RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 S100A1P23297 94 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 HLA-DMBP28068 263 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 GNG4P50150 75 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 FAM74A3Q4VXF1 159 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 PSMG4Q5JS54 123 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 GOLT1AQ6ZVE7 132 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 CCDC28AQ8IWP9 274 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 TMEM61Q8N0U2 210 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 ATG101Q9BSB4 218 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 DERL1Q9BUN8 251 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 MCRIP2Q9BUT9 160 aaKnown RBP4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 PARLQ9H300 379 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 SIGLEC8Q9NYZ4 499 aa4.99□□□□□ -1.61
CLTCL1-206ENST00000540896 TRAV34A0A0B4J273 112 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 SERTM2A0A1B0GWG4 89 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 PRAC2D3DTV9 90 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 K7EQG2 157 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 M0R036 132 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 NDUFS6O75380 124 aaKnown RBP4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 ZNF688P0C7X2 276 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 RPL35P42766 123 aaKnown RBP4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 INSL3P51460 131 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 TMEM241Q24JQ0 296 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 C9orf66Q5T8R8 295 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 PRNTQ86SH4 94 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 OR2K2Q8NGT1 345 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 OR10J6PQ8NGY7 276 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 DCANP1Q8TF63 244 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 C11orf52Q96A22 123 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 MRPL53Q96EL3 112 aaKnown RBP4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 SGK494Q96LW2 274 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 LINC00479Q96M42 142 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 SPAG8Q99932 426 aaPredicted RBP4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 NIPSNAP3BQ9BS92 247 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 SEC11CQ9BY50 192 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 PPP1R14DQ9NXH3 145 aa4.98□□□□□ -1.61
CLTCL1-206ENST00000540896 WNK1Q9H4A3 2382 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 IGKV2-40A0A087WW87 121 aaPredicted RBP4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 TRAV8-1A0A0A6YYK1 113 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 TRAV2A0A0B4J234 112 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 IZUMO1RA6ND01 250 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 FBLL1A6NHQ2 334 aaKnown RBP4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 C9orf118A6NHY6 69 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 SOCS3O14543 225 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 IGKV2D-40P01614 121 aaPredicted RBP4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 IGLV1-51P01701 117 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 MGST1P10620 155 aaKnown RBP4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 CMC4P56277 68 aaPredicted RBP4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 TAS2R60P59551 318 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 FLI1Q01543 452 aaPredicted RBP4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 HIST1H1AQ02539 215 aaPredicted RBP4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 TMEM183BQ1AE95 376 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 CENPWQ5EE01 88 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 PRR31Q5SQ13 230 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 TMEM78Q5T7P6 136 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 EBLN2Q6P2I7 272 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 BAGE2Q86Y30 109 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 SVBPQ8N300 66 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 FAM24BQ8N5W8 94 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 ARL6IP6Q8N6S5 226 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 C2CD4CQ8TF44 421 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 TVP23CQ96ET8 276 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 FMC1Q96HJ9 113 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 NAT8Q9UHE5 227 aa4.97□□□□□ -1.61
CLTCL1-206ENST00000540896 SNAPINO95295 136 aa4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 ZNF705DP0CH99 300 aaPredicted RBP4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 ZNF705BP0CI00 300 aaPredicted RBP4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 IGLL1P15814 213 aa4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 ADCYAP1P18509 176 aa4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 DEFB131AP59861 70 aa4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 DEFB1P60022 68 aa4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 ERCC8Q13216 396 aa4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 ADIRFQ15847 76 aa4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 TMEM75Q8N9X5 138 aa4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 NHLRC2Q8NBF2 726 aa4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 WFDC9Q8NEX5 89 aa4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 C8orf49Q96NF6 230 aa4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 VGLL1Q99990 258 aa4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 NDFIP1Q9BT67 221 aa4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 AURKAIP1Q9NWT8 199 aaPredicted RBP4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 PSG8Q9UQ74 426 aa4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 CARHSP1Q9Y2V2 147 aaKnown RBP4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 KLF12Q9Y4X4 402 aa4.96□□□□□ -1.62
CLTCL1-206ENST00000540896 CMYA5Q8N3K9 4069 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 RBAKDNA6NC62 111 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 PGPEP1LA6NFU8 196 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 OR11H12B2RN74 326 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 C9JCJ5 164 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 F6UB75 175 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 DUSP14O95147 198 aaKnown RBP4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 IGKV3-20P01619 116 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 ZNF138P52744 262 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 PNRC1Q12796 327 aaPredicted RBP4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 ACTL10Q5JWF8 245 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 SAPCD1Q5SSQ6 148 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 C10orf91Q5T1B1 145 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 C9orf47Q6ZRZ4 202 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 OR4B1Q8NGF8 309 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 OR8A1Q8NGG7 326 aa4.95□□□□□ -1.62
CLTCL1-206ENST00000540896 OCC1Q8TAD7 63 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms