RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 OR2T8A6NH00 312 aa13.26□□□□□ -0.29
PCDHB17P-201ENST00000539533 IGHG2P01859 326 aa13.26□□□□□ -0.29
PCDHB17P-201ENST00000539533 C19orf54Q5BKX5 351 aa13.26□□□□□ -0.29
PCDHB17P-201ENST00000539533 LINC00322Q6ZN03 302 aaPredicted RBP13.26□□□□□ -0.29
PCDHB17P-201ENST00000539533 ZNF48Q96MX3 618 aaPredicted RBP13.26□□□□□ -0.29
PCDHB17P-201ENST00000539533 AKAP9Q99996 3911 aa13.26□□□□□ -0.29
PCDHB17P-201ENST00000539533 KLK9Q2XQG4 91 aa13.25□□□□□ -0.29
PCDHB17P-201ENST00000539533 FAM162BQ5T6X4 162 aa13.25□□□□□ -0.29
PCDHB17P-201ENST00000539533 KLK9Q9UKQ9 250 aa13.25□□□□□ -0.29
PCDHB17P-201ENST00000539533 C9orf139Q6ZV77 190 aa13.25□□□□□ -0.29
PCDHB17P-201ENST00000539533 PRSS22Q9GZN4 317 aa13.25□□□□□ -0.29
PCDHB17P-201ENST00000539533 OR4C46A6NHA9 309 aa13.24□□□□□ -0.29
PCDHB17P-201ENST00000539533 A8MWL6 223 aa13.24□□□□□ -0.29
PCDHB17P-201ENST00000539533 NUDT3O95989 172 aa13.24□□□□□ -0.29
PCDHB17P-201ENST00000539533 IGF1P05019 195 aa13.24□□□□□ -0.29
PCDHB17P-201ENST00000539533 NBEAP1P0C6P0 100 aa13.24□□□□□ -0.29
PCDHB17P-201ENST00000539533 CRIP2P52943 208 aaPredicted RBP13.24□□□□□ -0.29
PCDHB17P-201ENST00000539533 FOXA3P55318 350 aaPredicted RBP13.24□□□□□ -0.29
PCDHB17P-201ENST00000539533 RPS20P60866 119 aaKnown RBP13.24□□□□□ -0.29
PCDHB17P-201ENST00000539533 GTSF1Q8WW33 167 aa13.24□□□□□ -0.29
PCDHB17P-201ENST00000539533 FOXC2Q99958 501 aa13.24□□□□□ -0.29
PCDHB17P-201ENST00000539533 CTSGP08311 255 aa13.24□□□□□ -0.29
PCDHB17P-201ENST00000539533 CT83Q5H943 113 aa13.24□□□□□ -0.29
PCDHB17P-201ENST00000539533 IL17RELQ6ZVW7 336 aa13.24□□□□□ -0.29
PCDHB17P-201ENST00000539533 ZNF491Q8N8L2 437 aa13.24□□□□□ -0.29
PCDHB17P-201ENST00000539533 HIGD1AQ9Y241 93 aa13.24□□□□□ -0.29
PCDHB17P-201ENST00000539533 LTAP01374 205 aa13.23□□□□□ -0.29
PCDHB17P-201ENST00000539533 P01737 135 aa13.23□□□□□ -0.29
PCDHB17P-201ENST00000539533 S100A7P31151 101 aa13.23□□□□□ -0.29
PCDHB17P-201ENST00000539533 BVES-AS1Q5T3Y7 98 aa13.23□□□□□ -0.29
PCDHB17P-201ENST00000539533 AMMECR1LQ6DCA0 310 aa13.23□□□□□ -0.29
PCDHB17P-201ENST00000539533 Q6YL49 198 aa13.23□□□□□ -0.29
PCDHB17P-201ENST00000539533 ZNF502Q8TBZ5 544 aa13.23□□□□□ -0.29
PCDHB17P-201ENST00000539533 FMC1Q96HJ9 113 aa13.23□□□□□ -0.29
PCDHB17P-201ENST00000539533 PGLYRP4Q96LB8 373 aa13.23□□□□□ -0.29
PCDHB17P-201ENST00000539533 C19orf71A6NCJ1 209 aa13.23□□□□□ -0.29
PCDHB17P-201ENST00000539533 CRXO43186 299 aaPredicted RBP13.23□□□□□ -0.29
PCDHB17P-201ENST00000539533 IL4P05112 153 aa13.23□□□□□ -0.29
PCDHB17P-201ENST00000539533 C5orf17Q8NAS9 161 aa13.23□□□□□ -0.29
PCDHB17P-201ENST00000539533 ST20Q9HBF5 79 aa13.23□□□□□ -0.29
PCDHB17P-201ENST00000539533 ZNF492Q9P255 531 aa13.23□□□□□ -0.29
PCDHB17P-201ENST00000539533 IGHV1-24A0A0C4DH33 117 aa13.22□□□□□ -0.29
PCDHB17P-201ENST00000539533 MUC21A0A0G2JKD1 596 aa13.22□□□□□ -0.29
PCDHB17P-201ENST00000539533 MUC21A0A140T8X8 626 aa13.22□□□□□ -0.29
PCDHB17P-201ENST00000539533 hDV102S1A0JD36 115 aa13.22□□□□□ -0.29
PCDHB17P-201ENST00000539533 MUC21Q5SSG8 566 aa13.22□□□□□ -0.29
PCDHB17P-201ENST00000539533 CHCHD1Q96BP2 118 aaKnown RBP13.22□□□□□ -0.29
PCDHB17P-201ENST00000539533 RNF125Q96EQ8 232 aa13.22□□□□□ -0.29
PCDHB17P-201ENST00000539533 SLC25A39Q9BZJ4 359 aaPredicted RBP13.22□□□□□ -0.29
PCDHB17P-201ENST00000539533 LOC102724200A0A096LPH7 203 aaPredicted RBP13.22□□□□□ -0.29
PCDHB17P-201ENST00000539533 CLEC3BP05452 202 aa13.22□□□□□ -0.29
PCDHB17P-201ENST00000539533 GP9P14770 177 aa13.22□□□□□ -0.29
PCDHB17P-201ENST00000539533 FCGR2BP31994 310 aaPredicted RBP13.22□□□□□ -0.29
PCDHB17P-201ENST00000539533 GPR183P32249 361 aa13.22□□□□□ -0.29
PCDHB17P-201ENST00000539533 DEFB125Q8N687 156 aa13.22□□□□□ -0.29
PCDHB17P-201ENST00000539533 IGHV3-35A0A0C4DH35 117 aa13.21□□□□□ -0.29
PCDHB17P-201ENST00000539533 WI2-2373I1.2A0A1W2PRP0 233 aa13.21□□□□□ -0.29
PCDHB17P-201ENST00000539533 H3BTX0 84 aa13.21□□□□□ -0.29
PCDHB17P-201ENST00000539533 TCRAP04437 139 aa13.21□□□□□ -0.29
PCDHB17P-201ENST00000539533 PPIFP30405 207 aaKnown RBP13.21□□□□□ -0.29
PCDHB17P-201ENST00000539533 LINC00173Q6ZV60 143 aa13.21□□□□□ -0.29
PCDHB17P-201ENST00000539533 CCDC140Q96MF4 163 aa13.21□□□□□ -0.29
PCDHB17P-201ENST00000539533 CSTL1Q9H114 145 aa13.21□□□□□ -0.29
PCDHB17P-201ENST00000539533 SYS1-DBNDD2H3BUS1 97 aa13.21□□□□□ -0.3
PCDHB17P-201ENST00000539533 TMEM95Q3KNT9 176 aa13.21□□□□□ -0.3
PCDHB17P-201ENST00000539533 SLC25A34Q6PIV7 304 aa13.21□□□□□ -0.3
PCDHB17P-201ENST00000539533 RBPMS2Q6ZRY4 209 aaKnown RBP13.21□□□□□ -0.3
PCDHB17P-201ENST00000539533 DAZAP1Q96EP5 407 aaKnown RBP13.21□□□□□ -0.3
PCDHB17P-201ENST00000539533 GFRA4Q9GZZ7 299 aa13.21□□□□□ -0.3
PCDHB17P-201ENST00000539533 Q9H3A6 140 aa13.21□□□□□ -0.3
PCDHB17P-201ENST00000539533 ACANP16112 2415 aa13.2□□□□□ -0.3
PCDHB17P-201ENST00000539533 SONP18583 2426 aaKnown RBP13.2□□□□□ -0.3
PCDHB17P-201ENST00000539533 HOXA3O43365 443 aaPredicted RBP13.2□□□□□ -0.3
PCDHB17P-201ENST00000539533 LEPROTL1O95214 131 aa13.2□□□□□ -0.3
PCDHB17P-201ENST00000539533 CLEC19AQ6UXS0 136 aa13.2□□□□□ -0.3
PCDHB17P-201ENST00000539533 TRGV3P03979 118 aa13.2□□□□□ -0.3
PCDHB17P-201ENST00000539533 VPREB3Q9UKI3 123 aa13.2□□□□□ -0.3
PCDHB17P-201ENST00000539533 ATP5G2Q06055 141 aa13.19□□□□□ -0.3
PCDHB17P-201ENST00000539533 ZNF414Q96IQ9 312 aa13.19□□□□□ -0.3
PCDHB17P-201ENST00000539533 IGHV3OR16-8A0A075B7F1 116 aa13.18□□□□□ -0.3
PCDHB17P-201ENST00000539533 PSG9Q00887 426 aa13.18□□□□□ -0.3
PCDHB17P-201ENST00000539533 KRTAP1-1Q07627 177 aa13.18□□□□□ -0.3
PCDHB17P-201ENST00000539533 C12orf54Q6X4T0 127 aa13.18□□□□□ -0.3
PCDHB17P-201ENST00000539533 EEF1AKMT3Q96AZ1 226 aa13.18□□□□□ -0.3
PCDHB17P-201ENST00000539533 CHEK1O14757 476 aa13.18□□□□□ -0.3
PCDHB17P-201ENST00000539533 DUX5Q96PT3 197 aa13.18□□□□□ -0.3
PCDHB17P-201ENST00000539533 NDFIP1Q9BT67 221 aa13.18□□□□□ -0.3
PCDHB17P-201ENST00000539533 SHANK2-AS3Q9BTD1 123 aa13.18□□□□□ -0.3
PCDHB17P-201ENST00000539533 KLK15Q9H2R5 256 aa13.18□□□□□ -0.3
PCDHB17P-201ENST00000539533 FAM231BA6NCW3 169 aa13.17□□□□□ -0.3
PCDHB17P-201ENST00000539533 NPIPB6E9PJ23 425 aa13.17□□□□□ -0.3
PCDHB17P-201ENST00000539533 K7ERU9 68 aa13.17□□□□□ -0.3
PCDHB17P-201ENST00000539533 LCNL1Q6ZST4 164 aa13.17□□□□□ -0.3
PCDHB17P-201ENST00000539533 Q86TA4 180 aa13.17□□□□□ -0.3
PCDHB17P-201ENST00000539533 GAGE12BA1L429 117 aa13.17□□□□□ -0.3
PCDHB17P-201ENST00000539533 HSBP1L1C9JCN9 74 aa13.17□□□□□ -0.3
PCDHB17P-201ENST00000539533 H3BRN7 92 aa13.17□□□□□ -0.3
PCDHB17P-201ENST00000539533 TRAV8-1A0A0A6YYK1 113 aa13.16□□□□□ -0.3
PCDHB17P-201ENST00000539533 TRBV7-1A0A0A6YYK4 115 aa13.16□□□□□ -0.3
PCDHB17P-201ENST00000539533 FAM223BA6NKX1 122 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms