RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 RBMY1EA6NEQ0 496 aaKnown RBP17.02■□□□□ 0.31
HOMER3-205ENST00000542541 A8MTW9 85 aa17.02■□□□□ 0.31
HOMER3-205ENST00000542541 RBMY1DP0C7P1 496 aaKnown RBP17.02■□□□□ 0.31
HOMER3-205ENST00000542541 TOR2AQ5JU69 321 aa17.02■□□□□ 0.31
HOMER3-205ENST00000542541 MORN3Q6PF18 240 aaPredicted RBP17.02■□□□□ 0.31
HOMER3-205ENST00000542541 VGLL1Q99990 258 aa17.02■□□□□ 0.31
HOMER3-205ENST00000542541 ERCC8Q13216 396 aa17.01■□□□□ 0.31
HOMER3-205ENST00000542541 KIR2DL5BA0A0G2JN68 375 aa17■□□□□ 0.31
HOMER3-205ENST00000542541 KIR2DL5BA0A0G2JPC4 375 aa17■□□□□ 0.31
HOMER3-205ENST00000542541 ZNF138P52744 262 aa17■□□□□ 0.31
HOMER3-205ENST00000542541 APOC4P55056 127 aa17■□□□□ 0.31
HOMER3-205ENST00000542541 DEFA6Q01524 100 aa17■□□□□ 0.31
HOMER3-205ENST00000542541 LINC00322Q6ZN03 302 aaPredicted RBP17■□□□□ 0.31
HOMER3-205ENST00000542541 KIR2DL5AQ8N109 375 aa17■□□□□ 0.31
HOMER3-205ENST00000542541 KIR2DL5BQ8NHK3 375 aa17■□□□□ 0.31
HOMER3-205ENST00000542541 MRAPQ8TCY5 172 aa17■□□□□ 0.31
HOMER3-205ENST00000542541 FRMD6-AS1P0C7T7 363 aa16.99■□□□□ 0.31
HOMER3-205ENST00000542541 TMEM75Q8N9X5 138 aa16.99■□□□□ 0.31
HOMER3-205ENST00000542541 ODF3Q96PU9 254 aa16.99■□□□□ 0.31
HOMER3-205ENST00000542541 CSTL1Q9H114 145 aa16.99■□□□□ 0.31
HOMER3-205ENST00000542541 ZNF492Q9P255 531 aa16.99■□□□□ 0.31
HOMER3-205ENST00000542541 SCO2A0A1W2PP80 73 aa16.99■□□□□ 0.31
HOMER3-205ENST00000542541 NDUFS6O75380 124 aaKnown RBP16.99■□□□□ 0.31
HOMER3-205ENST00000542541 S100A9P06702 114 aaKnown RBP16.99■□□□□ 0.31
HOMER3-205ENST00000542541 TSPOP30536 169 aa16.99■□□□□ 0.31
HOMER3-205ENST00000542541 AKR1C3P42330 323 aa16.99■□□□□ 0.31
HOMER3-205ENST00000542541 AMTNQ6UX39 209 aa16.99■□□□□ 0.31
HOMER3-205ENST00000542541 C11orf52Q96A22 123 aa16.99■□□□□ 0.31
HOMER3-205ENST00000542541 TRBV7-9A0A0J9YWB2 115 aa16.98■□□□□ 0.31
HOMER3-205ENST00000542541 CT45A10P0DMU9 189 aa16.98■□□□□ 0.31
HOMER3-205ENST00000542541 UBE2G1P62253 170 aa16.98■□□□□ 0.31
HOMER3-205ENST00000542541 FLI1Q01543 452 aaPredicted RBP16.98■□□□□ 0.31
HOMER3-205ENST00000542541 PEA15Q15121 130 aa16.98■□□□□ 0.31
HOMER3-205ENST00000542541 FMC1Q96HJ9 113 aa16.98■□□□□ 0.31
HOMER3-205ENST00000542541 SMDT1Q9H4I9 107 aa16.98■□□□□ 0.31
HOMER3-205ENST00000542541 KLF12Q9Y4X4 402 aa16.98■□□□□ 0.31
HOMER3-205ENST00000542541 LENEPQ9Y5L5 61 aa16.98■□□□□ 0.31
HOMER3-205ENST00000542541 TRAV8-1A0A0A6YYK1 113 aa16.97■□□□□ 0.31
HOMER3-205ENST00000542541 C2CD4CQ8TF44 421 aa16.97■□□□□ 0.31
HOMER3-205ENST00000542541 C1QTNF4Q9BXJ3 329 aa16.97■□□□□ 0.31
HOMER3-205ENST00000542541 MED9Q9NWA0 146 aa16.97■□□□□ 0.31
HOMER3-205ENST00000542541 PSG8Q9UQ74 426 aa16.97■□□□□ 0.31
HOMER3-205ENST00000542541 TMEM250H0YL14 139 aa16.96■□□□□ 0.31
HOMER3-205ENST00000542541 UBE2CO00762 179 aa16.96■□□□□ 0.31
HOMER3-205ENST00000542541 AMBPP02760 352 aa16.96■□□□□ 0.31
HOMER3-205ENST00000542541 LEPP41159 167 aa16.96■□□□□ 0.31
HOMER3-205ENST00000542541 LINC00479Q96M42 142 aa16.96■□□□□ 0.31
HOMER3-205ENST00000542541 NDFIP1Q9BT67 221 aa16.96■□□□□ 0.31
HOMER3-205ENST00000542541 AGRNO00468 2067 aa16.96■□□□□ 0.31
HOMER3-205ENST00000542541 TRAV34A0A0B4J273 112 aa16.96■□□□□ 0.3
HOMER3-205ENST00000542541 TMEM183BQ1AE95 376 aa16.96■□□□□ 0.3
HOMER3-205ENST00000542541 SGK494Q96LW2 274 aa16.96■□□□□ 0.3
HOMER3-205ENST00000542541 SLC35B3Q9H1N7 401 aa16.96■□□□□ 0.3
HOMER3-205ENST00000542541 RAB19A4D1S5 217 aa16.95■□□□□ 0.3
HOMER3-205ENST00000542541 IGLV2-11P01706 119 aa16.95■□□□□ 0.3
HOMER3-205ENST00000542541 CDKN1BP46527 198 aa16.95■□□□□ 0.3
HOMER3-205ENST00000542541 SAPCD1Q5SSQ6 148 aa16.95■□□□□ 0.3
HOMER3-205ENST00000542541 PRNTQ86SH4 94 aa16.95■□□□□ 0.3
HOMER3-205ENST00000542541 Q8TAT8 98 aa16.95■□□□□ 0.3
HOMER3-205ENST00000542541 TRBV6-1A0A0K0K1D8 114 aa16.94■□□□□ 0.3
HOMER3-205ENST00000542541 CA1P00915 261 aaPredicted RBP16.94■□□□□ 0.3
HOMER3-205ENST00000542541 SPINK13Q1W4C9 94 aa16.94■□□□□ 0.3
HOMER3-205ENST00000542541 FAM19A4Q96LR4 140 aa16.94■□□□□ 0.3
HOMER3-205ENST00000542541 M0R2Z0 102 aa16.93■□□□□ 0.3
HOMER3-205ENST00000542541 CRISP2P16562 243 aa16.93■□□□□ 0.3
HOMER3-205ENST00000542541 FXYD7P58549 80 aa16.93■□□□□ 0.3
HOMER3-205ENST00000542541 ZFP30Q9Y2G7 519 aa16.93■□□□□ 0.3
HOMER3-205ENST00000542541 RPL35P42766 123 aaKnown RBP16.92■□□□□ 0.3
HOMER3-205ENST00000542541 TAS2R60P59551 318 aa16.92■□□□□ 0.3
HOMER3-205ENST00000542541 TREM1Q9NP99 234 aa16.92■□□□□ 0.3
HOMER3-205ENST00000542541 GPX1P07203 203 aa16.92■□□□□ 0.3
HOMER3-205ENST00000542541 XCL2Q9UBD3 114 aa16.92■□□□□ 0.3
HOMER3-205ENST00000542541 SRP19P09132 144 aaKnown RBP16.91■□□□□ 0.3
HOMER3-205ENST00000542541 Q86TA4 180 aa16.91■□□□□ 0.3
HOMER3-205ENST00000542541 GIG44P09565 113 aaPredicted RBP16.9■□□□□ 0.3
HOMER3-205ENST00000542541 SRSF3P84103 164 aaKnown RBP16.9■□□□□ 0.3
HOMER3-205ENST00000542541 IGF2BP2-AS1Q96M15 143 aa16.9■□□□□ 0.3
HOMER3-205ENST00000542541 KLLNB2CW77 178 aa16.89■□□□□ 0.29
HOMER3-205ENST00000542541 LTAP01374 205 aa16.89■□□□□ 0.29
HOMER3-205ENST00000542541 CEBPGP53567 150 aa16.89■□□□□ 0.29
HOMER3-205ENST00000542541 Q6ZWC4 215 aa16.89■□□□□ 0.29
HOMER3-205ENST00000542541 ZFAND2AQ8N6M9 145 aa16.89■□□□□ 0.29
HOMER3-205ENST00000542541 TVP23CQ96ET8 276 aa16.89■□□□□ 0.29
HOMER3-205ENST00000542541 DERL1Q9BUN8 251 aa16.89■□□□□ 0.29
HOMER3-205ENST00000542541 LINC00862A6NCI5 91 aa16.88■□□□□ 0.29
HOMER3-205ENST00000542541 J3KRW8 73 aa16.88■□□□□ 0.29
HOMER3-205ENST00000542541 INSP01308 110 aa16.88■□□□□ 0.29
HOMER3-205ENST00000542541 BAGE2Q86Y30 109 aa16.88■□□□□ 0.29
HOMER3-205ENST00000542541 PRKDCP78527 4128 aaKnown RBP16.88■□□□□ 0.29
HOMER3-205ENST00000542541 TRAV12-2A0A075B6T6 113 aa16.88■□□□□ 0.29
HOMER3-205ENST00000542541 ASCL2Q99929 193 aa16.88■□□□□ 0.29
HOMER3-205ENST00000542541 PARLQ9H300 379 aa16.88■□□□□ 0.29
HOMER3-205ENST00000542541 CRXO43186 299 aaPredicted RBP16.87■□□□□ 0.29
HOMER3-205ENST00000542541 RNASE4P34096 147 aaKnown RBP16.87■□□□□ 0.29
HOMER3-205ENST00000542541 GNG4P50150 75 aa16.87■□□□□ 0.29
HOMER3-205ENST00000542541 SMUG1Q53HV7 270 aa16.87■□□□□ 0.29
HOMER3-205ENST00000542541 UQCC3Q6UW78 93 aa16.87■□□□□ 0.29
HOMER3-205ENST00000542541 C20orf144Q9BQM9 153 aa16.87■□□□□ 0.29
HOMER3-205ENST00000542541 C7orf71A4D174 169 aa16.86■□□□□ 0.29
HOMER3-205ENST00000542541 ZNF674Q2M3X9 581 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms