RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 SUPT4H1P63272 117 aaKnown RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 HIST1H1AQ02539 215 aaPredicted RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 ZNF345Q14585 488 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 ZNF846Q147U1 533 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 KCNJ8Q15842 424 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 IQCJQ1A5X6 159 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 C12orf74Q32Q52 190 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 VMA21Q3ZAQ7 101 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 CCSMST1Q4G0I0 132 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 SFXN4Q6P4A7 337 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 Q6Q795 121 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 DPPA3Q6W0C5 159 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 OR5D14Q8NGL3 314 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 OR8D4Q8NGM9 314 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 OR2T10Q8NGZ9 312 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 STAG3L4Q8TBR4 150 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 SFT2D1Q8WV19 159 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 PP6455Q8WZ26 134 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 PSMF1Q92530 271 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 POP5Q969H6 163 aaKnown RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 TOMM6Q96B49 74 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 BORCS8Q96FH0 119 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 HYLS1Q96M11 299 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 ZNF714Q96N38 554 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 CIB3Q96Q77 187 aaPredicted RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 SCGB3A1Q96QR1 104 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 MGST2Q99735 147 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 HIST1H2BLQ99880 126 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 SNRNP25Q9BV90 132 aaKnown RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 SEC11CQ9BY50 192 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 DPY30Q9C005 99 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 WDR61Q9GZS3 305 aaKnown RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 POPDC3Q9HBV1 291 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 RPRMQ9NS64 109 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 FBXL12Q9NXK8 326 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 COA4Q9NYJ1 87 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 BET1LQ9NYM9 111 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 MRPL27Q9P0M9 148 aaKnown RBP0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 COMMD3Q9UBI1 195 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 ERG28Q9UKR5 140 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 FUT9Q9Y231 359 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 HIGD1AQ9Y241 93 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 HS3ST2Q9Y278 367 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 MPC1Q9Y5U8 109 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 IER3IP1Q9Y5U9 82 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 RFX7Q2KHR2 1363 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 PLIN4Q96Q06 1357 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 TNS3Q68CZ2 1445 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 TRAPPC8Q9Y2L5 1435 aa0.53□□□□□ -2.32
SUPT16H-206ENST00000556309 NKTRP30414 1462 aaKnown RBP0.53□□□□□ -2.33
SUPT16H-206ENST00000556309 MYOM2P54296 1465 aa0.53□□□□□ -2.33
SUPT16H-206ENST00000556309 MAGI1Q96QZ7 1491 aaPredicted RBP0.53□□□□□ -2.33
SUPT16H-206ENST00000556309 FYCO1Q9BQS8 1478 aa0.53□□□□□ -2.33
SUPT16H-206ENST00000556309 ARHGAP35Q9NRY4 1499 aa0.53□□□□□ -2.33
SUPT16H-206ENST00000556309 ABCC3O15438 1527 aa0.53□□□□□ -2.33
SUPT16H-206ENST00000556309 NISCHQ9Y2I1 1504 aa0.53□□□□□ -2.33
SUPT16H-206ENST00000556309 CCDC180Q9P1Z9 1646 aa0.53□□□□□ -2.33
SUPT16H-206ENST00000556309 TRAV2A0A0B4J234 112 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 TRAV13-1A0A0B4J241 112 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 TRAV4A0A0B4J268 109 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 IGHV1-58A0A0C4DH39 117 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 A0A0G2JMM0 328 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 A0A0J9YY10 115 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 C3orf85A0A1B0GTC6 90 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 A0A1B0GX78 115 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 A0A1W2PPB8 328 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 KANTRA0A1W2PQU2 76 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 KIR3DP1A8MWS1 328 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 ZNF670-ZNF695F2Z2N8 137 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 C17orf112F2Z3M2 114 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 F8W1H4 67 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 PDCD5O14737 125 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 UQCRQO14949 82 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 NPFFO15130 113 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 RER1O15258 196 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 NDUFC1O43677 76 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 SNCGO76070 127 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 SIX6O95475 246 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 ZNF682O95780 498 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 IGF2P01344 180 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 IGHV3-7P01780 117 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 MT-ND4LP03901 98 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 MT-ND6P03923 174 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 TRGC2P03986 189 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 PRM2P04554 102 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 SAA1P0DJI8 122 aaPredicted RBP0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 PYYP10082 97 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 FGF6P10767 208 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 COX6A1P12074 109 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 RPL7P18124 248 aaKnown RBP0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 SRIP30626 198 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 RPL22P35268 128 aaKnown RBP0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 GLRXP35754 106 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 ASIPP42127 132 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 NPC2P61916 151 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 UBA52P62987 128 aaKnown RBP0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 CCL20P78556 96 aa0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 DCDP81605 110 aaKnown RBP0.52□□□□□ -2.33
SUPT16H-206ENST00000556309 PLGLB1Q02325 96 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms