RABGGTA-220ENST00000560998 EVI2AP22794 236 aa10.97□□□□□ -0.65
RABGGTA-220ENST00000560998 FAM106AQ4KMX7 169 aa10.97□□□□□ -0.65
RABGGTA-220ENST00000560998 FAM104BQ5XKR9 115 aa10.97□□□□□ -0.65
RABGGTA-220ENST00000560998 TMEM75Q8N9X5 138 aa10.97□□□□□ -0.65
RABGGTA-220ENST00000560998 VCX2Q9H322 139 aa10.97□□□□□ -0.65
RABGGTA-220ENST00000560998 TMEM14CQ9P0S9 112 aa10.97□□□□□ -0.65
RABGGTA-220ENST00000560998 IGHV1-3A0A0C4DH29 117 aa10.97□□□□□ -0.65
RABGGTA-220ENST00000560998 IGLV2-11P01706 119 aa10.97□□□□□ -0.65
RABGGTA-220ENST00000560998 RAB1BQ9H0U4 201 aa10.97□□□□□ -0.65
RABGGTA-220ENST00000560998 ATRXP46100 2492 aa10.97□□□□□ -0.65
RABGGTA-220ENST00000560998 ABCA4P78363 2273 aa10.97□□□□□ -0.65
RABGGTA-220ENST00000560998 TRBV25-1A0A075B6N4 114 aa10.96□□□□□ -0.65
RABGGTA-220ENST00000560998 SERTM2A0A1B0GWG4 89 aa10.96□□□□□ -0.65
RABGGTA-220ENST00000560998 LINC01546A6NGU7 62 aa10.96□□□□□ -0.65
RABGGTA-220ENST00000560998 LY6HO94772 140 aa10.96□□□□□ -0.65
RABGGTA-220ENST00000560998 COX7A1P24310 79 aa10.96□□□□□ -0.65
RABGGTA-220ENST00000560998 CNTFRP26992 372 aa10.96□□□□□ -0.65
RABGGTA-220ENST00000560998 SH2D6Q7Z4S9 175 aa10.96□□□□□ -0.65
RABGGTA-220ENST00000560998 PRNTQ86SH4 94 aa10.96□□□□□ -0.65
RABGGTA-220ENST00000560998 LY6G5BQ8NDX9 201 aa10.96□□□□□ -0.65
RABGGTA-220ENST00000560998 C1QTNF4Q9BXJ3 329 aa10.96□□□□□ -0.65
RABGGTA-220ENST00000560998 SPTBN4Q9H254 2564 aa10.96□□□□□ -0.65
RABGGTA-220ENST00000560998 PLXNB1O43157 2135 aa10.96□□□□□ -0.66
RABGGTA-220ENST00000560998 WI2-2373I1.2A0A1W2PRP0 233 aa10.96□□□□□ -0.66
RABGGTA-220ENST00000560998 H3BMG7 143 aa10.96□□□□□ -0.66
RABGGTA-220ENST00000560998 ORM2P19652 201 aa10.96□□□□□ -0.66
RABGGTA-220ENST00000560998 PVRIGQ6DKI7 326 aa10.96□□□□□ -0.66
RABGGTA-220ENST00000560998 C11orf71Q6IPW1 123 aa10.96□□□□□ -0.66
RABGGTA-220ENST00000560998 MRPL36Q9P0J6 103 aaKnown RBP10.96□□□□□ -0.66
RABGGTA-220ENST00000560998 ERG28Q9UKR5 140 aa10.96□□□□□ -0.66
RABGGTA-220ENST00000560998 TPRP12270 2363 aaKnown RBP10.96□□□□□ -0.66
RABGGTA-220ENST00000560998 LOC389332A0A1B0GUA5 103 aa10.95□□□□□ -0.66
RABGGTA-220ENST00000560998 NPIPB5A8MRT5 1133 aa10.95□□□□□ -0.66
RABGGTA-220ENST00000560998 LINC01619G3V211 115 aa10.95□□□□□ -0.66
RABGGTA-220ENST00000560998 LY6LH3BQJ8 138 aa10.95□□□□□ -0.66
RABGGTA-220ENST00000560998 APOMO95445 188 aa10.95□□□□□ -0.66
RABGGTA-220ENST00000560998 RPL27AP46776 148 aaKnown RBP10.95□□□□□ -0.66
RABGGTA-220ENST00000560998 RRN3P1Q2M238 152 aa10.95□□□□□ -0.66
RABGGTA-220ENST00000560998 DKK2Q9UBU2 259 aa10.95□□□□□ -0.66
RABGGTA-220ENST00000560998 SIGLEC9Q9Y336 463 aa10.95□□□□□ -0.66
RABGGTA-220ENST00000560998 LRBAP50851 2863 aa10.95□□□□□ -0.66
RABGGTA-220ENST00000560998 ZZEF1O43149 2961 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 IGHV3-48P01763 117 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 CRYGCP07315 174 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 ODF1Q14990 250 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 C12orf74Q32Q52 190 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 KLF17Q5JT82 389 aaPredicted RBP10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 ONECUT1Q9UBC0 465 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 HHLA3Q9XRX5 114 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 NBASA2RRP1 2371 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 A0A1B0GWB2 263 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 ATP5LO75964 103 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 IGKCP01834 107 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 SPINK8P0C7L1 97 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 TCTAP57738 103 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 FOXI1Q12951 378 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 ZNF562Q6V9R5 426 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 GOLT1AQ6ZVE7 132 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 RPEQ96AT9 228 aa10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 SLC25A39Q9BZJ4 359 aaPredicted RBP10.94□□□□□ -0.66
RABGGTA-220ENST00000560998 IGKV2D-26A0A0A0MRZ7 120 aa10.93□□□□□ -0.66
RABGGTA-220ENST00000560998 ATP5G2Q06055 141 aa10.93□□□□□ -0.66
RABGGTA-220ENST00000560998 HCP5Q6MZN7 132 aa10.93□□□□□ -0.66
RABGGTA-220ENST00000560998 TIMD4Q96H15 378 aa10.93□□□□□ -0.66
RABGGTA-220ENST00000560998 CDIP1Q9H305 208 aa10.93□□□□□ -0.66
RABGGTA-220ENST00000560998 DCHS2Q6V1P9 2916 aa10.93□□□□□ -0.66
RABGGTA-220ENST00000560998 TRAV8-1A0A0A6YYK1 113 aa10.92□□□□□ -0.66
RABGGTA-220ENST00000560998 ZNF785A8K8V0 405 aa10.92□□□□□ -0.66
RABGGTA-220ENST00000560998 TWIST1Q15672 202 aa10.92□□□□□ -0.66
RABGGTA-220ENST00000560998 HRNRQ86YZ3 2850 aaPredicted RBP10.92□□□□□ -0.66
RABGGTA-220ENST00000560998 DPM2O94777 84 aa10.92□□□□□ -0.66
RABGGTA-220ENST00000560998 TMEM95Q3KNT9 176 aa10.92□□□□□ -0.66
RABGGTA-220ENST00000560998 MRPL51Q4U2R6 128 aaKnown RBP10.92□□□□□ -0.66
RABGGTA-220ENST00000560998 PPP1R27Q86WC6 154 aa10.92□□□□□ -0.66
RABGGTA-220ENST00000560998 LYPD1Q8N2G4 141 aa10.92□□□□□ -0.66
RABGGTA-220ENST00000560998 RNF5Q99942 180 aa10.92□□□□□ -0.66
RABGGTA-220ENST00000560998 HIGD1AQ9Y241 93 aa10.92□□□□□ -0.66
RABGGTA-220ENST00000560998 TEX22C9J3V5 150 aa10.91□□□□□ -0.66
RABGGTA-220ENST00000560998 FCER1GP30273 86 aa10.91□□□□□ -0.66
RABGGTA-220ENST00000560998 RUSC1-AS1Q66K80 236 aa10.91□□□□□ -0.66
RABGGTA-220ENST00000560998 AMN1Q8IY45 258 aa10.91□□□□□ -0.66
RABGGTA-220ENST00000560998 SYT8Q8NBV8 401 aa10.91□□□□□ -0.66
RABGGTA-220ENST00000560998 C20orf78Q9BR46 151 aa10.91□□□□□ -0.66
RABGGTA-220ENST00000560998 FBXL15Q9H469 300 aa10.91□□□□□ -0.66
RABGGTA-220ENST00000560998 APELAP0DMC3 54 aa10.9□□□□□ -0.66
RABGGTA-220ENST00000560998 Q6ZUT4 128 aa10.9□□□□□ -0.66
RABGGTA-220ENST00000560998 OR11H6Q8NGC7 330 aa10.9□□□□□ -0.66
RABGGTA-220ENST00000560998 MAP1LC3AQ9H492 121 aa10.9□□□□□ -0.66
RABGGTA-220ENST00000560998 NXT2Q9NPJ8 142 aaKnown RBP10.9□□□□□ -0.66
RABGGTA-220ENST00000560998 PGPEP1Q9NXJ5 209 aa10.9□□□□□ -0.66
RABGGTA-220ENST00000560998 PSG8Q9UQ74 426 aa10.9□□□□□ -0.66
RABGGTA-220ENST00000560998 CKS2P33552 79 aa10.9□□□□□ -0.66
RABGGTA-220ENST00000560998 INSL3P51460 131 aa10.9□□□□□ -0.66
RABGGTA-220ENST00000560998 LY6DQ14210 128 aa10.9□□□□□ -0.66
RABGGTA-220ENST00000560998 DTX2Q86UW9 622 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms