RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 RNASE8Q8TDE3 154 aaKnown RBP8.81□□□□□ -1
SMAD3-208ENST00000558827 FXYD5Q96DB9 178 aa8.81□□□□□ -1
SMAD3-208ENST00000558827 AAMDCQ9H7C9 122 aa8.81□□□□□ -1
SMAD3-208ENST00000558827 NACAE9PAV3 2078 aa8.81□□□□□ -1
SMAD3-208ENST00000558827 HMGB3O15347 200 aaKnown RBP8.8□□□□□ -1
SMAD3-208ENST00000558827 ZNF253O75346 499 aa8.8□□□□□ -1
SMAD3-208ENST00000558827 PTTG1O95997 202 aa8.8□□□□□ -1
SMAD3-208ENST00000558827 ATP5G1P05496 136 aa8.8□□□□□ -1
SMAD3-208ENST00000558827 ATP5G3P48201 142 aa8.8□□□□□ -1
SMAD3-208ENST00000558827 OR5I1Q13606 314 aa8.8□□□□□ -1
SMAD3-208ENST00000558827 PRR9Q5T870 116 aa8.8□□□□□ -1
SMAD3-208ENST00000558827 Q8TAT8 98 aa8.8□□□□□ -1
SMAD3-208ENST00000558827 TMEM263Q8WUH6 116 aaKnown RBP8.8□□□□□ -1
SMAD3-208ENST00000558827 ZNF503Q96F45 646 aa8.8□□□□□ -1
SMAD3-208ENST00000558827 PRELID1Q9Y255 219 aa8.8□□□□□ -1
SMAD3-208ENST00000558827 A0A0J9YY99 117 aa8.79□□□□□ -1
SMAD3-208ENST00000558827 C7orf71A4D174 169 aa8.79□□□□□ -1
SMAD3-208ENST00000558827 CBY3A6NI87 242 aa8.79□□□□□ -1
SMAD3-208ENST00000558827 PET100P0DJ07 73 aa8.79□□□□□ -1
SMAD3-208ENST00000558827 ZNF493Q6ZR52 646 aa8.79□□□□□ -1
SMAD3-208ENST00000558827 MRPL53Q96EL3 112 aaKnown RBP8.79□□□□□ -1
SMAD3-208ENST00000558827 FAM210BQ96KR6 192 aa8.79□□□□□ -1
SMAD3-208ENST00000558827 HYLS1Q96M11 299 aa8.79□□□□□ -1
SMAD3-208ENST00000558827 LINC00477Q96M19 166 aa8.79□□□□□ -1
SMAD3-208ENST00000558827 MRPL32Q9BYC8 188 aaKnown RBP8.79□□□□□ -1
SMAD3-208ENST00000558827 GSN-AS1Q9NRJ2 163 aa8.79□□□□□ -1
SMAD3-208ENST00000558827 KCNIP2Q9NS61 270 aa8.79□□□□□ -1
SMAD3-208ENST00000558827 RPH3ALQ9UNE2 315 aa8.79□□□□□ -1
SMAD3-208ENST00000558827 SNURFLB1AK76 121 aa8.78□□□□□ -1
SMAD3-208ENST00000558827 GPX1P07203 203 aa8.78□□□□□ -1
SMAD3-208ENST00000558827 RAB2AP61019 212 aa8.78□□□□□ -1
SMAD3-208ENST00000558827 UBE2L3P68036 154 aaKnown RBP8.78□□□□□ -1
SMAD3-208ENST00000558827 PDE6HQ13956 83 aa8.78□□□□□ -1
SMAD3-208ENST00000558827 Q5BKY6 102 aa8.78□□□□□ -1
SMAD3-208ENST00000558827 TMEM78Q5T7P6 136 aa8.78□□□□□ -1
SMAD3-208ENST00000558827 Q6ZTI0 123 aa8.78□□□□□ -1
SMAD3-208ENST00000558827 C20orf144Q9BQM9 153 aa8.78□□□□□ -1
SMAD3-208ENST00000558827 ATG101Q9BSB4 218 aa8.78□□□□□ -1
SMAD3-208ENST00000558827 MED28Q9H204 178 aa8.78□□□□□ -1
SMAD3-208ENST00000558827 Q9H3A6 140 aa8.78□□□□□ -1
SMAD3-208ENST00000558827 TP53TG3Q9ULZ0 132 aa8.78□□□□□ -1
SMAD3-208ENST00000558827 SLC25A5P05141 298 aaKnown RBP8.77□□□□□ -1.01
SMAD3-208ENST00000558827 RGS21Q2M5E4 152 aa8.77□□□□□ -1.01
SMAD3-208ENST00000558827 C9orf47Q6ZRZ4 202 aa8.77□□□□□ -1.01
SMAD3-208ENST00000558827 ODF3Q96PU9 254 aa8.77□□□□□ -1.01
SMAD3-208ENST00000558827 KLF12Q9Y4X4 402 aa8.77□□□□□ -1.01
SMAD3-208ENST00000558827 FAT2Q9NYQ8 4349 aa8.76□□□□□ -1.01
SMAD3-208ENST00000558827 TRAV26-1A0A087WT03 109 aa8.76□□□□□ -1.01
SMAD3-208ENST00000558827 KLLNB2CW77 178 aa8.76□□□□□ -1.01
SMAD3-208ENST00000558827 RTL8CO15255 209 aa8.76□□□□□ -1.01
SMAD3-208ENST00000558827 ZNF324O75467 553 aaPredicted RBP8.76□□□□□ -1.01
SMAD3-208ENST00000558827 HOXA5P20719 270 aa8.76□□□□□ -1.01
SMAD3-208ENST00000558827 MUC21Q5SSG8 566 aa8.76□□□□□ -1.01
SMAD3-208ENST00000558827 ZFAND2AQ8N6M9 145 aa8.76□□□□□ -1.01
SMAD3-208ENST00000558827 HSD17B11Q8NBQ5 300 aa8.76□□□□□ -1.01
SMAD3-208ENST00000558827 FAM19A4Q96LR4 140 aa8.76□□□□□ -1.01
SMAD3-208ENST00000558827 PYGO2Q9BRQ0 406 aa8.76□□□□□ -1.01
SMAD3-208ENST00000558827 TMPRSS5Q9H3S3 457 aa8.76□□□□□ -1.01
SMAD3-208ENST00000558827 ZNF492Q9P255 531 aa8.76□□□□□ -1.01
SMAD3-208ENST00000558827 TRGV1A0A0A0MS02 117 aa8.75□□□□□ -1.01
SMAD3-208ENST00000558827 PGPA6NDG6 321 aa8.75□□□□□ -1.01
SMAD3-208ENST00000558827 RGS13O14921 159 aa8.75□□□□□ -1.01
SMAD3-208ENST00000558827 IGHV3-53P01767 116 aa8.75□□□□□ -1.01
SMAD3-208ENST00000558827 CSN1S1P47710 185 aa8.75□□□□□ -1.01
SMAD3-208ENST00000558827 ZNF138P52744 262 aa8.75□□□□□ -1.01
SMAD3-208ENST00000558827 ACOT6Q3I5F7 207 aaPredicted RBP8.75□□□□□ -1.01
SMAD3-208ENST00000558827 KHDC3LQ587J8 217 aa8.75□□□□□ -1.01
SMAD3-208ENST00000558827 EIF4E3Q8N5X7 224 aaKnown RBP8.75□□□□□ -1.01
SMAD3-208ENST00000558827 C15orf53Q8NAA6 179 aa8.75□□□□□ -1.01
SMAD3-208ENST00000558827 HECTD4Q9Y4D8 3996 aa8.75□□□□□ -1.01
SMAD3-208ENST00000558827 MUC4Q99102 2169 aa8.74□□□□□ -1.01
SMAD3-208ENST00000558827 A0A1W2PPV4 95 aa8.74□□□□□ -1.01
SMAD3-208ENST00000558827 PRSS29PA6NIE9 313 aa8.74□□□□□ -1.01
SMAD3-208ENST00000558827 CRISP2P16562 243 aa8.74□□□□□ -1.01
SMAD3-208ENST00000558827 TAS2R45P59539 299 aa8.74□□□□□ -1.01
SMAD3-208ENST00000558827 GNG5P63218 68 aa8.74□□□□□ -1.01
SMAD3-208ENST00000558827 RNF212Q495C1 297 aa8.74□□□□□ -1.01
SMAD3-208ENST00000558827 C11orf72Q8NBR9 251 aa8.74□□□□□ -1.01
SMAD3-208ENST00000558827 OR10G4Q8NGN3 311 aa8.74□□□□□ -1.01
SMAD3-208ENST00000558827 OR10G9Q8NGN4 311 aa8.74□□□□□ -1.01
SMAD3-208ENST00000558827 OR10G7Q8NGN6 311 aa8.74□□□□□ -1.01
SMAD3-208ENST00000558827 GNPNAT1Q96EK6 184 aaPredicted RBP8.74□□□□□ -1.01
SMAD3-208ENST00000558827 SGK494Q96LW2 274 aa8.74□□□□□ -1.01
SMAD3-208ENST00000558827 MRPL16Q9NX20 251 aaKnown RBP8.74□□□□□ -1.01
SMAD3-208ENST00000558827 TRGV2A0A075B6R0 118 aa8.73□□□□□ -1.01
SMAD3-208ENST00000558827 IGHV1OR15-1A0A075B7D0 117 aa8.73□□□□□ -1.01
SMAD3-208ENST00000558827 DIRC3C9JPN6 131 aa8.73□□□□□ -1.01
SMAD3-208ENST00000558827 M6PRP20645 277 aa8.73□□□□□ -1.01
SMAD3-208ENST00000558827 LGALS9BQ3B8N2 356 aa8.73□□□□□ -1.01
SMAD3-208ENST00000558827 Q6ZR54 194 aa8.73□□□□□ -1.01
SMAD3-208ENST00000558827 LINC00612Q8N6U2 182 aa8.73□□□□□ -1.01
SMAD3-208ENST00000558827 LINC00588Q9Y4M8 146 aa8.73□□□□□ -1.01
SMAD3-208ENST00000558827 FXYD6-FXYD2A0A087WZ82 144 aa8.72□□□□□ -1.01
SMAD3-208ENST00000558827 ATP6V0CP27449 155 aa8.72□□□□□ -1.01
SMAD3-208ENST00000558827 GOLT1AQ6ZVE7 132 aa8.72□□□□□ -1.01
SMAD3-208ENST00000558827 SSX7Q7RTT5 188 aa8.72□□□□□ -1.01
SMAD3-208ENST00000558827 ARPC5LQ9BPX5 153 aa8.72□□□□□ -1.01
SMAD3-208ENST00000558827 SH3BGRL3Q9H299 93 aa8.72□□□□□ -1.01
SMAD3-208ENST00000558827 NAGKQ9UJ70 344 aa8.72□□□□□ -1.01
SMAD3-208ENST00000558827 TRAV8-1A0A0A6YYK1 113 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms