RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 C7orf71A4D174 169 aa13.08□□□□□ -0.32
CHMP1A-203ENST00000547614 CRISP2P16562 243 aa13.08□□□□□ -0.32
CHMP1A-203ENST00000547614 RPL12P30050 165 aaKnown RBP13.08□□□□□ -0.32
CHMP1A-203ENST00000547614 RNF141Q8WVD5 230 aa13.08□□□□□ -0.32
CHMP1A-203ENST00000547614 FXYD5Q96DB9 178 aa13.08□□□□□ -0.32
CHMP1A-203ENST00000547614 PAXXQ9BUH6 204 aa13.08□□□□□ -0.32
CHMP1A-203ENST00000547614 IGLV2-18A0A075B6J9 118 aa13.07□□□□□ -0.32
CHMP1A-203ENST00000547614 RTL8CO15255 209 aa13.07□□□□□ -0.32
CHMP1A-203ENST00000547614 ZNF324O75467 553 aaPredicted RBP13.07□□□□□ -0.32
CHMP1A-203ENST00000547614 IFNA5P01569 189 aa13.07□□□□□ -0.32
CHMP1A-203ENST00000547614 DAZ2Q13117 558 aaKnown RBP13.07□□□□□ -0.32
CHMP1A-203ENST00000547614 LINC00467Q9BRT7 94 aa13.07□□□□□ -0.32
CHMP1A-203ENST00000547614 ATG101Q9BSB4 218 aa13.07□□□□□ -0.32
CHMP1A-203ENST00000547614 NACAE9PAV3 2078 aa13.07□□□□□ -0.32
CHMP1A-203ENST00000547614 TMEM78Q5T7P6 136 aa13.06□□□□□ -0.32
CHMP1A-203ENST00000547614 FAM122CQ6P4D5 195 aa13.06□□□□□ -0.32
CHMP1A-203ENST00000547614 LYPD1Q8N2G4 141 aa13.06□□□□□ -0.32
CHMP1A-203ENST00000547614 SCGB1C1Q8TD33 95 aa13.06□□□□□ -0.32
CHMP1A-203ENST00000547614 OR7C2O60412 319 aa13.05□□□□□ -0.32
CHMP1A-203ENST00000547614 NUDT3O95989 172 aa13.05□□□□□ -0.32
CHMP1A-203ENST00000547614 GPX1P07203 203 aa13.05□□□□□ -0.32
CHMP1A-203ENST00000547614 OR10J4P0C629 311 aa13.05□□□□□ -0.32
CHMP1A-203ENST00000547614 FFAR4Q5NUL3 377 aa13.05□□□□□ -0.32
CHMP1A-203ENST00000547614 ZNF680Q8NEM1 530 aa13.05□□□□□ -0.32
CHMP1A-203ENST00000547614 MBD2Q9UBB5 411 aa13.05□□□□□ -0.32
CHMP1A-203ENST00000547614 IGKV2-40A0A087WW87 121 aaPredicted RBP13.04□□□□□ -0.32
CHMP1A-203ENST00000547614 TRBV7-9A0A0J9YWB2 115 aa13.04□□□□□ -0.32
CHMP1A-203ENST00000547614 A0A1B0GVY2 172 aa13.04□□□□□ -0.32
CHMP1A-203ENST00000547614 PRSS29PA6NIE9 313 aa13.04□□□□□ -0.32
CHMP1A-203ENST00000547614 IGKV2D-40P01614 121 aaPredicted RBP13.04□□□□□ -0.32
CHMP1A-203ENST00000547614 CCL18P55774 89 aa13.04□□□□□ -0.32
CHMP1A-203ENST00000547614 CD300CQ08708 224 aa13.04□□□□□ -0.32
CHMP1A-203ENST00000547614 ANXA2RQ3ZCQ2 193 aa13.04□□□□□ -0.32
CHMP1A-203ENST00000547614 SOHLH1Q5JUK2 328 aa13.04□□□□□ -0.32
CHMP1A-203ENST00000547614 EIF4E3Q8N5X7 224 aaKnown RBP13.04□□□□□ -0.32
CHMP1A-203ENST00000547614 ZFAND2AQ8N6M9 145 aa13.04□□□□□ -0.32
CHMP1A-203ENST00000547614 ZNF503Q96F45 646 aa13.04□□□□□ -0.32
CHMP1A-203ENST00000547614 VGLL1Q99990 258 aa13.04□□□□□ -0.32
CHMP1A-203ENST00000547614 ZNF492Q9P255 531 aa13.04□□□□□ -0.32
CHMP1A-203ENST00000547614 GAGE12BA1L429 117 aa13.03□□□□□ -0.32
CHMP1A-203ENST00000547614 GAGE7O76087 117 aa13.03□□□□□ -0.32
CHMP1A-203ENST00000547614 GAGE12FP0CL80 117 aa13.03□□□□□ -0.32
CHMP1A-203ENST00000547614 GAGE12GP0CL81 117 aa13.03□□□□□ -0.32
CHMP1A-203ENST00000547614 GAGE12IP0CL82 117 aa13.03□□□□□ -0.32
CHMP1A-203ENST00000547614 M6PRP20645 277 aa13.03□□□□□ -0.32
CHMP1A-203ENST00000547614 RNASE4P34096 147 aaKnown RBP13.03□□□□□ -0.32
CHMP1A-203ENST00000547614 TAS2R45P59539 299 aa13.03□□□□□ -0.32
CHMP1A-203ENST00000547614 BTN1A1Q13410 526 aa13.03□□□□□ -0.32
CHMP1A-203ENST00000547614 OR5I1Q13606 314 aa13.03□□□□□ -0.32
CHMP1A-203ENST00000547614 PHYHIPLQ96FC7 376 aa13.03□□□□□ -0.32
CHMP1A-203ENST00000547614 SMIM3Q9BZL3 60 aa13.03□□□□□ -0.32
CHMP1A-203ENST00000547614 HECTD4Q9Y4D8 3996 aa13.02□□□□□ -0.32
CHMP1A-203ENST00000547614 RBAKDNA6NC62 111 aa13.02□□□□□ -0.33
CHMP1A-203ENST00000547614 H3BNG1 76 aa13.02□□□□□ -0.33
CHMP1A-203ENST00000547614 CSN1S1P47710 185 aa13.02□□□□□ -0.33
CHMP1A-203ENST00000547614 ZNF138P52744 262 aa13.02□□□□□ -0.33
CHMP1A-203ENST00000547614 RANP62826 216 aaKnown RBP13.02□□□□□ -0.33
CHMP1A-203ENST00000547614 KHDC3LQ587J8 217 aa13.02□□□□□ -0.33
CHMP1A-203ENST00000547614 C11orf72Q8NBR9 251 aa13.02□□□□□ -0.33
CHMP1A-203ENST00000547614 GNPNAT1Q96EK6 184 aaPredicted RBP13.02□□□□□ -0.33
CHMP1A-203ENST00000547614 C18orf15Q96N68 181 aa13.02□□□□□ -0.33
CHMP1A-203ENST00000547614 GSN-AS1Q9NRJ2 163 aa13.02□□□□□ -0.33
CHMP1A-203ENST00000547614 TRAV26-1A0A087WT03 109 aa13.01□□□□□ -0.33
CHMP1A-203ENST00000547614 UBE2L3P68036 154 aaKnown RBP13.01□□□□□ -0.33
CHMP1A-203ENST00000547614 Q6ZTI0 123 aa13.01□□□□□ -0.33
CHMP1A-203ENST00000547614 ZNRF2Q8NHG8 242 aa13.01□□□□□ -0.33
CHMP1A-203ENST00000547614 RXFP4Q8TDU9 374 aa13.01□□□□□ -0.33
CHMP1A-203ENST00000547614 WFDC1Q9HC57 220 aa13.01□□□□□ -0.33
CHMP1A-203ENST00000547614 ALG5Q9Y673 324 aa13.01□□□□□ -0.33
CHMP1A-203ENST00000547614 PTTG1O95997 202 aa13□□□□□ -0.33
CHMP1A-203ENST00000547614 HOXA5P20719 270 aa13□□□□□ -0.33
CHMP1A-203ENST00000547614 IBA57Q5T440 356 aaKnown RBP13□□□□□ -0.33
CHMP1A-203ENST00000547614 C1orf134Q5TEV5 83 aa13□□□□□ -0.33
CHMP1A-203ENST00000547614 Q9H3A6 140 aa13□□□□□ -0.33
CHMP1A-203ENST00000547614 LINC00588Q9Y4M8 146 aa13□□□□□ -0.33
CHMP1A-203ENST00000547614 DNAH2Q9P225 4427 aa12.99□□□□□ -0.33
CHMP1A-203ENST00000547614 RGS13O14921 159 aa12.99□□□□□ -0.33
CHMP1A-203ENST00000547614 TCL1AP56279 114 aa12.99□□□□□ -0.33
CHMP1A-203ENST00000547614 ACOT6Q3I5F7 207 aaPredicted RBP12.99□□□□□ -0.33
CHMP1A-203ENST00000547614 LENEPQ9Y5L5 61 aa12.99□□□□□ -0.33
CHMP1A-203ENST00000547614 TRGV2A0A075B6R0 118 aa12.98□□□□□ -0.33
CHMP1A-203ENST00000547614 IGHV1OR15-1A0A075B7D0 117 aa12.98□□□□□ -0.33
CHMP1A-203ENST00000547614 NBDYA0A0U1RRE5 68 aa12.98□□□□□ -0.33
CHMP1A-203ENST00000547614 PRR9Q5T870 116 aa12.98□□□□□ -0.33
CHMP1A-203ENST00000547614 PQLC2Q6ZP29 291 aa12.98□□□□□ -0.33
CHMP1A-203ENST00000547614 SSX7Q7RTT5 188 aa12.98□□□□□ -0.33
CHMP1A-203ENST00000547614 TMPRSS5Q9H3S3 457 aa12.98□□□□□ -0.33
CHMP1A-203ENST00000547614 FAT2Q9NYQ8 4349 aa12.98□□□□□ -0.33
CHMP1A-203ENST00000547614 A0A1W2PPV4 95 aa12.97□□□□□ -0.33
CHMP1A-203ENST00000547614 DIRC3C9JPN6 131 aa12.97□□□□□ -0.33
CHMP1A-203ENST00000547614 SPINK4O60575 86 aa12.97□□□□□ -0.33
CHMP1A-203ENST00000547614 ZNF266Q14584 549 aa12.97□□□□□ -0.33
CHMP1A-203ENST00000547614 ARL6IP6Q8N6S5 226 aa12.97□□□□□ -0.33
CHMP1A-203ENST00000547614 Q8TAT8 98 aa12.97□□□□□ -0.33
CHMP1A-203ENST00000547614 OTORQ9NRC9 128 aa12.97□□□□□ -0.33
CHMP1A-203ENST00000547614 KLF12Q9Y4X4 402 aa12.97□□□□□ -0.33
CHMP1A-203ENST00000547614 TRGV1A0A0A0MS02 117 aa12.96□□□□□ -0.33
CHMP1A-203ENST00000547614 A0A0J9YY99 117 aa12.96□□□□□ -0.33
CHMP1A-203ENST00000547614 FAM74A1Q5RGS3 127 aa12.96□□□□□ -0.33
CHMP1A-203ENST00000547614 TMED6Q8WW62 240 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms