RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 FAM71F2Q6NXP2 309 aa13.34□□□□□ -0.27
PPP4R3A-208ENST00000555462 NUP37Q8NFH4 326 aa13.34□□□□□ -0.27
PPP4R3A-208ENST00000555462 GFRA4Q9GZZ7 299 aa13.34□□□□□ -0.27
PPP4R3A-208ENST00000555462 FER1L6-AS1Q8NA97 138 aa13.34□□□□□ -0.27
PPP4R3A-208ENST00000555462 NDUFS7O75251 213 aa13.33□□□□□ -0.28
PPP4R3A-208ENST00000555462 FXYD2P54710 66 aa13.33□□□□□ -0.28
PPP4R3A-208ENST00000555462 FOXC2Q99958 501 aa13.33□□□□□ -0.28
PPP4R3A-208ENST00000555462 SPCS1Q9Y6A9 102 aa13.33□□□□□ -0.28
PPP4R3A-208ENST00000555462 FGF6P10767 208 aa13.33□□□□□ -0.28
PPP4R3A-208ENST00000555462 DYNAPQ8N1N2 210 aa13.33□□□□□ -0.28
PPP4R3A-208ENST00000555462 SOX21Q9Y651 276 aaPredicted RBP13.33□□□□□ -0.28
PPP4R3A-208ENST00000555462 IGHV3OR16-10A0A075B7F0 116 aa13.32□□□□□ -0.28
PPP4R3A-208ENST00000555462 H3BRN7 92 aa13.32□□□□□ -0.28
PPP4R3A-208ENST00000555462 CRYGBP07316 175 aa13.32□□□□□ -0.28
PPP4R3A-208ENST00000555462 RBPJQ06330 500 aa13.32□□□□□ -0.28
PPP4R3A-208ENST00000555462 NHP2Q9NX24 153 aaKnown RBP13.32□□□□□ -0.28
PPP4R3A-208ENST00000555462 AMTNQ6UX39 209 aa13.32□□□□□ -0.28
PPP4R3A-208ENST00000555462 OR2K2Q8NGT1 345 aa13.32□□□□□ -0.28
PPP4R3A-208ENST00000555462 UTP20O75691 2785 aaKnown RBP13.32□□□□□ -0.28
PPP4R3A-208ENST00000555462 CACNA1AO00555 2505 aa13.32□□□□□ -0.28
PPP4R3A-208ENST00000555462 VSTM5A8MXK1 200 aa13.32□□□□□ -0.28
PPP4R3A-208ENST00000555462 K7ERU9 68 aa13.32□□□□□ -0.28
PPP4R3A-208ENST00000555462 HBDP02042 147 aa13.32□□□□□ -0.28
PPP4R3A-208ENST00000555462 OR1N2Q8NGR9 330 aa13.32□□□□□ -0.28
PPP4R3A-208ENST00000555462 TRGV3P03979 118 aa13.31□□□□□ -0.28
PPP4R3A-208ENST00000555462 LINC00311Q8N616 119 aa13.31□□□□□ -0.28
PPP4R3A-208ENST00000555462 INS-IGF2F8WCM5 200 aa13.31□□□□□ -0.28
PPP4R3A-208ENST00000555462 IL17RELQ6ZVW7 336 aa13.31□□□□□ -0.28
PPP4R3A-208ENST00000555462 MS4A6AQ9H2W1 248 aa13.31□□□□□ -0.28
PPP4R3A-208ENST00000555462 SMAD7O15105 426 aaKnown RBP13.3□□□□□ -0.28
PPP4R3A-208ENST00000555462 EFNA4P52798 201 aa13.3□□□□□ -0.28
PPP4R3A-208ENST00000555462 PIP4P1Q86T03 277 aa13.3□□□□□ -0.28
PPP4R3A-208ENST00000555462 WFDC12Q8WWY7 111 aa13.3□□□□□ -0.28
PPP4R3A-208ENST00000555462 NBR2O15453 112 aa13.3□□□□□ -0.28
PPP4R3A-208ENST00000555462 NDUFA3O95167 84 aa13.3□□□□□ -0.28
PPP4R3A-208ENST00000555462 PRR25Q96S07 402 aa13.3□□□□□ -0.28
PPP4R3A-208ENST00000555462 PTPN13Q12923 2485 aa13.3□□□□□ -0.28
PPP4R3A-208ENST00000555462 CDSNQ15517 529 aa13.3□□□□□ -0.28
PPP4R3A-208ENST00000555462 NACAE9PAV3 2078 aa13.29□□□□□ -0.28
PPP4R3A-208ENST00000555462 TNFRSF13BO14836 293 aaPredicted RBP13.29□□□□□ -0.28
PPP4R3A-208ENST00000555462 APOBEC3AP31941 199 aaPredicted RBP13.29□□□□□ -0.28
PPP4R3A-208ENST00000555462 TMEM158Q8WZ71 300 aa13.29□□□□□ -0.28
PPP4R3A-208ENST00000555462 FANCD2OSQ96PS1 177 aa13.29□□□□□ -0.28
PPP4R3A-208ENST00000555462 MYO9AB2RTY4 2548 aa13.29□□□□□ -0.28
PPP4R3A-208ENST00000555462 ZANQ9Y493 2812 aa13.29□□□□□ -0.28
PPP4R3A-208ENST00000555462 TRAV40A0A0B4J280 105 aa13.29□□□□□ -0.28
PPP4R3A-208ENST00000555462 ZNF672Q499Z4 452 aaPredicted RBP13.29□□□□□ -0.28
PPP4R3A-208ENST00000555462 C21orf62Q9NYP8 219 aa13.29□□□□□ -0.28
PPP4R3A-208ENST00000555462 LINC01548A6NM66 108 aa13.28□□□□□ -0.28
PPP4R3A-208ENST00000555462 CD3EP07766 207 aa13.28□□□□□ -0.28
PPP4R3A-208ENST00000555462 TMEM30BQ3MIR4 351 aa13.28□□□□□ -0.28
PPP4R3A-208ENST00000555462 ZC2HC1BQ5TFG8 222 aa13.28□□□□□ -0.28
PPP4R3A-208ENST00000555462 SMIM15Q7Z3B0 74 aa13.28□□□□□ -0.28
PPP4R3A-208ENST00000555462 S100A7AQ86SG5 101 aa13.28□□□□□ -0.28
PPP4R3A-208ENST00000555462 A6NDN8 102 aa13.28□□□□□ -0.28
PPP4R3A-208ENST00000555462 C9orf118A6NHY6 69 aa13.28□□□□□ -0.28
PPP4R3A-208ENST00000555462 G3V318 75 aa13.28□□□□□ -0.28
PPP4R3A-208ENST00000555462 PLP1P60201 277 aa13.28□□□□□ -0.28
PPP4R3A-208ENST00000555462 ASCL5Q7RTU5 278 aa13.28□□□□□ -0.28
PPP4R3A-208ENST00000555462 USP9XQ93008 2570 aaPredicted RBP13.27□□□□□ -0.28
PPP4R3A-208ENST00000555462 GTSF1LQ9H1H1 148 aa13.27□□□□□ -0.28
PPP4R3A-208ENST00000555462 IGF1P05019 195 aa13.27□□□□□ -0.29
PPP4R3A-208ENST00000555462 MFAP4P55083 255 aa13.27□□□□□ -0.29
PPP4R3A-208ENST00000555462 CSTL1Q9H114 145 aa13.27□□□□□ -0.29
PPP4R3A-208ENST00000555462 SMAD5-AS1Q9Y6J3 95 aa13.27□□□□□ -0.29
PPP4R3A-208ENST00000555462 CEACAM4O75871 244 aa13.26□□□□□ -0.29
PPP4R3A-208ENST00000555462 CLEC3BP05452 202 aa13.26□□□□□ -0.29
PPP4R3A-208ENST00000555462 EMP1P54849 157 aa13.26□□□□□ -0.29
PPP4R3A-208ENST00000555462 Q8NA96 180 aa13.26□□□□□ -0.29
PPP4R3A-208ENST00000555462 SMIM12Q96EX1 92 aa13.26□□□□□ -0.29
PPP4R3A-208ENST00000555462 TMEM14CQ9P0S9 112 aa13.26□□□□□ -0.29
PPP4R3A-208ENST00000555462 DPM3Q9P2X0 92 aa13.26□□□□□ -0.29
PPP4R3A-208ENST00000555462 GTF2H5Q6ZYL4 71 aa13.26□□□□□ -0.29
PPP4R3A-208ENST00000555462 GLMPQ8WWB7 406 aa13.26□□□□□ -0.29
PPP4R3A-208ENST00000555462 CFHR4Q92496 578 aa13.26□□□□□ -0.29
PPP4R3A-208ENST00000555462 HIF1ANQ9NWT6 349 aa13.26□□□□□ -0.29
PPP4R3A-208ENST00000555462 FAM208BQ5VWN6 2430 aa13.25□□□□□ -0.29
PPP4R3A-208ENST00000555462 MRPS12O15235 138 aaKnown RBP13.25□□□□□ -0.29
PPP4R3A-208ENST00000555462 TNFRSF6BO95407 300 aa13.25□□□□□ -0.29
PPP4R3A-208ENST00000555462 CLEC19AQ6UXS0 136 aa13.25□□□□□ -0.29
PPP4R3A-208ENST00000555462 BOD1L2Q8IYS8 172 aa13.25□□□□□ -0.29
PPP4R3A-208ENST00000555462 ARPC1AQ92747 370 aa13.25□□□□□ -0.29
PPP4R3A-208ENST00000555462 TMEM8BA6NDV4 472 aa13.25□□□□□ -0.29
PPP4R3A-208ENST00000555462 F8W735 103 aaPredicted RBP13.25□□□□□ -0.29
PPP4R3A-208ENST00000555462 SAMD5Q5TGI4 173 aa13.25□□□□□ -0.29
PPP4R3A-208ENST00000555462 TEX48A0A1B0GUV7 120 aa13.24□□□□□ -0.29
PPP4R3A-208ENST00000555462 SH2D6Q7Z4S9 175 aa13.24□□□□□ -0.29
PPP4R3A-208ENST00000555462 C11orf21Q9P2W6 132 aa13.24□□□□□ -0.29
PPP4R3A-208ENST00000555462 TGFAP01135 160 aa13.24□□□□□ -0.29
PPP4R3A-208ENST00000555462 C5orf64Q2M2E5 130 aa13.24□□□□□ -0.29
PPP4R3A-208ENST00000555462 ADAMTSL5Q6ZMM2 481 aa13.24□□□□□ -0.29
PPP4R3A-208ENST00000555462 NEGR1Q7Z3B1 354 aa13.24□□□□□ -0.29
PPP4R3A-208ENST00000555462 SMAGPQ0VAQ4 97 aa13.24□□□□□ -0.29
PPP4R3A-208ENST00000555462 MAPKAPK5-AS1Q8N8E1 139 aa13.24□□□□□ -0.29
PPP4R3A-208ENST00000555462 MAP1LC3AQ9H492 121 aa13.24□□□□□ -0.29
PPP4R3A-208ENST00000555462 MRPL35Q9NZE8 188 aaKnown RBP13.24□□□□□ -0.29
PPP4R3A-208ENST00000555462 WNK1Q9H4A3 2382 aa13.24□□□□□ -0.29
PPP4R3A-208ENST00000555462 CCL21O00585 134 aa13.23□□□□□ -0.29
PPP4R3A-208ENST00000555462 SEC11AP67812 179 aa13.23□□□□□ -0.29
PPP4R3A-208ENST00000555462 C15orf32Q32M92 178 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms