RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 FAM167A-AS1Q96KT0 104 aa12.46□□□□□ -0.41
FOXN3-204ENST00000553840 PAXXQ9BUH6 204 aa12.46□□□□□ -0.41
FOXN3-204ENST00000553840 HSPB11Q9Y547 144 aa12.46□□□□□ -0.41
FOXN3-204ENST00000553840 VPS13DQ5THJ4 4388 aa12.46□□□□□ -0.42
FOXN3-204ENST00000553840 NACAE9PAV3 2078 aa12.46□□□□□ -0.42
FOXN3-204ENST00000553840 OR7C2O60412 319 aa12.45□□□□□ -0.42
FOXN3-204ENST00000553840 GPX1P07203 203 aa12.45□□□□□ -0.42
FOXN3-204ENST00000553840 GIPP09681 153 aaPredicted RBP12.45□□□□□ -0.42
FOXN3-204ENST00000553840 RPL12P30050 165 aaKnown RBP12.45□□□□□ -0.42
FOXN3-204ENST00000553840 CCL18P55774 89 aa12.45□□□□□ -0.42
FOXN3-204ENST00000553840 ERCC8Q13216 396 aa12.45□□□□□ -0.42
FOXN3-204ENST00000553840 FAM122CQ6P4D5 195 aa12.45□□□□□ -0.42
FOXN3-204ENST00000553840 C9orf47Q6ZRZ4 202 aa12.45□□□□□ -0.42
FOXN3-204ENST00000553840 AGPAT4-IT1Q9H0P7 198 aa12.45□□□□□ -0.42
FOXN3-204ENST00000553840 NMBP08949 121 aa12.44□□□□□ -0.42
FOXN3-204ENST00000553840 OR10J4P0C629 311 aa12.44□□□□□ -0.42
FOXN3-204ENST00000553840 CSN1S1P47710 185 aa12.44□□□□□ -0.42
FOXN3-204ENST00000553840 OR5I1Q13606 314 aa12.44□□□□□ -0.42
FOXN3-204ENST00000553840 ZNF680Q8NEM1 530 aa12.44□□□□□ -0.42
FOXN3-204ENST00000553840 RNF141Q8WVD5 230 aa12.44□□□□□ -0.42
FOXN3-204ENST00000553840 ASB13Q8WXK3 278 aa12.44□□□□□ -0.42
FOXN3-204ENST00000553840 GAGE12BA1L429 117 aa12.43□□□□□ -0.42
FOXN3-204ENST00000553840 PRSS29PA6NIE9 313 aa12.43□□□□□ -0.42
FOXN3-204ENST00000553840 KLLNB2CW77 178 aa12.43□□□□□ -0.42
FOXN3-204ENST00000553840 GAGE7O76087 117 aa12.43□□□□□ -0.42
FOXN3-204ENST00000553840 GAGE12FP0CL80 117 aa12.43□□□□□ -0.42
FOXN3-204ENST00000553840 GAGE12GP0CL81 117 aa12.43□□□□□ -0.42
FOXN3-204ENST00000553840 GAGE12IP0CL82 117 aa12.43□□□□□ -0.42
FOXN3-204ENST00000553840 RNASE4P34096 147 aaKnown RBP12.43□□□□□ -0.42
FOXN3-204ENST00000553840 TAS2R45P59539 299 aa12.43□□□□□ -0.42
FOXN3-204ENST00000553840 FFAR4Q5NUL3 377 aa12.43□□□□□ -0.42
FOXN3-204ENST00000553840 LINC00612Q8N6U2 182 aa12.43□□□□□ -0.42
FOXN3-204ENST00000553840 FXYD5Q96DB9 178 aa12.43□□□□□ -0.42
FOXN3-204ENST00000553840 SMIM3Q9BZL3 60 aa12.43□□□□□ -0.42
FOXN3-204ENST00000553840 CRISP2P16562 243 aa12.42□□□□□ -0.42
FOXN3-204ENST00000553840 DAZ2Q13117 558 aaKnown RBP12.42□□□□□ -0.42
FOXN3-204ENST00000553840 KHDC3LQ587J8 217 aa12.42□□□□□ -0.42
FOXN3-204ENST00000553840 Q5BKY6 102 aa12.42□□□□□ -0.42
FOXN3-204ENST00000553840 Q6ZR54 194 aa12.42□□□□□ -0.42
FOXN3-204ENST00000553840 LYPD1Q8N2G4 141 aa12.42□□□□□ -0.42
FOXN3-204ENST00000553840 EIF4E3Q8N5X7 224 aaKnown RBP12.42□□□□□ -0.42
FOXN3-204ENST00000553840 OR2T35Q8NGX2 323 aa12.42□□□□□ -0.42
FOXN3-204ENST00000553840 GNPNAT1Q96EK6 184 aaPredicted RBP12.42□□□□□ -0.42
FOXN3-204ENST00000553840 FAM19A4Q96LR4 140 aa12.42□□□□□ -0.42
FOXN3-204ENST00000553840 LINC00467Q9BRT7 94 aa12.42□□□□□ -0.42
FOXN3-204ENST00000553840 DNAH6Q9C0G6 4158 aa12.42□□□□□ -0.42
FOXN3-204ENST00000553840 IGKV2-40A0A087WW87 121 aaPredicted RBP12.41□□□□□ -0.42
FOXN3-204ENST00000553840 IGKV2D-40P01614 121 aaPredicted RBP12.41□□□□□ -0.42
FOXN3-204ENST00000553840 M6PRP20645 277 aa12.41□□□□□ -0.42
FOXN3-204ENST00000553840 RANP62826 216 aaKnown RBP12.41□□□□□ -0.42
FOXN3-204ENST00000553840 CD300CQ08708 224 aa12.41□□□□□ -0.42
FOXN3-204ENST00000553840 BTN1A1Q13410 526 aa12.41□□□□□ -0.42
FOXN3-204ENST00000553840 ZNF492Q9P255 531 aa12.41□□□□□ -0.42
FOXN3-204ENST00000553840 RGS13O14921 159 aa12.4□□□□□ -0.42
FOXN3-204ENST00000553840 RTL8CO15255 209 aa12.4□□□□□ -0.42
FOXN3-204ENST00000553840 ZNF324O75467 553 aaPredicted RBP12.4□□□□□ -0.42
FOXN3-204ENST00000553840 ZNF138P52744 262 aa12.4□□□□□ -0.42
FOXN3-204ENST00000553840 UBE2L3P68036 154 aaKnown RBP12.4□□□□□ -0.42
FOXN3-204ENST00000553840 ANXA2RQ3ZCQ2 193 aa12.4□□□□□ -0.42
FOXN3-204ENST00000553840 C1orf134Q5TEV5 83 aa12.4□□□□□ -0.42
FOXN3-204ENST00000553840 PHYHIPLQ96FC7 376 aa12.4□□□□□ -0.42
FOXN3-204ENST00000553840 VGLL1Q99990 258 aa12.4□□□□□ -0.42
FOXN3-204ENST00000553840 TRGV2A0A075B6R0 118 aa12.39□□□□□ -0.43
FOXN3-204ENST00000553840 TRAV26-1A0A087WT03 109 aa12.39□□□□□ -0.43
FOXN3-204ENST00000553840 FXYD6-FXYD2A0A087WZ82 144 aa12.39□□□□□ -0.43
FOXN3-204ENST00000553840 TRBV7-9A0A0J9YWB2 115 aa12.39□□□□□ -0.43
FOXN3-204ENST00000553840 RBAKDNA6NC62 111 aa12.39□□□□□ -0.43
FOXN3-204ENST00000553840 ACOT6Q3I5F7 207 aaPredicted RBP12.39□□□□□ -0.43
FOXN3-204ENST00000553840 RXFP4Q8TDU9 374 aa12.39□□□□□ -0.43
FOXN3-204ENST00000553840 ZNF503Q96F45 646 aa12.39□□□□□ -0.43
FOXN3-204ENST00000553840 Q9H3A6 140 aa12.39□□□□□ -0.43
FOXN3-204ENST00000553840 GSN-AS1Q9NRJ2 163 aa12.39□□□□□ -0.43
FOXN3-204ENST00000553840 A0A1W2PPV4 95 aa12.38□□□□□ -0.43
FOXN3-204ENST00000553840 FAM74A1Q5RGS3 127 aa12.38□□□□□ -0.43
FOXN3-204ENST00000553840 Q6ZTI0 123 aa12.38□□□□□ -0.43
FOXN3-204ENST00000553840 ARPC5LQ9BPX5 153 aa12.38□□□□□ -0.43
FOXN3-204ENST00000553840 H3BNG1 76 aa12.37□□□□□ -0.43
FOXN3-204ENST00000553840 IBA57Q5T440 356 aaKnown RBP12.37□□□□□ -0.43
FOXN3-204ENST00000553840 ZFAND2AQ8N6M9 145 aa12.37□□□□□ -0.43
FOXN3-204ENST00000553840 C11orf72Q8NBR9 251 aa12.37□□□□□ -0.43
FOXN3-204ENST00000553840 INO80EQ8NBZ0 244 aaPredicted RBP12.37□□□□□ -0.43
FOXN3-204ENST00000553840 WFDC1Q9HC57 220 aa12.37□□□□□ -0.43
FOXN3-204ENST00000553840 IGHV1OR15-1A0A075B7D0 117 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 TRGV1A0A0A0MS02 117 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 A0A0J9YY99 117 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 A0A1B0GVY2 172 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 SMLR1H3BR10 107 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 HOXA5P20719 270 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 TCL1AP56279 114 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 Q6ZNX1 250 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 PQLC2Q6ZP29 291 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 SSX7Q7RTT5 188 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 ZNRF2Q8NHG8 242 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 CMTM2Q8TAZ6 248 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 C18orf15Q96N68 181 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 AQP10Q96PS8 301 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 TMPRSS5Q9H3S3 457 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 LINC00588Q9Y4M8 146 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 DNAH10Q8IVF4 4471 aa12.36□□□□□ -0.43
FOXN3-204ENST00000553840 NBDYA0A0U1RRE5 68 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms