RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ATP5EP2Q5VTU8 51 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 TMEM14EPQ6UXP3 125 aa7.23□□□□□ -1.25
SYNE3-205ENST00000557275 IGHV3-11P01762 117 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 HIGD2BQ4VC39 106 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 KIAA1671Q9BY89 1806 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 ZNF493Q6ZR52 646 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 SIGLEC8Q9NYZ4 499 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 IGHV2-26A0A0B4J1V2 119 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 J3QQQ9 107 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 ATRAIDQ6UW56 229 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 TFF2Q03403 129 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 SLC25A29Q8N8R3 303 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 SRXN1Q9BYN0 137 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 PCNX3Q9H6A9 2034 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 C4orf48Q5BLP8 95 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 OPRPNQ99935 248 aaPredicted RBP7.22□□□□□ -1.25
SYNE3-205ENST00000557275 TRBV6-6A0A0A6YYG2 114 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 FAM231DQ6ZW35 169 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 Q71RC1 249 aaPredicted RBP7.22□□□□□ -1.25
SYNE3-205ENST00000557275 NREPQ16612 68 aa7.22□□□□□ -1.25
SYNE3-205ENST00000557275 H3BMG7 143 aa7.21□□□□□ -1.25
SYNE3-205ENST00000557275 Q6ZS49 121 aa7.21□□□□□ -1.25
SYNE3-205ENST00000557275 EXOC3-AS1Q8N2X6 119 aa7.21□□□□□ -1.25
SYNE3-205ENST00000557275 C11orf44Q8N8P7 122 aa7.21□□□□□ -1.25
SYNE3-205ENST00000557275 MCRIP2Q9BUT9 160 aaKnown RBP7.21□□□□□ -1.25
SYNE3-205ENST00000557275 CGB7P0DN87 165 aa7.21□□□□□ -1.25
SYNE3-205ENST00000557275 AMELYQ99218 206 aa7.21□□□□□ -1.25
SYNE3-205ENST00000557275 SPINK2P20155 84 aa7.21□□□□□ -1.25
SYNE3-205ENST00000557275 DAD1P61803 113 aa7.21□□□□□ -1.26
SYNE3-205ENST00000557275 IL9P15248 144 aa7.21□□□□□ -1.26
SYNE3-205ENST00000557275 WISP3O95389 354 aaPredicted RBP7.21□□□□□ -1.26
SYNE3-205ENST00000557275 DEPPQ9NTK1 212 aa7.21□□□□□ -1.26
SYNE3-205ENST00000557275 ADAMTS9Q9P2N4 1935 aa7.21□□□□□ -1.26
SYNE3-205ENST00000557275 ADAMTSL1Q8N6G6 1762 aa7.21□□□□□ -1.26
SYNE3-205ENST00000557275 FAM236AA0A1B0GUQ0 79 aa7.21□□□□□ -1.26
SYNE3-205ENST00000557275 FAM236BA0A1B0GV22 79 aa7.21□□□□□ -1.26
SYNE3-205ENST00000557275 PEBP1P30086 187 aaKnown RBP7.21□□□□□ -1.26
SYNE3-205ENST00000557275 A0A1W2PRX2 142 aa7.21□□□□□ -1.26
SYNE3-205ENST00000557275 C5orf64Q2M2E5 130 aa7.21□□□□□ -1.26
SYNE3-205ENST00000557275 DEFB125Q8N687 156 aa7.21□□□□□ -1.26
SYNE3-205ENST00000557275 KLF2Q9Y5W3 355 aaPredicted RBP7.21□□□□□ -1.26
SYNE3-205ENST00000557275 CELA2BP08218 269 aaPredicted RBP7.21□□□□□ -1.26
SYNE3-205ENST00000557275 NRXN2Q9P2S2 1712 aa7.2□□□□□ -1.26
SYNE3-205ENST00000557275 BAALC-AS2P0C853 105 aa7.2□□□□□ -1.26
SYNE3-205ENST00000557275 C18orf32Q8TCD1 76 aa7.2□□□□□ -1.26
SYNE3-205ENST00000557275 PSG7Q13046 419 aa7.2□□□□□ -1.26
SYNE3-205ENST00000557275 TMEM256Q8N2U0 113 aa7.2□□□□□ -1.26
SYNE3-205ENST00000557275 NAA38Q9BRA0 125 aaKnown RBP7.2□□□□□ -1.26
SYNE3-205ENST00000557275 SDHAF1A6NFY7 115 aa7.2□□□□□ -1.26
SYNE3-205ENST00000557275 TMEM256-PLSCR3K7ERE1 68 aa7.2□□□□□ -1.26
SYNE3-205ENST00000557275 CRYBA2P53672 197 aa7.2□□□□□ -1.26
SYNE3-205ENST00000557275 LY6G6FQ5SQ64 297 aa7.2□□□□□ -1.26
SYNE3-205ENST00000557275 SPTBN4Q9H254 2564 aa7.2□□□□□ -1.26
SYNE3-205ENST00000557275 CGB3P0DN86 165 aa7.2□□□□□ -1.26
SYNE3-205ENST00000557275 SS18L2Q9UHA2 77 aa7.2□□□□□ -1.26
SYNE3-205ENST00000557275 KIR2DL5BQ8NHK3 375 aa7.2□□□□□ -1.26
SYNE3-205ENST00000557275 CHCHD2Q9Y6H1 151 aaPredicted RBP7.2□□□□□ -1.26
SYNE3-205ENST00000557275 SHANK2-AS3Q9BTD1 123 aa7.2□□□□□ -1.26
SYNE3-205ENST00000557275 RPP25LQ8N5L8 163 aaKnown RBP7.2□□□□□ -1.26
SYNE3-205ENST00000557275 IGHV2-70P01814 119 aa7.2□□□□□ -1.26
SYNE3-205ENST00000557275 B4DSR2 109 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 SRRM5B3KS81 715 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 PFN2P35080 140 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 FAM216BQ8N7L0 139 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 C20orf173Q96LM9 149 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 PRSS29PA6NIE9 313 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 LENEPQ9Y5L5 61 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 COL5A3P25940 1745 aaPredicted RBP7.19□□□□□ -1.26
SYNE3-205ENST00000557275 SETD2Q9BYW2 2564 aaPredicted RBP7.19□□□□□ -1.26
SYNE3-205ENST00000557275 C10orf105Q8TEF2 133 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 S4R3C0 116 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 IGHV3-73A0A0B4J1V6 119 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 IGKV1-8A0A0C4DH67 115 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 NMSQ5H8A3 153 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 ZNF329Q86UD4 541 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 DMRTC2Q8IXT2 367 aaPredicted RBP7.19□□□□□ -1.26
SYNE3-205ENST00000557275 COL24A1Q17RW2 1714 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 ADAMTS7Q9UKP4 1686 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 RPL15P61313 204 aaKnown RBP7.19□□□□□ -1.26
SYNE3-205ENST00000557275 ETDCA0A1B0GVM5 59 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 VMO1Q7Z5L0 202 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 ALPK3Q96L96 1907 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 PPIFP30405 207 aaKnown RBP7.19□□□□□ -1.26
SYNE3-205ENST00000557275 POLR3KQ9Y2Y1 108 aaPredicted RBP7.19□□□□□ -1.26
SYNE3-205ENST00000557275 SMIM27A0A1W2PRY6 76 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 TMEM14CQ9P0S9 112 aa7.19□□□□□ -1.26
SYNE3-205ENST00000557275 TLN1Q9Y490 2541 aaKnown RBP7.18□□□□□ -1.26
SYNE3-205ENST00000557275 H3BT86 120 aa7.18□□□□□ -1.26
SYNE3-205ENST00000557275 SIGLEC9Q9Y336 463 aa7.18□□□□□ -1.26
SYNE3-205ENST00000557275 NOTCH4Q99466 2003 aa7.18□□□□□ -1.26
SYNE3-205ENST00000557275 ABCA12Q86UK0 2595 aa7.18□□□□□ -1.26
SYNE3-205ENST00000557275 CD55P08174 381 aa7.18□□□□□ -1.26
SYNE3-205ENST00000557275 IGHV1-8P0DP01 117 aa7.18□□□□□ -1.26
SYNE3-205ENST00000557275 CRYGCP07315 174 aa7.18□□□□□ -1.26
SYNE3-205ENST00000557275 U3KQE9 123 aa7.18□□□□□ -1.26
SYNE3-205ENST00000557275 IGHV1-69DA0A0B4J2H0 117 aa7.18□□□□□ -1.26
SYNE3-205ENST00000557275 YPEL3P61236 119 aaPredicted RBP7.18□□□□□ -1.26
SYNE3-205ENST00000557275 ARMS2P0C7Q2 107 aa7.18□□□□□ -1.26
SYNE3-205ENST00000557275 CFC1BP0CG36 223 aa7.18□□□□□ -1.26
SYNE3-205ENST00000557275 CFC1P0CG37 223 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms