RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SMPXQ9UHP9 88 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 PHLDA3Q9Y5J5 127 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 GCN1Q92616 2671 aaKnown RBP4.19□□□□□ -1.74
PROM1-220ENST00000540805 LINC01548A6NM66 108 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 VWC2LB2RUY7 222 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 NDUFS7O75251 213 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 COX8AP10176 69 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 ATP5IP56385 69 aaPredicted RBP4.19□□□□□ -1.74
PROM1-220ENST00000540805 GNG5P63218 68 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 CD69Q07108 199 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 HSD52Q0P140 79 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 IL17RELQ6ZVW7 336 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.19□□□□□ -1.74
PROM1-220ENST00000540805 RNF183Q96D59 192 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 ZNF48Q96MX3 618 aaPredicted RBP4.19□□□□□ -1.74
PROM1-220ENST00000540805 C21orf62Q9NYP8 219 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 ZNF257Q9Y2Q1 563 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 AGRNO00468 2067 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 A0A0G2JLM5 398 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 TCRBV4S1A1TA0A5B7 111 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 A6NDN8 102 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 M0R381 172 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 SAA2P0DJI9 122 aaPredicted RBP4.19□□□□□ -1.74
PROM1-220ENST00000540805 EFNA4P52798 201 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 ETDBQ3ZM63 59 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 TMEM97Q5BJF2 176 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 SCGB1D4Q6XE38 83 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 OR8A1Q8NGG7 326 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 OR2K2Q8NGT1 345 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 OR10AG1Q8NH19 301 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 ZNF502Q8TBZ5 544 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 PGLYRP4Q96LB8 373 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 ASCL2Q99929 193 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 PRSS22Q9GZN4 317 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 SPCS1Q9Y6A9 102 aa4.19□□□□□ -1.74
PROM1-220ENST00000540805 UPK2O00526 184 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 CEACAM4O75871 244 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 RNASE2P10153 161 aaKnown RBP4.18□□□□□ -1.74
PROM1-220ENST00000540805 TWIST1Q15672 202 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 POU2AF1Q16633 256 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 CT83Q5H943 113 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 SFTA2Q6UW10 78 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 C1orf229Q6ZS94 237 aaPredicted RBP4.18□□□□□ -1.74
PROM1-220ENST00000540805 EEF1AKMT3Q96AZ1 226 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 C20orf78Q9BR46 151 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 BEX4Q9NWD9 120 aaPredicted RBP4.18□□□□□ -1.74
PROM1-220ENST00000540805 CSMD2Q7Z408 3487 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 SIVA1O15304 175 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 SNRPD3P62318 126 aaKnown RBP4.18□□□□□ -1.74
PROM1-220ENST00000540805 MLANAQ16655 118 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 LINC01545Q5VT33 79 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 SRSF12Q8WXF0 261 aaKnown RBP4.18□□□□□ -1.74
PROM1-220ENST00000540805 GPR82Q96P67 336 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 TEX50A0A1B0GTY4 177 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 C9orf118A6NHY6 69 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 B5MCH6 92 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 H3BRM9 83 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 K7EP34 96 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 PRSS2P07478 247 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 PSG3Q16557 428 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 ADAMTSL5Q6ZMM2 481 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 DEFB104AQ8WTQ1 72 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 NRGNQ92686 78 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 TMEM133Q9H2Q1 129 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 EPDR1Q9UM22 224 aa4.18□□□□□ -1.74
PROM1-220ENST00000540805 TRGV2A0A075B6R0 118 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 IGKV1D-17A0A075B6S4 117 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 TMEM189A5PLL7 270 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 B4DSR2 109 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 IGHG3P01860 377 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 CR1LQ2VPA4 569 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 FAM159AQ6UWV7 190 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 BOD1L2Q8IYS8 172 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 FXYD5Q96DB9 178 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 SPAG8Q99932 426 aaPredicted RBP4.17□□□□□ -1.74
PROM1-220ENST00000540805 ZNF492Q9P255 531 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 GRNP28799 593 aaKnown RBP4.17□□□□□ -1.74
PROM1-220ENST00000540805 RIGQ13278 110 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 ZNF56Q15929 161 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 SMIM20Q8N5G0 67 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 GTSF1Q8WW33 167 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 GFRA4Q9GZZ7 299 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 DKK4Q9UBT3 224 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 LINC00312Q9Y6C7 94 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 SRRM5B3KS81 715 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 LYPD2Q6UXB3 125 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 SEM1Q6ZVN7 128 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 LINC00305Q7Z4B0 112 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 PCP2Q8IVA1 136 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 FMC1Q96HJ9 113 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 Q96MF0 132 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 LINC01587Q99440 93 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 AP5S1Q9NUS5 200 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 PSG8Q9UQ74 426 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 SLC25A15Q9Y619 301 aa4.17□□□□□ -1.74
PROM1-220ENST00000540805 E7EQL1 145 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 H3BMG7 143 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 NBR2O15453 112 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 MT-ATP8P03928 68 aa4.16□□□□□ -1.74
PROM1-220ENST00000540805 SAA1P0DJI8 122 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms