RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 NACAE9PAV3 2078 aa10.67□□□□□ -0.7
PRPF40B-209ENST00000548825 C19orf84I3L1E1 186 aa10.67□□□□□ -0.7
PRPF40B-209ENST00000548825 DLEU1O43261 78 aa10.67□□□□□ -0.7
PRPF40B-209ENST00000548825 EGR2P11161 476 aaPredicted RBP10.67□□□□□ -0.7
PRPF40B-209ENST00000548825 HOXB4P17483 251 aaPredicted RBP10.67□□□□□ -0.7
PRPF40B-209ENST00000548825 TRAV40A0A0B4J280 105 aa10.67□□□□□ -0.7
PRPF40B-209ENST00000548825 CTSGP08311 255 aa10.67□□□□□ -0.7
PRPF40B-209ENST00000548825 MAPK1IP1LQ8NDC0 245 aa10.67□□□□□ -0.7
PRPF40B-209ENST00000548825 KLK15Q9H2R5 256 aa10.67□□□□□ -0.7
PRPF40B-209ENST00000548825 ACANP16112 2415 aa10.67□□□□□ -0.7
PRPF40B-209ENST00000548825 NMUP48645 174 aa10.66□□□□□ -0.7
PRPF40B-209ENST00000548825 NRGNQ92686 78 aa10.66□□□□□ -0.7
PRPF40B-209ENST00000548825 GAS8-AS1O95177 125 aa10.66□□□□□ -0.7
PRPF40B-209ENST00000548825 RNF151Q2KHN1 245 aa10.66□□□□□ -0.7
PRPF40B-209ENST00000548825 IGSF10Q6WRI0 2623 aa10.66□□□□□ -0.7
PRPF40B-209ENST00000548825 IGLV11-55A0A075B6I3 123 aa10.66□□□□□ -0.7
PRPF40B-209ENST00000548825 FAM162BQ5T6X4 162 aa10.66□□□□□ -0.7
PRPF40B-209ENST00000548825 IL17RELQ6ZVW7 336 aa10.66□□□□□ -0.7
PRPF40B-209ENST00000548825 OR11H6Q8NGC7 330 aa10.66□□□□□ -0.7
PRPF40B-209ENST00000548825 WIPF2Q8TF74 440 aaPredicted RBP10.66□□□□□ -0.7
PRPF40B-209ENST00000548825 CACNG7P62955 275 aa10.65□□□□□ -0.7
PRPF40B-209ENST00000548825 FER1L6-AS1Q8NA97 138 aa10.65□□□□□ -0.7
PRPF40B-209ENST00000548825 NDFIP1Q9BT67 221 aa10.65□□□□□ -0.7
PRPF40B-209ENST00000548825 ZFP30Q9Y2G7 519 aa10.65□□□□□ -0.7
PRPF40B-209ENST00000548825 TRAV26-2A0A0B4J265 109 aa10.65□□□□□ -0.7
PRPF40B-209ENST00000548825 CTRLP40313 264 aa10.65□□□□□ -0.7
PRPF40B-209ENST00000548825 NEU4Q8WWR8 484 aaPredicted RBP10.65□□□□□ -0.7
PRPF40B-209ENST00000548825 PLP1P60201 277 aa10.64□□□□□ -0.71
PRPF40B-209ENST00000548825 PRSS57Q6UWY2 283 aa10.64□□□□□ -0.71
PRPF40B-209ENST00000548825 JMJD1CQ15652 2540 aa10.64□□□□□ -0.71
PRPF40B-209ENST00000548825 SCGB2A1O75556 95 aa10.64□□□□□ -0.71
PRPF40B-209ENST00000548825 RASL11AQ6T310 242 aa10.64□□□□□ -0.71
PRPF40B-209ENST00000548825 DOPEY1Q5JWR5 2465 aa10.64□□□□□ -0.71
PRPF40B-209ENST00000548825 TRAV30A0A087WSZ9 112 aa10.64□□□□□ -0.71
PRPF40B-209ENST00000548825 SLC25A34Q6PIV7 304 aa10.64□□□□□ -0.71
PRPF40B-209ENST00000548825 PIP4P2Q8N4L2 257 aa10.64□□□□□ -0.71
PRPF40B-209ENST00000548825 Q8N9W7 124 aa10.64□□□□□ -0.71
PRPF40B-209ENST00000548825 ZNF492Q9P255 531 aa10.64□□□□□ -0.71
PRPF40B-209ENST00000548825 GOSR1O95249 250 aa10.63□□□□□ -0.71
PRPF40B-209ENST00000548825 PF4V1P10720 104 aa10.63□□□□□ -0.71
PRPF40B-209ENST00000548825 LY6G5BQ8NDX9 201 aa10.63□□□□□ -0.71
PRPF40B-209ENST00000548825 PRR25Q96S07 402 aa10.63□□□□□ -0.71
PRPF40B-209ENST00000548825 TMEM14CQ9P0S9 112 aa10.63□□□□□ -0.71
PRPF40B-209ENST00000548825 HSPB8Q9UJY1 196 aa10.63□□□□□ -0.71
PRPF40B-209ENST00000548825 F8W735 103 aaPredicted RBP10.63□□□□□ -0.71
PRPF40B-209ENST00000548825 IGKV3-20P01619 116 aa10.63□□□□□ -0.71
PRPF40B-209ENST00000548825 PRSS1P07477 247 aa10.63□□□□□ -0.71
PRPF40B-209ENST00000548825 S100A7AQ86SG5 101 aa10.63□□□□□ -0.71
PRPF40B-209ENST00000548825 OR10AG1Q8NH19 301 aa10.63□□□□□ -0.71
PRPF40B-209ENST00000548825 RAB37Q96AX2 223 aa10.63□□□□□ -0.71
PRPF40B-209ENST00000548825 C16orf92Q96LL3 132 aa10.63□□□□□ -0.71
PRPF40B-209ENST00000548825 NPYP01303 97 aa10.63□□□□□ -0.71
PRPF40B-209ENST00000548825 TRGV3P03979 118 aa10.63□□□□□ -0.71
PRPF40B-209ENST00000548825 M0R1W7 72 aa10.62□□□□□ -0.71
PRPF40B-209ENST00000548825 KLF5Q13887 457 aaPredicted RBP10.62□□□□□ -0.71
PRPF40B-209ENST00000548825 SIGLEC8Q9NYZ4 499 aa10.62□□□□□ -0.71
PRPF40B-209ENST00000548825 ORMDL3Q8N138 153 aa10.62□□□□□ -0.71
PRPF40B-209ENST00000548825 RNF5Q99942 180 aa10.62□□□□□ -0.71
PRPF40B-209ENST00000548825 TTTY13Q9BZ97 58 aa10.62□□□□□ -0.71
PRPF40B-209ENST00000548825 M0R381 172 aa10.61□□□□□ -0.71
PRPF40B-209ENST00000548825 PSG9Q00887 426 aa10.61□□□□□ -0.71
PRPF40B-209ENST00000548825 FOXE3Q13461 319 aa10.61□□□□□ -0.71
PRPF40B-209ENST00000548825 MRPL51Q4U2R6 128 aaKnown RBP10.61□□□□□ -0.71
PRPF40B-209ENST00000548825 SMAD5-AS1Q9Y6J3 95 aa10.61□□□□□ -0.71
PRPF40B-209ENST00000548825 HAX1O00165 279 aa10.61□□□□□ -0.71
PRPF40B-209ENST00000548825 NDUFA3O95167 84 aa10.61□□□□□ -0.71
PRPF40B-209ENST00000548825 TRBV12-3P01733 135 aa10.61□□□□□ -0.71
PRPF40B-209ENST00000548825 ZNF738Q8NE65 137 aa10.61□□□□□ -0.71
PRPF40B-209ENST00000548825 F6UB75 175 aa10.61□□□□□ -0.71
PRPF40B-209ENST00000548825 UCNP55089 124 aa10.61□□□□□ -0.71
PRPF40B-209ENST00000548825 OR4C5Q8NGB2 326 aa10.61□□□□□ -0.71
PRPF40B-209ENST00000548825 WI2-2373I1.2A0A1W2PRP0 233 aa10.6□□□□□ -0.71
PRPF40B-209ENST00000548825 IGF1P05019 195 aa10.6□□□□□ -0.71
PRPF40B-209ENST00000548825 S100A4P26447 101 aaKnown RBP10.6□□□□□ -0.71
PRPF40B-209ENST00000548825 TMEM78Q5T7P6 136 aa10.6□□□□□ -0.71
PRPF40B-209ENST00000548825 SPANXN1Q5VSR9 72 aa10.6□□□□□ -0.71
PRPF40B-209ENST00000548825 NPBQ8NG41 125 aa10.6□□□□□ -0.71
PRPF40B-209ENST00000548825 K7EMI3 77 aa10.6□□□□□ -0.71
PRPF40B-209ENST00000548825 CHCHD1Q96BP2 118 aaKnown RBP10.6□□□□□ -0.71
PRPF40B-209ENST00000548825 ODF3BA8MYP8 253 aa10.6□□□□□ -0.71
PRPF40B-209ENST00000548825 TMEM95Q3KNT9 176 aa10.6□□□□□ -0.71
PRPF40B-209ENST00000548825 CT83Q5H943 113 aa10.6□□□□□ -0.71
PRPF40B-209ENST00000548825 METTL26Q96S19 204 aa10.6□□□□□ -0.71
PRPF40B-209ENST00000548825 C7orf71A4D174 169 aa10.59□□□□□ -0.71
PRPF40B-209ENST00000548825 NPFFO15130 113 aa10.59□□□□□ -0.71
PRPF40B-209ENST00000548825 GFRA4Q9GZZ7 299 aa10.59□□□□□ -0.71
PRPF40B-209ENST00000548825 H3BVH4 76 aa10.59□□□□□ -0.71
PRPF40B-209ENST00000548825 EFNA4P52798 201 aa10.59□□□□□ -0.71
PRPF40B-209ENST00000548825 ATP5J2P56134 94 aa10.59□□□□□ -0.71
PRPF40B-209ENST00000548825 SAPCD1Q5SSQ6 148 aa10.59□□□□□ -0.71
PRPF40B-209ENST00000548825 C11orf71Q6IPW1 123 aa10.59□□□□□ -0.71
PRPF40B-209ENST00000548825 TTC9CQ8N5M4 171 aa10.59□□□□□ -0.71
PRPF40B-209ENST00000548825 IGHV2-70DA0A0C4DH43 119 aa10.58□□□□□ -0.72
PRPF40B-209ENST00000548825 A1L4Q6 167 aa10.58□□□□□ -0.72
PRPF40B-209ENST00000548825 HTN1P15515 57 aa10.58□□□□□ -0.72
PRPF40B-209ENST00000548825 BMI1P35226 326 aa10.58□□□□□ -0.72
PRPF40B-209ENST00000548825 ATP5G2Q06055 141 aa10.58□□□□□ -0.72
PRPF40B-209ENST00000548825 FAM104BQ5XKR9 115 aa10.58□□□□□ -0.72
PRPF40B-209ENST00000548825 DUX5Q96PT3 197 aa10.58□□□□□ -0.72
PRPF40B-209ENST00000548825 FABP5P3A8MUU1 101 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms