RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SPATA25Q9BR10 227 aa8.84□□□□□ -0.99
CHD4-203ENST00000535717 ZMAT4Q9H898 229 aa8.84□□□□□ -0.99
CHD4-203ENST00000535717 CLEC5AQ9NY25 188 aa8.84□□□□□ -0.99
CHD4-203ENST00000535717 PRAC2D3DTV9 90 aa8.83□□□□□ -1
CHD4-203ENST00000535717 M0R3E3 92 aa8.83□□□□□ -1
CHD4-203ENST00000535717 CA1P00915 261 aaPredicted RBP8.83□□□□□ -1
CHD4-203ENST00000535717 MT-ND4LP03901 98 aa8.83□□□□□ -1
CHD4-203ENST00000535717 CNN1P51911 297 aaKnown RBP8.83□□□□□ -1
CHD4-203ENST00000535717 BLOC1S1P78537 153 aa8.83□□□□□ -1
CHD4-203ENST00000535717 DEFB135Q30KP9 77 aa8.83□□□□□ -1
CHD4-203ENST00000535717 FAM74A1Q5RGS3 127 aa8.83□□□□□ -1
CHD4-203ENST00000535717 MORN3Q6PF18 240 aaPredicted RBP8.83□□□□□ -1
CHD4-203ENST00000535717 Q6ZWC4 215 aa8.83□□□□□ -1
CHD4-203ENST00000535717 CBLN2Q8IUK8 224 aa8.83□□□□□ -1
CHD4-203ENST00000535717 OR4B1Q8NGF8 309 aa8.83□□□□□ -1
CHD4-203ENST00000535717 OR8A1Q8NGG7 326 aa8.83□□□□□ -1
CHD4-203ENST00000535717 TMED6Q8WW62 240 aa8.83□□□□□ -1
CHD4-203ENST00000535717 CTXND1A0A1B0GTU2 59 aa8.82□□□□□ -1
CHD4-203ENST00000535717 A8MTW9 85 aa8.82□□□□□ -1
CHD4-203ENST00000535717 GCHFRP30047 84 aa8.82□□□□□ -1
CHD4-203ENST00000535717 FHITP49789 147 aa8.82□□□□□ -1
CHD4-203ENST00000535717 RANP62826 216 aaKnown RBP8.82□□□□□ -1
CHD4-203ENST00000535717 HIST1H1AQ02539 215 aaPredicted RBP8.82□□□□□ -1
CHD4-203ENST00000535717 ICAM4Q14773 271 aa8.82□□□□□ -1
CHD4-203ENST00000535717 AMTNQ6UX39 209 aa8.82□□□□□ -1
CHD4-203ENST00000535717 MRPL53Q96EL3 112 aaKnown RBP8.82□□□□□ -1
CHD4-203ENST00000535717 RCHY1Q96PM5 261 aa8.82□□□□□ -1
CHD4-203ENST00000535717 OVOL2Q9BRP0 275 aa8.82□□□□□ -1
CHD4-203ENST00000535717 AAMDCQ9H7C9 122 aa8.82□□□□□ -1
CHD4-203ENST00000535717 NIT2Q9NQR4 276 aa8.82□□□□□ -1
CHD4-203ENST00000535717 U3KQK5 164 aa8.82□□□□□ -1
CHD4-203ENST00000535717 UMAD1C9J7I0 102 aa8.81□□□□□ -1
CHD4-203ENST00000535717 SPRY2O43597 315 aa8.81□□□□□ -1
CHD4-203ENST00000535717 DUSP14O95147 198 aaKnown RBP8.81□□□□□ -1
CHD4-203ENST00000535717 CXorf1O96002 111 aa8.81□□□□□ -1
CHD4-203ENST00000535717 RAB5CP51148 216 aa8.81□□□□□ -1
CHD4-203ENST00000535717 FXYD7P58549 80 aa8.81□□□□□ -1
CHD4-203ENST00000535717 LYPD1Q8N2G4 141 aa8.81□□□□□ -1
CHD4-203ENST00000535717 RNF183Q96D59 192 aa8.81□□□□□ -1
CHD4-203ENST00000535717 SLC35B3Q9H1N7 401 aa8.81□□□□□ -1
CHD4-203ENST00000535717 Q9H3A6 140 aa8.81□□□□□ -1
CHD4-203ENST00000535717 TP53TG1Q9Y2A0 90 aa8.81□□□□□ -1
CHD4-203ENST00000535717 FGF8P55075 233 aaPredicted RBP8.8□□□□□ -1
CHD4-203ENST00000535717 NUTF2P61970 127 aaKnown RBP8.8□□□□□ -1
CHD4-203ENST00000535717 TMEM88Q6PEY1 159 aa8.8□□□□□ -1
CHD4-203ENST00000535717 CSNK1G2-AS1Q8NCQ2 148 aa8.8□□□□□ -1
CHD4-203ENST00000535717 OR10J6PQ8NGY7 276 aa8.8□□□□□ -1
CHD4-203ENST00000535717 FAM213BQ8TBF2 198 aa8.8□□□□□ -1
CHD4-203ENST00000535717 HIST1H2BAQ96A08 127 aa8.8□□□□□ -1
CHD4-203ENST00000535717 XCL2Q9UBD3 114 aa8.8□□□□□ -1
CHD4-203ENST00000535717 MAP1LC3B2A6NCE7 125 aa8.79□□□□□ -1
CHD4-203ENST00000535717 NPIPB6E9PJ23 425 aa8.79□□□□□ -1
CHD4-203ENST00000535717 SNRPEP62304 92 aaKnown RBP8.79□□□□□ -1
CHD4-203ENST00000535717 DPPA3Q6W0C5 159 aa8.79□□□□□ -1
CHD4-203ENST00000535717 MAP1LC3BQ9GZQ8 125 aa8.79□□□□□ -1
CHD4-203ENST00000535717 OTORQ9NRC9 128 aa8.79□□□□□ -1
CHD4-203ENST00000535717 TMEM167BQ9NRX6 74 aa8.79□□□□□ -1
CHD4-203ENST00000535717 IGKV2-40A0A087WW87 121 aaPredicted RBP8.78□□□□□ -1
CHD4-203ENST00000535717 PGPA6NDG6 321 aa8.78□□□□□ -1
CHD4-203ENST00000535717 M0R2Z0 102 aa8.78□□□□□ -1
CHD4-203ENST00000535717 IGKV2D-40P01614 121 aaPredicted RBP8.78□□□□□ -1
CHD4-203ENST00000535717 CT45A10P0DMU9 189 aa8.78□□□□□ -1
CHD4-203ENST00000535717 ERCC8Q13216 396 aa8.78□□□□□ -1
CHD4-203ENST00000535717 RHEBQ15382 184 aa8.78□□□□□ -1
CHD4-203ENST00000535717 SPINK13Q1W4C9 94 aa8.78□□□□□ -1
CHD4-203ENST00000535717 LYPD6BQ8NI32 183 aa8.78□□□□□ -1
CHD4-203ENST00000535717 MBD3L1Q8WWY6 194 aa8.78□□□□□ -1
CHD4-203ENST00000535717 C1QTNF4Q9BXJ3 329 aa8.78□□□□□ -1
CHD4-203ENST00000535717 CSN1S1P47710 185 aa8.77□□□□□ -1.01
CHD4-203ENST00000535717 SULT1A2P50226 295 aa8.77□□□□□ -1.01
CHD4-203ENST00000535717 OR11H2Q8NH07 326 aa8.77□□□□□ -1.01
CHD4-203ENST00000535717 VGLL1Q99990 258 aa8.77□□□□□ -1.01
CHD4-203ENST00000535717 AGPAT4-IT1Q9H0P7 198 aa8.77□□□□□ -1.01
CHD4-203ENST00000535717 GGTLC3B5MD39 225 aa8.76□□□□□ -1.01
CHD4-203ENST00000535717 DIRC3C9JPN6 131 aa8.76□□□□□ -1.01
CHD4-203ENST00000535717 CRXO43186 299 aaPredicted RBP8.76□□□□□ -1.01
CHD4-203ENST00000535717 TAS2R60P59551 318 aa8.76□□□□□ -1.01
CHD4-203ENST00000535717 FABP9Q0Z7S8 132 aa8.76□□□□□ -1.01
CHD4-203ENST00000535717 C9orf47Q6ZRZ4 202 aa8.76□□□□□ -1.01
CHD4-203ENST00000535717 CMTM2Q8TAZ6 248 aa8.76□□□□□ -1.01
CHD4-203ENST00000535717 C2CD4CQ8TF44 421 aa8.76□□□□□ -1.01
CHD4-203ENST00000535717 IGF2BP2-AS1Q96M15 143 aa8.76□□□□□ -1.01
CHD4-203ENST00000535717 RARRES2Q99969 163 aa8.76□□□□□ -1.01
CHD4-203ENST00000535717 C2orf88Q9BSF0 95 aa8.76□□□□□ -1.01
CHD4-203ENST00000535717 SMDT1Q9H4I9 107 aa8.76□□□□□ -1.01
CHD4-203ENST00000535717 YTHDF2Q9Y5A9 579 aaKnown RBP8.76□□□□□ -1.01
CHD4-203ENST00000535717 DNAH7Q8WXX0 4024 aa8.76□□□□□ -1.01
CHD4-203ENST00000535717 TRAV12-2A0A075B6T6 113 aa8.75□□□□□ -1.01
CHD4-203ENST00000535717 A0A1B0GV50 99 aa8.75□□□□□ -1.01
CHD4-203ENST00000535717 A0A1W2PRE2 83 aa8.75□□□□□ -1.01
CHD4-203ENST00000535717 ZNF705EA8MWA4 302 aaPredicted RBP8.75□□□□□ -1.01
CHD4-203ENST00000535717 NDUFS6O75380 124 aaKnown RBP8.75□□□□□ -1.01
CHD4-203ENST00000535717 AMBPP02760 352 aa8.75□□□□□ -1.01
CHD4-203ENST00000535717 SLC25A5P05141 298 aaKnown RBP8.75□□□□□ -1.01
CHD4-203ENST00000535717 HOXA5P20719 270 aa8.75□□□□□ -1.01
CHD4-203ENST00000535717 UBE2G2P60604 165 aa8.75□□□□□ -1.01
CHD4-203ENST00000535717 SUMO1P63165 101 aaKnown RBP8.75□□□□□ -1.01
CHD4-203ENST00000535717 GNG5P63218 68 aa8.75□□□□□ -1.01
CHD4-203ENST00000535717 KIR3DS1Q14943 382 aa8.75□□□□□ -1.01
CHD4-203ENST00000535717 C1orf158Q8N1D5 194 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms