RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 HYLS1Q96M11 299 aa9.25□□□□□ -0.93
CTDSPL2-209ENST00000560620 LINC00477Q96M19 166 aa9.25□□□□□ -0.93
CTDSPL2-209ENST00000560620 ODF3Q96PU9 254 aa9.25□□□□□ -0.93
CTDSPL2-209ENST00000560620 AGPAT4-IT1Q9H0P7 198 aa9.25□□□□□ -0.93
CTDSPL2-209ENST00000560620 Q9H3A6 140 aa9.25□□□□□ -0.93
CTDSPL2-209ENST00000560620 RPH3ALQ9UNE2 315 aa9.25□□□□□ -0.93
CTDSPL2-209ENST00000560620 BORCS7-ASMTA0A0B4J1R7 106 aa9.24□□□□□ -0.93
CTDSPL2-209ENST00000560620 GPX1P07203 203 aa9.24□□□□□ -0.93
CTDSPL2-209ENST00000560620 RNASE4P34096 147 aaKnown RBP9.24□□□□□ -0.93
CTDSPL2-209ENST00000560620 FAM74A1Q5RGS3 127 aa9.24□□□□□ -0.93
CTDSPL2-209ENST00000560620 LYPD1Q8N2G4 141 aa9.24□□□□□ -0.93
CTDSPL2-209ENST00000560620 CMTM2Q8TAZ6 248 aa9.24□□□□□ -0.93
CTDSPL2-209ENST00000560620 TMEM263Q8WUH6 116 aaKnown RBP9.24□□□□□ -0.93
CTDSPL2-209ENST00000560620 ZNF503Q96F45 646 aa9.24□□□□□ -0.93
CTDSPL2-209ENST00000560620 VGLL1Q99990 258 aa9.24□□□□□ -0.93
CTDSPL2-209ENST00000560620 TIMM8BQ9Y5J9 83 aaPredicted RBP9.24□□□□□ -0.93
CTDSPL2-209ENST00000560620 C7orf71A4D174 169 aa9.23□□□□□ -0.93
CTDSPL2-209ENST00000560620 SLC25A5P05141 298 aaKnown RBP9.23□□□□□ -0.93
CTDSPL2-209ENST00000560620 ATP6V0CP27449 155 aa9.23□□□□□ -0.93
CTDSPL2-209ENST00000560620 CDC34P49427 236 aaPredicted RBP9.23□□□□□ -0.93
CTDSPL2-209ENST00000560620 PQLC2Q6ZP29 291 aa9.23□□□□□ -0.93
CTDSPL2-209ENST00000560620 ZNF493Q6ZR52 646 aa9.23□□□□□ -0.93
CTDSPL2-209ENST00000560620 NOP10Q9NPE3 64 aaKnown RBP9.23□□□□□ -0.93
CTDSPL2-209ENST00000560620 TNFSF18Q9UNG2 199 aa9.23□□□□□ -0.93
CTDSPL2-209ENST00000560620 RNF222A6NCQ9 220 aa9.22□□□□□ -0.93
CTDSPL2-209ENST00000560620 SNURFLB1AK76 121 aa9.22□□□□□ -0.93
CTDSPL2-209ENST00000560620 ARPC5O15511 151 aa9.22□□□□□ -0.93
CTDSPL2-209ENST00000560620 MBP02144 154 aa9.22□□□□□ -0.93
CTDSPL2-209ENST00000560620 BTN1A1Q13410 526 aa9.22□□□□□ -0.93
CTDSPL2-209ENST00000560620 RPL7L1Q6DKI1 246 aaKnown RBP9.22□□□□□ -0.93
CTDSPL2-209ENST00000560620 C9orf47Q6ZRZ4 202 aa9.22□□□□□ -0.93
CTDSPL2-209ENST00000560620 IQCF2Q8IXL9 164 aa9.22□□□□□ -0.93
CTDSPL2-209ENST00000560620 Q8TAT8 98 aa9.22□□□□□ -0.93
CTDSPL2-209ENST00000560620 RXFP4Q8TDU9 374 aa9.22□□□□□ -0.93
CTDSPL2-209ENST00000560620 PYGO2Q9BRQ0 406 aa9.22□□□□□ -0.93
CTDSPL2-209ENST00000560620 PSMG3Q9BT73 122 aaPredicted RBP9.22□□□□□ -0.93
CTDSPL2-209ENST00000560620 SH3BGRL3Q9H299 93 aa9.22□□□□□ -0.93
CTDSPL2-209ENST00000560620 PGPA6NDG6 321 aa9.21□□□□□ -0.94
CTDSPL2-209ENST00000560620 CBY3A6NI87 242 aa9.21□□□□□ -0.94
CTDSPL2-209ENST00000560620 ARL14EPLP0DKL9 152 aa9.21□□□□□ -0.94
CTDSPL2-209ENST00000560620 ZNF138P52744 262 aa9.21□□□□□ -0.94
CTDSPL2-209ENST00000560620 SERF2P84101 59 aa9.21□□□□□ -0.94
CTDSPL2-209ENST00000560620 CD300CQ08708 224 aa9.21□□□□□ -0.94
CTDSPL2-209ENST00000560620 OR2G3Q8NGZ4 309 aa9.21□□□□□ -0.94
CTDSPL2-209ENST00000560620 RNASE8Q8TDE3 154 aaKnown RBP9.21□□□□□ -0.94
CTDSPL2-209ENST00000560620 GNPNAT1Q96EK6 184 aaPredicted RBP9.21□□□□□ -0.94
CTDSPL2-209ENST00000560620 ZNF492Q9P255 531 aa9.21□□□□□ -0.94
CTDSPL2-209ENST00000560620 ALMS1Q8TCU4 4167 aa9.2□□□□□ -0.94
CTDSPL2-209ENST00000560620 PLAC8L1A1L4L8 177 aa9.2□□□□□ -0.94
CTDSPL2-209ENST00000560620 F5H768 121 aa9.2□□□□□ -0.94
CTDSPL2-209ENST00000560620 SMLR1H3BR10 107 aa9.2□□□□□ -0.94
CTDSPL2-209ENST00000560620 RGS13O14921 159 aa9.2□□□□□ -0.94
CTDSPL2-209ENST00000560620 ATP5G1P05496 136 aa9.2□□□□□ -0.94
CTDSPL2-209ENST00000560620 P0DMU3 169 aa9.2□□□□□ -0.94
CTDSPL2-209ENST00000560620 FAM231AP0DMU4 169 aa9.2□□□□□ -0.94
CTDSPL2-209ENST00000560620 FAM231CP0DMU5 169 aa9.2□□□□□ -0.94
CTDSPL2-209ENST00000560620 ATP5G3P48201 142 aa9.2□□□□□ -0.94
CTDSPL2-209ENST00000560620 UBE2DNLQ8IWF7 75 aa9.2□□□□□ -0.94
CTDSPL2-209ENST00000560620 RAB24Q969Q5 203 aa9.2□□□□□ -0.94
CTDSPL2-209ENST00000560620 FAM210BQ96KR6 192 aa9.2□□□□□ -0.94
CTDSPL2-209ENST00000560620 ACTR3CQ9C0K3 210 aaPredicted RBP9.2□□□□□ -0.94
CTDSPL2-209ENST00000560620 OTORQ9NRC9 128 aa9.2□□□□□ -0.94
CTDSPL2-209ENST00000560620 RBAKDNA6NC62 111 aa9.19□□□□□ -0.94
CTDSPL2-209ENST00000560620 KLLNB2CW77 178 aa9.19□□□□□ -0.94
CTDSPL2-209ENST00000560620 DIRC3C9JPN6 131 aa9.19□□□□□ -0.94
CTDSPL2-209ENST00000560620 NMBP08949 121 aa9.19□□□□□ -0.94
CTDSPL2-209ENST00000560620 CRISP2P16562 243 aa9.19□□□□□ -0.94
CTDSPL2-209ENST00000560620 TMEM88Q6PEY1 159 aa9.19□□□□□ -0.94
CTDSPL2-209ENST00000560620 FAM19A4Q96LR4 140 aa9.19□□□□□ -0.94
CTDSPL2-209ENST00000560620 GAGE12BA1L429 117 aa9.18□□□□□ -0.94
CTDSPL2-209ENST00000560620 TAAR5O14804 337 aa9.18□□□□□ -0.94
CTDSPL2-209ENST00000560620 GAGE7O76087 117 aa9.18□□□□□ -0.94
CTDSPL2-209ENST00000560620 CXorf1O96002 111 aa9.18□□□□□ -0.94
CTDSPL2-209ENST00000560620 GAGE12FP0CL80 117 aa9.18□□□□□ -0.94
CTDSPL2-209ENST00000560620 GAGE12GP0CL81 117 aa9.18□□□□□ -0.94
CTDSPL2-209ENST00000560620 GAGE12IP0CL82 117 aa9.18□□□□□ -0.94
CTDSPL2-209ENST00000560620 STAG3L2P0CL84 134 aa9.18□□□□□ -0.94
CTDSPL2-209ENST00000560620 STAG3L3P0CL85 134 aa9.18□□□□□ -0.94
CTDSPL2-209ENST00000560620 AKR1C8PQ5T2L2 129 aa9.18□□□□□ -0.94
CTDSPL2-209ENST00000560620 GOLT1AQ6ZVE7 132 aa9.18□□□□□ -0.94
CTDSPL2-209ENST00000560620 EIF4E3Q8N5X7 224 aaKnown RBP9.18□□□□□ -0.94
CTDSPL2-209ENST00000560620 ZFAND2AQ8N6M9 145 aa9.18□□□□□ -0.94
CTDSPL2-209ENST00000560620 ZNF680Q8NEM1 530 aa9.18□□□□□ -0.94
CTDSPL2-209ENST00000560620 ARPC5LQ9BPX5 153 aa9.18□□□□□ -0.94
CTDSPL2-209ENST00000560620 ZNF324O75467 553 aaPredicted RBP9.17□□□□□ -0.94
CTDSPL2-209ENST00000560620 GCHFRP30047 84 aa9.17□□□□□ -0.94
CTDSPL2-209ENST00000560620 PRR9Q5T870 116 aa9.17□□□□□ -0.94
CTDSPL2-209ENST00000560620 GSN-AS1Q9NRJ2 163 aa9.17□□□□□ -0.94
CTDSPL2-209ENST00000560620 IGHV1OR15-1A0A075B7D0 117 aa9.16□□□□□ -0.94
CTDSPL2-209ENST00000560620 G3V3Q6 166 aa9.16□□□□□ -0.94
CTDSPL2-209ENST00000560620 NUDT3O95989 172 aa9.16□□□□□ -0.94
CTDSPL2-209ENST00000560620 GNG5P63218 68 aa9.16□□□□□ -0.94
CTDSPL2-209ENST00000560620 OR5I1Q13606 314 aa9.16□□□□□ -0.94
CTDSPL2-209ENST00000560620 MUC21Q5SSG8 566 aa9.16□□□□□ -0.94
CTDSPL2-209ENST00000560620 C15orf53Q8NAA6 179 aa9.16□□□□□ -0.94
CTDSPL2-209ENST00000560620 TMEM167BQ9NRX6 74 aa9.16□□□□□ -0.94
CTDSPL2-209ENST00000560620 DNAH1Q9P2D7 4330 aa9.16□□□□□ -0.94
CTDSPL2-209ENST00000560620 TRGV2A0A075B6R0 118 aa9.15□□□□□ -0.94
CTDSPL2-209ENST00000560620 TRGV1A0A0A0MS02 117 aa9.15□□□□□ -0.94
CTDSPL2-209ENST00000560620 TRBV7-9A0A0J9YWB2 115 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms