RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 IGLC6P0CF74 106 aa18.06■□□□□ 0.48
FOXA1-202ENST00000545425 ZFP36P26651 326 aaKnown RBP18.06■□□□□ 0.48
FOXA1-202ENST00000545425 C12orf54Q6X4T0 127 aa18.06■□□□□ 0.48
FOXA1-202ENST00000545425 FER1L6-AS1Q8NA97 138 aa18.06■□□□□ 0.48
FOXA1-202ENST00000545425 ZNF738Q8NE65 137 aa18.06■□□□□ 0.48
FOXA1-202ENST00000545425 PRELID3AQ96N28 172 aa18.06■□□□□ 0.48
FOXA1-202ENST00000545425 HIF1ANQ9NWT6 349 aa18.06■□□□□ 0.48
FOXA1-202ENST00000545425 KRTAP10-9P60411 292 aa18.05■□□□□ 0.48
FOXA1-202ENST00000545425 SCRT2Q9NQ03 307 aa18.05■□□□□ 0.48
FOXA1-202ENST00000545425 S4R3C0 116 aa18.05■□□□□ 0.48
FOXA1-202ENST00000545425 FABP5P3A8MUU1 101 aa18.05■□□□□ 0.48
FOXA1-202ENST00000545425 LINC01559Q495D7 138 aa18.05■□□□□ 0.48
FOXA1-202ENST00000545425 FBLN7Q53RD9 439 aa18.05■□□□□ 0.48
FOXA1-202ENST00000545425 LINC00173Q6ZV60 143 aa18.05■□□□□ 0.48
FOXA1-202ENST00000545425 SMAD5-AS1Q9Y6J3 95 aa18.05■□□□□ 0.48
FOXA1-202ENST00000545425 TRBV7-1A0A0A6YYK4 115 aa18.04■□□□□ 0.48
FOXA1-202ENST00000545425 UNQ5815/PRO19632Q6UWF5 114 aa18.04■□□□□ 0.48
FOXA1-202ENST00000545425 COX11Q9Y6N1 276 aa18.04■□□□□ 0.48
FOXA1-202ENST00000545425 IGKV2-40A0A087WW87 121 aaPredicted RBP18.03■□□□□ 0.48
FOXA1-202ENST00000545425 IGKV2D-40P01614 121 aaPredicted RBP18.03■□□□□ 0.48
FOXA1-202ENST00000545425 CSN3P07498 182 aa18.03■□□□□ 0.48
FOXA1-202ENST00000545425 TFPI2P48307 235 aa18.03■□□□□ 0.48
FOXA1-202ENST00000545425 HINT1P49773 126 aaPredicted RBP18.03■□□□□ 0.48
FOXA1-202ENST00000545425 Q71RC1 249 aaPredicted RBP18.03■□□□□ 0.48
FOXA1-202ENST00000545425 BCL6BQ8N143 479 aaPredicted RBP18.03■□□□□ 0.48
FOXA1-202ENST00000545425 EEF1AKMT3Q96AZ1 226 aa18.03■□□□□ 0.48
FOXA1-202ENST00000545425 ASCL2Q99929 193 aa18.03■□□□□ 0.48
FOXA1-202ENST00000545425 TPPP3Q9BW30 176 aa18.03■□□□□ 0.48
FOXA1-202ENST00000545425 ZFAND3Q9H8U3 227 aa18.03■□□□□ 0.48
FOXA1-202ENST00000545425 TACC2O95359 2948 aa18.03■□□□□ 0.48
FOXA1-202ENST00000545425 NPSP0C0P6 89 aa18.02■□□□□ 0.48
FOXA1-202ENST00000545425 C15orf32Q32M92 178 aa18.02■□□□□ 0.48
FOXA1-202ENST00000545425 OR1N2Q8NGR9 330 aa18.02■□□□□ 0.48
FOXA1-202ENST00000545425 D6R8Y8 96 aa18.02■□□□□ 0.47
FOXA1-202ENST00000545425 BUB3O43684 328 aa18.02■□□□□ 0.47
FOXA1-202ENST00000545425 LGALS9BQ3B8N2 356 aa18.02■□□□□ 0.47
FOXA1-202ENST00000545425 LGALS9CQ6DKI2 356 aa18.02■□□□□ 0.47
FOXA1-202ENST00000545425 POLQO75417 2590 aa18.01■□□□□ 0.47
FOXA1-202ENST00000545425 ZNF138P52744 262 aa18.01■□□□□ 0.47
FOXA1-202ENST00000545425 SIGLEC8Q9NYZ4 499 aa18.01■□□□□ 0.47
FOXA1-202ENST00000545425 CSMD1Q96PZ7 3565 aa18.01■□□□□ 0.47
FOXA1-202ENST00000545425 IGHG4P01861 327 aa18■□□□□ 0.47
FOXA1-202ENST00000545425 RHOGP84095 191 aa18■□□□□ 0.47
FOXA1-202ENST00000545425 HIST1H1AQ02539 215 aaPredicted RBP18■□□□□ 0.47
FOXA1-202ENST00000545425 MRPL51Q4U2R6 128 aaKnown RBP18■□□□□ 0.47
FOXA1-202ENST00000545425 LINC01546A6NGU7 62 aa18■□□□□ 0.47
FOXA1-202ENST00000545425 HBDP02042 147 aa18■□□□□ 0.47
FOXA1-202ENST00000545425 AJUBAQ96IF1 538 aa18■□□□□ 0.47
FOXA1-202ENST00000545425 PDZD2O15018 2839 aa17.99■□□□□ 0.47
FOXA1-202ENST00000545425 hDV102S1A0JD36 115 aa17.99■□□□□ 0.47
FOXA1-202ENST00000545425 COX8AP10176 69 aa17.98■□□□□ 0.47
FOXA1-202ENST00000545425 GPR183P32249 361 aa17.98■□□□□ 0.47
FOXA1-202ENST00000545425 IFI27P40305 119 aaPredicted RBP17.98■□□□□ 0.47
FOXA1-202ENST00000545425 CRIP2P52943 208 aaPredicted RBP17.98■□□□□ 0.47
FOXA1-202ENST00000545425 AMN1Q8IY45 258 aa17.98■□□□□ 0.47
FOXA1-202ENST00000545425 CENPVL3A0A0U1RRI6 287 aa17.98■□□□□ 0.47
FOXA1-202ENST00000545425 TMEM213A2RRL7 107 aa17.98■□□□□ 0.47
FOXA1-202ENST00000545425 ATP6V0E1O15342 81 aa17.98■□□□□ 0.47
FOXA1-202ENST00000545425 IGHV3-23P01764 117 aa17.98■□□□□ 0.47
FOXA1-202ENST00000545425 CKS2P33552 79 aa17.98■□□□□ 0.47
FOXA1-202ENST00000545425 METTL26Q96S19 204 aa17.98■□□□□ 0.47
FOXA1-202ENST00000545425 VGLL1Q99990 258 aa17.98■□□□□ 0.47
FOXA1-202ENST00000545425 NPFFO15130 113 aa17.97■□□□□ 0.47
FOXA1-202ENST00000545425 CLEC3BP05452 202 aa17.97■□□□□ 0.47
FOXA1-202ENST00000545425 SAA4P35542 130 aa17.97■□□□□ 0.47
FOXA1-202ENST00000545425 LMO4P61968 165 aa17.97■□□□□ 0.47
FOXA1-202ENST00000545425 TWIST1Q15672 202 aa17.97■□□□□ 0.47
FOXA1-202ENST00000545425 ABCA1O95477 2261 aa17.96■□□□□ 0.47
FOXA1-202ENST00000545425 SPG11Q96JI7 2443 aa17.96■□□□□ 0.47
FOXA1-202ENST00000545425 PRR31Q5SQ13 230 aa17.96■□□□□ 0.47
FOXA1-202ENST00000545425 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.96■□□□□ 0.47
FOXA1-202ENST00000545425 CCDC168Q8NDH2 2452 aa17.96■□□□□ 0.46
FOXA1-202ENST00000545425 TMSB15BA0A087X1C1 80 aa17.95■□□□□ 0.46
FOXA1-202ENST00000545425 FAM223BA6NKX1 122 aa17.95■□□□□ 0.46
FOXA1-202ENST00000545425 PAX8Q06710 450 aa17.95■□□□□ 0.46
FOXA1-202ENST00000545425 UBE2V1Q13404 147 aa17.95■□□□□ 0.46
FOXA1-202ENST00000545425 ECSCRQ19T08 205 aa17.95■□□□□ 0.46
FOXA1-202ENST00000545425 FAM223AQ8IWN6 122 aa17.95■□□□□ 0.46
FOXA1-202ENST00000545425 MAP1LC3AQ9H492 121 aa17.95■□□□□ 0.46
FOXA1-202ENST00000545425 U3KQE9 123 aa17.95■□□□□ 0.46
FOXA1-202ENST00000545425 CSMD2Q7Z408 3487 aa17.95■□□□□ 0.46
FOXA1-202ENST00000545425 TCF21O43680 179 aa17.95■□□□□ 0.46
FOXA1-202ENST00000545425 NXT2Q9NPJ8 142 aaKnown RBP17.95■□□□□ 0.46
FOXA1-202ENST00000545425 A0A096LNJ9 63 aa17.94■□□□□ 0.46
FOXA1-202ENST00000545425 BRI3O95415 125 aa17.94■□□□□ 0.46
FOXA1-202ENST00000545425 ORM1P02763 201 aa17.94■□□□□ 0.46
FOXA1-202ENST00000545425 ZNF80P51504 273 aaPredicted RBP17.94■□□□□ 0.46
FOXA1-202ENST00000545425 UBTD1Q9HAC8 227 aa17.94■□□□□ 0.46
FOXA1-202ENST00000545425 LENEPQ9Y5L5 61 aa17.94■□□□□ 0.46
FOXA1-202ENST00000545425 BVES-AS1Q5T3Y7 98 aa17.93■□□□□ 0.46
FOXA1-202ENST00000545425 ANKRD17O75179 2603 aaKnown RBP17.93■□□□□ 0.46
FOXA1-202ENST00000545425 DEFB125Q8N687 156 aa17.93■□□□□ 0.46
FOXA1-202ENST00000545425 C5orf56Q8N8D9 126 aa17.93■□□□□ 0.46
FOXA1-202ENST00000545425 Q8TAT8 98 aa17.93■□□□□ 0.46
FOXA1-202ENST00000545425 CCDC140Q96MF4 163 aa17.93■□□□□ 0.46
FOXA1-202ENST00000545425 MOB4Q9Y3A3 225 aa17.93■□□□□ 0.46
FOXA1-202ENST00000545425 OTOGQ6ZRI0 2925 aa17.92■□□□□ 0.46
FOXA1-202ENST00000545425 CLPSL1A2RUU4 121 aa17.92■□□□□ 0.46
FOXA1-202ENST00000545425 PTTG1IPP53801 180 aa17.92■□□□□ 0.46
FOXA1-202ENST00000545425 ATP5G2Q06055 141 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms