RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 NRN1Q9NPD7 142 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 BATF3Q9NR55 127 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 ZNF586Q9NXT0 402 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 WDR83OSQ9Y284 106 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 VPS13DQ5THJ4 4388 aa3.02□□□□□ -1.93
SPG11-211ENST00000558561 DNAH10Q8IVF4 4471 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 ALMS1Q8TCU4 4167 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 IGHV3OR16-12A0A075B7B8 117 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 TRAV2A0A0B4J234 112 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 KIR2DL5BA0A0G2JN68 375 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 KIR2DL5BA0A0G2JPC4 375 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 A0A0J9YX75 114 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 ZNF705GA8MUZ8 300 aaPredicted RBP3.01□□□□□ -1.93
SPG11-211ENST00000558561 G3V3Q6 166 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 HYPMO75409 117 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 MPC2O95563 127 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 PYYP10082 97 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 CAMLGP49069 296 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 SULT1A1P50225 295 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 APOC4P55056 127 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 TAS2R30P59541 319 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 ERCC8Q13216 396 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 CLINT1Q14677 625 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 C12orf74Q32Q52 190 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 MIR17HGQ75NE6 70 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 LINC00305Q7Z4B0 112 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 STHQ8IWL8 128 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 KIR2DL5AQ8N109 375 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 Q8NAQ8 132 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 OR5C1Q8NGR4 320 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 KIR2DL5BQ8NHK3 375 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 PHLDA1Q8WV24 401 aaPredicted RBP3.01□□□□□ -1.93
SPG11-211ENST00000558561 PPP1R1CQ8WVI7 109 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 FAM167A-AS1Q96KT0 104 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 SAV1Q9H4B6 383 aaPredicted RBP3.01□□□□□ -1.93
SPG11-211ENST00000558561 GPN1Q9HCN4 374 aaPredicted RBP3.01□□□□□ -1.93
SPG11-211ENST00000558561 DNAJC4Q9NNZ3 241 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 LYRM2Q9NU23 88 aaPredicted RBP3.01□□□□□ -1.93
SPG11-211ENST00000558561 HIGD1AQ9Y241 93 aa3.01□□□□□ -1.93
SPG11-211ENST00000558561 A0A087X002 238 aa3□□□□□ -1.93
SPG11-211ENST00000558561 LCE6AA0A183 80 aa3□□□□□ -1.93
SPG11-211ENST00000558561 UBE2L5PA0A1B0GUS4 154 aa3□□□□□ -1.93
SPG11-211ENST00000558561 ZNF705EA8MWA4 302 aaPredicted RBP3□□□□□ -1.93
SPG11-211ENST00000558561 M0R2Z0 102 aa3□□□□□ -1.93
SPG11-211ENST00000558561 M0R3E3 92 aa3□□□□□ -1.93
SPG11-211ENST00000558561 HMGB3O15347 200 aaKnown RBP3□□□□□ -1.93
SPG11-211ENST00000558561 SSNA1O43805 119 aa3□□□□□ -1.93
SPG11-211ENST00000558561 CT45A10P0DMU9 189 aa3□□□□□ -1.93
SPG11-211ENST00000558561 IGLC2P0DOY2 106 aa3□□□□□ -1.93
SPG11-211ENST00000558561 SPP1P10451 314 aa3□□□□□ -1.93
SPG11-211ENST00000558561 HLA-DRB4P13762 266 aa3□□□□□ -1.93
SPG11-211ENST00000558561 FGF7P21781 194 aa3□□□□□ -1.93
SPG11-211ENST00000558561 BMI1P35226 326 aa3□□□□□ -1.93
SPG11-211ENST00000558561 CNN1P51911 297 aaKnown RBP3□□□□□ -1.93
SPG11-211ENST00000558561 AP2S1P53680 142 aaPredicted RBP3□□□□□ -1.93
SPG11-211ENST00000558561 EMP1P54849 157 aa3□□□□□ -1.93
SPG11-211ENST00000558561 CMC4P56277 68 aaPredicted RBP3□□□□□ -1.93
SPG11-211ENST00000558561 BAXQ07812 192 aa3□□□□□ -1.93
SPG11-211ENST00000558561 PSG3Q16557 428 aa3□□□□□ -1.93
SPG11-211ENST00000558561 SPINK13Q1W4C9 94 aa3□□□□□ -1.93
SPG11-211ENST00000558561 C1orf194Q5T5A4 169 aa3□□□□□ -1.93
SPG11-211ENST00000558561 PRR27Q6MZM9 219 aa3□□□□□ -1.93
SPG11-211ENST00000558561 EXOC3-AS1Q8N2X6 119 aa3□□□□□ -1.93
SPG11-211ENST00000558561 RPP25LQ8N5L8 163 aaKnown RBP3□□□□□ -1.93
SPG11-211ENST00000558561 TMEM147Q9BVK8 224 aa3□□□□□ -1.93
SPG11-211ENST00000558561 NMES1Q9C002 83 aa3□□□□□ -1.93
SPG11-211ENST00000558561 TMEM231Q9H6L2 316 aa3□□□□□ -1.93
SPG11-211ENST00000558561 SLC39A9Q9NUM3 307 aa3□□□□□ -1.93
SPG11-211ENST00000558561 UQCC1Q9NVA1 299 aa3□□□□□ -1.93
SPG11-211ENST00000558561 PYGO1Q9Y3Y4 419 aa3□□□□□ -1.93
SPG11-211ENST00000558561 PXMP4Q9Y6I8 212 aa3□□□□□ -1.93
SPG11-211ENST00000558561 HLA-DRB4X5D2U9 266 aa3□□□□□ -1.93
SPG11-211ENST00000558561 PLAC8L1A1L4L8 177 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 A8MTW9 85 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 OR10J4P0C629 311 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 RPL12P30050 165 aaKnown RBP2.99□□□□□ -1.93
SPG11-211ENST00000558561 S100A11P31949 105 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 RPL29P47914 159 aaKnown RBP2.99□□□□□ -1.93
SPG11-211ENST00000558561 B2MP61769 119 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 PSG9Q00887 426 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 C14orf177Q52M58 125 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 PRR9Q5T870 116 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 C10orf113Q5VZT2 155 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 CEMP1Q6PRD7 247 aaPredicted RBP2.99□□□□□ -1.93
SPG11-211ENST00000558561 ZNF705AQ6ZN79 300 aaPredicted RBP2.99□□□□□ -1.93
SPG11-211ENST00000558561 FOXI2Q6ZQN5 318 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 SSX7Q7RTT5 188 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 BAP18Q8IXM2 172 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 OR8A1Q8NGG7 326 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 C11orf45Q8TAV5 145 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 BLNKQ8WV28 456 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 NARS2Q96I59 477 aaKnown RBP2.99□□□□□ -1.93
SPG11-211ENST00000558561 VGLL1Q99990 258 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 GGACTQ9BVM4 153 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 SLC25A2Q9BXI2 301 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 NPCDR1Q9BY65 106 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 WDR61Q9GZS3 305 aaKnown RBP2.99□□□□□ -1.93
SPG11-211ENST00000558561 MFFQ9GZY8 342 aa2.99□□□□□ -1.93
SPG11-211ENST00000558561 ZNF331Q9NQX6 463 aaPredicted RBP2.99□□□□□ -1.93
SPG11-211ENST00000558561 MBD2Q9UBB5 411 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms