RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 HECTD4Q9Y4D8 3996 aa10.84□□□□□ -0.67
SHMT2-208ENST00000553868 IGKV3-7A0A075B6H7 116 aa10.84□□□□□ -0.67
SHMT2-208ENST00000553868 DIRC3C9JPN6 131 aa10.84□□□□□ -0.67
SHMT2-208ENST00000553868 SOCS3O14543 225 aa10.84□□□□□ -0.67
SHMT2-208ENST00000553868 GNG4P50150 75 aa10.84□□□□□ -0.67
SHMT2-208ENST00000553868 SNRPD3P62318 126 aaKnown RBP10.84□□□□□ -0.67
SHMT2-208ENST00000553868 TMEM183BQ1AE95 376 aa10.84□□□□□ -0.67
SHMT2-208ENST00000553868 LCN12Q6JVE5 192 aa10.84□□□□□ -0.67
SHMT2-208ENST00000553868 GOLT1AQ6ZVE7 132 aa10.84□□□□□ -0.67
SHMT2-208ENST00000553868 MS4A6AQ9H2W1 248 aa10.84□□□□□ -0.67
SHMT2-208ENST00000553868 KLF12Q9Y4X4 402 aa10.84□□□□□ -0.67
SHMT2-208ENST00000553868 LY96Q9Y6Y9 160 aa10.84□□□□□ -0.67
SHMT2-208ENST00000553868 TRAV8-2A0A0B4J237 113 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 TRBV6-1A0A0K0K1D8 114 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 RBAKDNA6NC62 111 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 M0R036 132 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 M0R3E3 92 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 TSPAN4O14817 238 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 GUCA2BQ16661 112 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 DEFB114Q30KQ6 69 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 GBGT1Q8N5D6 347 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 LINC00482Q8N8I6 264 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 TMEM75Q8N9X5 138 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 ZNF738Q8NE65 137 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 OR2K2Q8NGT1 345 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 SMIM12Q96EX1 92 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 PRR25Q96S07 402 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 DERL1Q9BUN8 251 aa10.83□□□□□ -0.68
SHMT2-208ENST00000553868 B4DEV8 164 aa10.82□□□□□ -0.68
SHMT2-208ENST00000553868 K7EQG2 157 aa10.82□□□□□ -0.68
SHMT2-208ENST00000553868 SAP30O75446 220 aa10.82□□□□□ -0.68
SHMT2-208ENST00000553868 CENPWQ5EE01 88 aa10.82□□□□□ -0.68
SHMT2-208ENST00000553868 WFDC3Q8IUB2 231 aa10.82□□□□□ -0.68
SHMT2-208ENST00000553868 CLRN3Q8NCR9 226 aa10.82□□□□□ -0.68
SHMT2-208ENST00000553868 DCANP1Q8TF63 244 aa10.82□□□□□ -0.68
SHMT2-208ENST00000553868 SPAG8Q99932 426 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-208ENST00000553868 SDF2L1Q9HCN8 221 aa10.82□□□□□ -0.68
SHMT2-208ENST00000553868 BIN3Q9NQY0 253 aa10.82□□□□□ -0.68
SHMT2-208ENST00000553868 OR4C46A6NHA9 309 aa10.81□□□□□ -0.68
SHMT2-208ENST00000553868 HLA-DMBP28068 263 aa10.81□□□□□ -0.68
SHMT2-208ENST00000553868 TFPI2P48307 235 aa10.81□□□□□ -0.68
SHMT2-208ENST00000553868 RHEBQ15382 184 aa10.81□□□□□ -0.68
SHMT2-208ENST00000553868 ADIRFQ15847 76 aa10.81□□□□□ -0.68
SHMT2-208ENST00000553868 IGFL4Q6B9Z1 124 aa10.81□□□□□ -0.68
SHMT2-208ENST00000553868 BAGE2Q86Y30 109 aa10.81□□□□□ -0.68
SHMT2-208ENST00000553868 TMEM61Q8N0U2 210 aa10.81□□□□□ -0.68
SHMT2-208ENST00000553868 RNF182Q8N6D2 247 aa10.81□□□□□ -0.68
SHMT2-208ENST00000553868 ZFP30Q9Y2G7 519 aa10.81□□□□□ -0.68
SHMT2-208ENST00000553868 TRAV34A0A0B4J273 112 aa10.8□□□□□ -0.68
SHMT2-208ENST00000553868 INSL3P51460 131 aa10.8□□□□□ -0.68
SHMT2-208ENST00000553868 FLI1Q01543 452 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-208ENST00000553868 CD300EQ496F6 205 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-208ENST00000553868 Q86TA4 180 aa10.8□□□□□ -0.68
SHMT2-208ENST00000553868 OR10J6PQ8NGY7 276 aa10.8□□□□□ -0.68
SHMT2-208ENST00000553868 LINC00479Q96M42 142 aa10.8□□□□□ -0.68
SHMT2-208ENST00000553868 NDFIP1Q9BT67 221 aa10.8□□□□□ -0.68
SHMT2-208ENST00000553868 MCRIP2Q9BUT9 160 aaKnown RBP10.8□□□□□ -0.68
SHMT2-208ENST00000553868 PSG8Q9UQ74 426 aa10.8□□□□□ -0.68
SHMT2-208ENST00000553868 IGKV2-40A0A087WW87 121 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-208ENST00000553868 ZNF705FA8MVS1 300 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-208ENST00000553868 IGKV2D-40P01614 121 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-208ENST00000553868 CMC4P56277 68 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-208ENST00000553868 RPL23P62829 140 aaKnown RBP10.79□□□□□ -0.68
SHMT2-208ENST00000553868 SAPCD1Q5SSQ6 148 aa10.79□□□□□ -0.68
SHMT2-208ENST00000553868 LINC01551Q86U37 167 aa10.79□□□□□ -0.68
SHMT2-208ENST00000553868 SBSPONQ8IVN8 264 aa10.79□□□□□ -0.68
SHMT2-208ENST00000553868 IGF2BP2-AS1Q96M15 143 aa10.79□□□□□ -0.68
SHMT2-208ENST00000553868 SELENOKQ9Y6D0 94 aa10.79□□□□□ -0.68
SHMT2-208ENST00000553868 TRBV20OR9-2A0A075B6H5 130 aa10.78□□□□□ -0.68
SHMT2-208ENST00000553868 LTAP01374 205 aa10.78□□□□□ -0.68
SHMT2-208ENST00000553868 MT-ND4LP03901 98 aa10.78□□□□□ -0.68
SHMT2-208ENST00000553868 ZNF688P0C7X2 276 aa10.78□□□□□ -0.68
SHMT2-208ENST00000553868 TMEM78Q5T7P6 136 aa10.78□□□□□ -0.68
SHMT2-208ENST00000553868 C9orf66Q5T8R8 295 aa10.78□□□□□ -0.68
SHMT2-208ENST00000553868 PRNTQ86SH4 94 aa10.78□□□□□ -0.68
SHMT2-208ENST00000553868 C20orf173Q96LM9 149 aa10.78□□□□□ -0.68
SHMT2-208ENST00000553868 GPR61Q9BZJ8 451 aa10.78□□□□□ -0.68
SHMT2-208ENST00000553868 IGLV1-51P01701 117 aa10.77□□□□□ -0.69
SHMT2-208ENST00000553868 IGLV2-11P01706 119 aa10.77□□□□□ -0.69
SHMT2-208ENST00000553868 MGST1P10620 155 aaKnown RBP10.77□□□□□ -0.69
SHMT2-208ENST00000553868 PSMG4Q5JS54 123 aa10.77□□□□□ -0.69
SHMT2-208ENST00000553868 EBLN2Q6P2I7 272 aa10.77□□□□□ -0.69
SHMT2-208ENST00000553868 C9orf47Q6ZRZ4 202 aa10.77□□□□□ -0.69
SHMT2-208ENST00000553868 TMEM183AQ8IXX5 376 aa10.77□□□□□ -0.69
SHMT2-208ENST00000553868 OCC1Q8TAD7 63 aa10.77□□□□□ -0.69
SHMT2-208ENST00000553868 LINC00477Q96M19 166 aa10.77□□□□□ -0.69
SHMT2-208ENST00000553868 LENEPQ9Y5L5 61 aa10.77□□□□□ -0.69
SHMT2-208ENST00000553868 A0A087WWC5 75 aa10.76□□□□□ -0.69
SHMT2-208ENST00000553868 TRAV8-1A0A0A6YYK1 113 aa10.76□□□□□ -0.69
SHMT2-208ENST00000553868 C7orf77A4D0Y5 90 aa10.76□□□□□ -0.69
SHMT2-208ENST00000553868 PRAC2D3DTV9 90 aa10.76□□□□□ -0.69
SHMT2-208ENST00000553868 NPIPB6E9PJ23 425 aa10.76□□□□□ -0.69
SHMT2-208ENST00000553868 PPP1R2P9O14990 202 aa10.76□□□□□ -0.69
SHMT2-208ENST00000553868 ZNF138P52744 262 aa10.76□□□□□ -0.69
SHMT2-208ENST00000553868 OR8A1Q8NGG7 326 aa10.76□□□□□ -0.69
SHMT2-208ENST00000553868 ISOC2Q96AB3 205 aa10.76□□□□□ -0.69
SHMT2-208ENST00000553868 SGK494Q96LW2 274 aa10.76□□□□□ -0.69
SHMT2-208ENST00000553868 CTDSP1Q9GZU7 261 aa10.76□□□□□ -0.69
SHMT2-208ENST00000553868 RPS10P5Q9NQ39 176 aa10.76□□□□□ -0.69
SHMT2-208ENST00000553868 PPP1R14DQ9NXH3 145 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms