RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 IGHV4-59P01825 116 aa11.89□□□□□ -0.51
CLPTM1-202ENST00000541297 PSG1P11464 419 aa11.89□□□□□ -0.51
CLPTM1-202ENST00000541297 MUC21Q5SSG8 566 aa11.89□□□□□ -0.51
CLPTM1-202ENST00000541297 FAM162BQ5T6X4 162 aa11.89□□□□□ -0.51
CLPTM1-202ENST00000541297 SLC25A34Q6PIV7 304 aa11.89□□□□□ -0.51
CLPTM1-202ENST00000541297 CHCHD1Q96BP2 118 aaKnown RBP11.89□□□□□ -0.51
CLPTM1-202ENST00000541297 KLF12Q9Y4X4 402 aa11.89□□□□□ -0.51
CLPTM1-202ENST00000541297 BLCAPP62952 87 aa11.88□□□□□ -0.51
CLPTM1-202ENST00000541297 PRSS22Q9GZN4 317 aa11.88□□□□□ -0.51
CLPTM1-202ENST00000541297 A8MWL6 223 aa11.88□□□□□ -0.51
CLPTM1-202ENST00000541297 H0Y8G0 127 aa11.88□□□□□ -0.51
CLPTM1-202ENST00000541297 H3BTX0 84 aa11.88□□□□□ -0.51
CLPTM1-202ENST00000541297 IGKV1-17P01599 117 aa11.88□□□□□ -0.51
CLPTM1-202ENST00000541297 RHOGP84095 191 aa11.88□□□□□ -0.51
CLPTM1-202ENST00000541297 Q6ZS46 218 aa11.88□□□□□ -0.51
CLPTM1-202ENST00000541297 FAM110DQ8TAY7 271 aaPredicted RBP11.88□□□□□ -0.51
CLPTM1-202ENST00000541297 SONP18583 2426 aaKnown RBP11.88□□□□□ -0.51
CLPTM1-202ENST00000541297 P01737 135 aa11.88□□□□□ -0.51
CLPTM1-202ENST00000541297 LYZP61626 148 aa11.88□□□□□ -0.51
CLPTM1-202ENST00000541297 VPS25Q9BRG1 176 aa11.88□□□□□ -0.51
CLPTM1-202ENST00000541297 THYN1Q9P016 225 aa11.88□□□□□ -0.51
CLPTM1-202ENST00000541297 GNG7O60262 68 aa11.87□□□□□ -0.51
CLPTM1-202ENST00000541297 TMEM191AQ9H0A3 160 aa11.87□□□□□ -0.51
CLPTM1-202ENST00000541297 ACANP16112 2415 aa11.87□□□□□ -0.51
CLPTM1-202ENST00000541297 NBEAP1P0C6P0 100 aa11.87□□□□□ -0.51
CLPTM1-202ENST00000541297 IL17RELQ6ZVW7 336 aa11.87□□□□□ -0.51
CLPTM1-202ENST00000541297 DEFB125Q8N687 156 aa11.87□□□□□ -0.51
CLPTM1-202ENST00000541297 C21orf62Q9NYP8 219 aa11.87□□□□□ -0.51
CLPTM1-202ENST00000541297 TIMM8BQ9Y5J9 83 aaPredicted RBP11.87□□□□□ -0.51
CLPTM1-202ENST00000541297 CUBNO60494 3623 aa11.87□□□□□ -0.51
CLPTM1-202ENST00000541297 C19orf71A6NCJ1 209 aa11.86□□□□□ -0.51
CLPTM1-202ENST00000541297 HSBP1L1C9JCN9 74 aa11.86□□□□□ -0.51
CLPTM1-202ENST00000541297 F8W735 103 aaPredicted RBP11.86□□□□□ -0.51
CLPTM1-202ENST00000541297 MFAP4P55083 255 aa11.86□□□□□ -0.51
CLPTM1-202ENST00000541297 C15orf32Q32M92 178 aa11.86□□□□□ -0.51
CLPTM1-202ENST00000541297 AMMECR1LQ6DCA0 310 aa11.86□□□□□ -0.51
CLPTM1-202ENST00000541297 PMCHL2Q9BQD1 86 aa11.86□□□□□ -0.51
CLPTM1-202ENST00000541297 SCRT2Q9NQ03 307 aa11.86□□□□□ -0.51
CLPTM1-202ENST00000541297 SMIM12Q96EX1 92 aa11.86□□□□□ -0.51
CLPTM1-202ENST00000541297 CST9LQ9H4G1 147 aa11.86□□□□□ -0.51
CLPTM1-202ENST00000541297 A0A087X0K7 114 aa11.85□□□□□ -0.51
CLPTM1-202ENST00000541297 TRAV41A0A0B4J266 112 aa11.85□□□□□ -0.51
CLPTM1-202ENST00000541297 FSHBP01225 129 aa11.85□□□□□ -0.51
CLPTM1-202ENST00000541297 LTAP01374 205 aa11.85□□□□□ -0.51
CLPTM1-202ENST00000541297 RBPMS2Q6ZRY4 209 aaKnown RBP11.85□□□□□ -0.51
CLPTM1-202ENST00000541297 DAZAP1Q96EP5 407 aaKnown RBP11.85□□□□□ -0.51
CLPTM1-202ENST00000541297 MAP1LC3CQ9BXW4 147 aa11.85□□□□□ -0.51
CLPTM1-202ENST00000541297 CHEK1O14757 476 aa11.85□□□□□ -0.51
CLPTM1-202ENST00000541297 C12orf54Q6X4T0 127 aa11.85□□□□□ -0.51
CLPTM1-202ENST00000541297 CSN3P07498 182 aa11.84□□□□□ -0.51
CLPTM1-202ENST00000541297 CT83Q5H943 113 aa11.84□□□□□ -0.51
CLPTM1-202ENST00000541297 STXBP6Q8NFX7 210 aa11.84□□□□□ -0.51
CLPTM1-202ENST00000541297 FMC1Q96HJ9 113 aa11.84□□□□□ -0.51
CLPTM1-202ENST00000541297 ZNF48Q96MX3 618 aaPredicted RBP11.84□□□□□ -0.51
CLPTM1-202ENST00000541297 NDFIP1Q9BT67 221 aa11.84□□□□□ -0.51
CLPTM1-202ENST00000541297 TMEM238C9JI98 176 aa11.84□□□□□ -0.51
CLPTM1-202ENST00000541297 Q71RC1 249 aaPredicted RBP11.84□□□□□ -0.51
CLPTM1-202ENST00000541297 ZNF492Q9P255 531 aa11.84□□□□□ -0.51
CLPTM1-202ENST00000541297 CHTOPQ9Y3Y2 248 aaKnown RBP11.84□□□□□ -0.51
CLPTM1-202ENST00000541297 IGHV3-35A0A0C4DH35 117 aa11.83□□□□□ -0.52
CLPTM1-202ENST00000541297 TCRAP04437 139 aa11.83□□□□□ -0.52
CLPTM1-202ENST00000541297 FOXE3Q13461 319 aa11.83□□□□□ -0.52
CLPTM1-202ENST00000541297 OCIAD2Q56VL3 154 aa11.83□□□□□ -0.52
CLPTM1-202ENST00000541297 C5orf17Q8NAS9 161 aa11.83□□□□□ -0.52
CLPTM1-202ENST00000541297 Q9H3A6 140 aa11.83□□□□□ -0.52
CLPTM1-202ENST00000541297 TRAV8-1A0A0A6YYK1 113 aa11.83□□□□□ -0.52
CLPTM1-202ENST00000541297 PPBPP02775 128 aa11.83□□□□□ -0.52
CLPTM1-202ENST00000541297 IL4P05112 153 aa11.83□□□□□ -0.52
CLPTM1-202ENST00000541297 OR5AL1P0C617 328 aa11.83□□□□□ -0.52
CLPTM1-202ENST00000541297 PET117Q6UWS5 81 aa11.83□□□□□ -0.52
CLPTM1-202ENST00000541297 IGHG2P01859 326 aa11.82□□□□□ -0.52
CLPTM1-202ENST00000541297 GPR183P32249 361 aa11.82□□□□□ -0.52
CLPTM1-202ENST00000541297 PSG9Q00887 426 aa11.82□□□□□ -0.52
CLPTM1-202ENST00000541297 TMEM95Q3KNT9 176 aa11.82□□□□□ -0.52
CLPTM1-202ENST00000541297 GFRA4Q9GZZ7 299 aa11.82□□□□□ -0.52
CLPTM1-202ENST00000541297 HIGD1AQ9Y241 93 aa11.82□□□□□ -0.52
CLPTM1-202ENST00000541297 MYO9AB2RTY4 2548 aa11.82□□□□□ -0.52
CLPTM1-202ENST00000541297 GP9P14770 177 aa11.82□□□□□ -0.52
CLPTM1-202ENST00000541297 IGHV3OR16-8A0A075B7F1 116 aa11.81□□□□□ -0.52
CLPTM1-202ENST00000541297 SNAI2O43623 268 aa11.81□□□□□ -0.52
CLPTM1-202ENST00000541297 PLP1P60201 277 aa11.81□□□□□ -0.52
CLPTM1-202ENST00000541297 ZNF491Q8N8L2 437 aa11.81□□□□□ -0.52
CLPTM1-202ENST00000541297 DUX5Q96PT3 197 aa11.81□□□□□ -0.52
CLPTM1-202ENST00000541297 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.81□□□□□ -0.52
CLPTM1-202ENST00000541297 TRAV8-6A0A0B4J262 113 aa11.81□□□□□ -0.52
CLPTM1-202ENST00000541297 CD5LO43866 347 aa11.81□□□□□ -0.52
CLPTM1-202ENST00000541297 CTSGP08311 255 aa11.81□□□□□ -0.52
CLPTM1-202ENST00000541297 C19orf54Q5BKX5 351 aa11.81□□□□□ -0.52
CLPTM1-202ENST00000541297 SMIM15Q7Z3B0 74 aa11.81□□□□□ -0.52
CLPTM1-202ENST00000541297 RNF125Q96EQ8 232 aa11.81□□□□□ -0.52
CLPTM1-202ENST00000541297 ZC2HC1AQ96GY0 325 aa11.81□□□□□ -0.52
CLPTM1-202ENST00000541297 FOXC2Q99958 501 aa11.81□□□□□ -0.52
CLPTM1-202ENST00000541297 NOTCH2Q04721 2471 aa11.81□□□□□ -0.52
CLPTM1-202ENST00000541297 HOXA3O43365 443 aaPredicted RBP11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 APOHP02749 345 aaPredicted RBP11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 IGF1P05019 195 aa11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 CLEC3BP05452 202 aa11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 RPS20P60866 119 aaKnown RBP11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 HIST1H1AQ02539 215 aaPredicted RBP11.8□□□□□ -0.52
CLPTM1-202ENST00000541297 CLEC19AQ6UXS0 136 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms