RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 STPG4Q8N801 248 aa5.59□□□□□ -1.51
SYNE2-216ENST00000555002 SEC61GP60059 68 aa5.59□□□□□ -1.51
SYNE2-216ENST00000555002 ZC2HC1BQ5TFG8 222 aa5.59□□□□□ -1.51
SYNE2-216ENST00000555002 CSRP1P21291 193 aaKnown RBP5.59□□□□□ -1.51
SYNE2-216ENST00000555002 LIME1Q9H400 295 aa5.59□□□□□ -1.51
SYNE2-216ENST00000555002 NOP10Q9NPE3 64 aaKnown RBP5.59□□□□□ -1.51
SYNE2-216ENST00000555002 CFHR2P36980 270 aa5.59□□□□□ -1.51
SYNE2-216ENST00000555002 LINC01559Q495D7 138 aa5.59□□□□□ -1.51
SYNE2-216ENST00000555002 LINC01590Q5TEZ4 76 aa5.59□□□□□ -1.51
SYNE2-216ENST00000555002 ZNRF2Q8NHG8 242 aa5.59□□□□□ -1.51
SYNE2-216ENST00000555002 ACANP16112 2415 aa5.59□□□□□ -1.52
SYNE2-216ENST00000555002 ATRAIDQ6UW56 229 aa5.59□□□□□ -1.52
SYNE2-216ENST00000555002 LINC01549A6NIU2 74 aa5.59□□□□□ -1.52
SYNE2-216ENST00000555002 C1orf43Q9BWL3 253 aa5.59□□□□□ -1.52
SYNE2-216ENST00000555002 IGHG2P01859 326 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 CARHSP1Q9Y2V2 147 aaKnown RBP5.58□□□□□ -1.52
SYNE2-216ENST00000555002 SIGLEC9Q9Y336 463 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 MSMBP08118 114 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 LINC00271P0C7V0 271 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 IFITM3Q01628 133 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 PRR30Q53SZ7 412 aaPredicted RBP5.58□□□□□ -1.52
SYNE2-216ENST00000555002 GAFA1Q96PS6 74 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 TLN2Q9Y4G6 2542 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 SIPA1L3O60292 1781 aaPredicted RBP5.58□□□□□ -1.52
SYNE2-216ENST00000555002 A0A087WV48 116 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 HIST1H2BKO60814 126 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 HIST1H2BJP06899 126 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 HIST1H2BOP23527 126 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 HIST1H2BBP33778 126 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 HIST1H2BDP58876 126 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 HIST1H2BCP62807 126 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 HIST2H2BEQ16778 126 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.58□□□□□ -1.52
SYNE2-216ENST00000555002 HIST1H2BHQ93079 126 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 HIST1H2BNQ99877 126 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 HIST1H2BMQ99879 126 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 LRRK2Q5S007 2527 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 HLA-DRB4P13762 266 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 HLA-DRB4X5D2U9 266 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 TMEM213A2RRL7 107 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 RHODO00212 210 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 IGLV3-21P80748 117 aaPredicted RBP5.58□□□□□ -1.52
SYNE2-216ENST00000555002 PKIGQ9Y2B9 76 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 TRAV13-2A0A0B4J235 113 aa5.58□□□□□ -1.52
SYNE2-216ENST00000555002 LYPD2Q6UXB3 125 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 Q86TA4 180 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 CFHR4Q92496 578 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 C9orf47Q6ZRZ4 202 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 SYS1-DBNDD2H3BUS1 97 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 J3QKU1 62 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 IFITM2Q01629 132 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 TREML4Q6UXN2 200 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 NDUFA12Q9UI09 145 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 ATP6V0E1O15342 81 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 BUB3O43684 328 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 TMEM141Q96I45 108 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 IGLV10-54A0A075B6I4 117 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 CT83Q5H943 113 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 HEPN1Q6WQI6 88 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 CD177Q8N6Q3 437 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 IGHV1OR15-1A0A075B7D0 117 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 SMIM10L1P0DMW3 83 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 SMIM10Q96HG1 83 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 CARD19Q96LW7 228 aa5.57□□□□□ -1.52
SYNE2-216ENST00000555002 IGKV1D-12P01611 117 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 MP68P56378 58 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 GLRX5Q86SX6 157 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 EXPH5Q8NEV8 1989 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 A8MWP6 167 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 G3V318 75 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 IL18BPO95998 194 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 CR1LQ2VPA4 569 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 COL18A1P39060 1754 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 OOSP1A8MZH6 123 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 GREM1O60565 184 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 UTF1Q5T230 341 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 NDUFB1O75438 58 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 ACYP1P07311 99 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 FUSP35637 526 aaKnown RBP eCLIP5.56□□□□□ -1.52
SYNE2-216ENST00000555002 RNF183Q96D59 192 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 NLRC5Q86WI3 1866 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 IGHV1-24A0A0C4DH33 117 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 K7ERJ3 54 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 AMBPP02760 352 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 COX7B2Q8TF08 81 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 LRRC37AA6NMS7 1700 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 IFITM1P13164 125 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 RPP25LQ8N5L8 163 aaKnown RBP5.56□□□□□ -1.52
SYNE2-216ENST00000555002 MYO9AB2RTY4 2548 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 TRBV20-1A0A075B6N2 111 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 UBE2CO00762 179 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 DEFB136Q30KP8 78 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 SHANK2-AS3Q9BTD1 123 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 MRPL36Q9P0J6 103 aaKnown RBP5.56□□□□□ -1.52
SYNE2-216ENST00000555002 IGKV1D-8A0A087WSZ0 117 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 BOD1L2Q8IYS8 172 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 AGMATQ9BSE5 352 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 CEP192Q8TEP8 1941 aa5.56□□□□□ -1.52
SYNE2-216ENST00000555002 ZNF106Q9H2Y7 1883 aaKnown RBP5.56□□□□□ -1.52
SYNE2-216ENST00000555002 PPDPFLQ8WWR9 84 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms