RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 IL15RAQ13261 267 aa12.38□□□□□ -0.43
PCF11-206ENST00000533018 GCSAMLQ5JQS6 135 aa12.38□□□□□ -0.43
PCF11-206ENST00000533018 EXOC3-AS1Q8N2X6 119 aa12.38□□□□□ -0.43
PCF11-206ENST00000533018 CHAC2Q8WUX2 184 aa12.38□□□□□ -0.43
PCF11-206ENST00000533018 ZNF503Q96F45 646 aa12.38□□□□□ -0.43
PCF11-206ENST00000533018 LINC00477Q96M19 166 aa12.38□□□□□ -0.43
PCF11-206ENST00000533018 GSN-AS1Q9NRJ2 163 aa12.38□□□□□ -0.43
PCF11-206ENST00000533018 NDUFB4O95168 129 aa12.37□□□□□ -0.43
PCF11-206ENST00000533018 GPX1P07203 203 aa12.37□□□□□ -0.43
PCF11-206ENST00000533018 NHLH2Q02577 135 aa12.37□□□□□ -0.43
PCF11-206ENST00000533018 CD300CQ08708 224 aa12.37□□□□□ -0.43
PCF11-206ENST00000533018 BTN1A1Q13410 526 aa12.37□□□□□ -0.43
PCF11-206ENST00000533018 PDE6HQ13956 83 aa12.37□□□□□ -0.43
PCF11-206ENST00000533018 FAM122CQ6P4D5 195 aa12.37□□□□□ -0.43
PCF11-206ENST00000533018 ZNF680Q8NEM1 530 aa12.37□□□□□ -0.43
PCF11-206ENST00000533018 AGPAT4-IT1Q9H0P7 198 aa12.37□□□□□ -0.43
PCF11-206ENST00000533018 TRGV1A0A0A0MS02 117 aa12.36□□□□□ -0.43
PCF11-206ENST00000533018 SIX6O95475 246 aa12.36□□□□□ -0.43
PCF11-206ENST00000533018 ICAM4Q14773 271 aa12.36□□□□□ -0.43
PCF11-206ENST00000533018 ESRGQ1W209 222 aa12.36□□□□□ -0.43
PCF11-206ENST00000533018 TTC32Q5I0X7 151 aa12.36□□□□□ -0.43
PCF11-206ENST00000533018 TMEM78Q5T7P6 136 aa12.36□□□□□ -0.43
PCF11-206ENST00000533018 EIF4E3Q8N5X7 224 aaKnown RBP12.36□□□□□ -0.43
PCF11-206ENST00000533018 OR5C1Q8NGR4 320 aa12.36□□□□□ -0.43
PCF11-206ENST00000533018 SLC25A2Q9BXI2 301 aa12.36□□□□□ -0.43
PCF11-206ENST00000533018 SLC25A31Q9H0C2 315 aa12.36□□□□□ -0.43
PCF11-206ENST00000533018 LRP1BQ9NZR2 4599 aa12.36□□□□□ -0.43
PCF11-206ENST00000533018 H3BNG1 76 aa12.35□□□□□ -0.43
PCF11-206ENST00000533018 LRRC37A5PQ49AS3 106 aa12.35□□□□□ -0.43
PCF11-206ENST00000533018 ENKURQ8TC29 256 aa12.35□□□□□ -0.43
PCF11-206ENST00000533018 IGKV2-40A0A087WW87 121 aaPredicted RBP12.34□□□□□ -0.43
PCF11-206ENST00000533018 KLLNB2CW77 178 aa12.34□□□□□ -0.43
PCF11-206ENST00000533018 RGS13O14921 159 aa12.34□□□□□ -0.43
PCF11-206ENST00000533018 ZNF324O75467 553 aaPredicted RBP12.34□□□□□ -0.43
PCF11-206ENST00000533018 IGKV2D-40P01614 121 aaPredicted RBP12.34□□□□□ -0.43
PCF11-206ENST00000533018 MIR17HGQ75NE6 70 aa12.34□□□□□ -0.43
PCF11-206ENST00000533018 C11orf72Q8NBR9 251 aa12.34□□□□□ -0.43
PCF11-206ENST00000533018 FUT9Q9Y231 359 aa12.34□□□□□ -0.43
PCF11-206ENST00000533018 HSPG2P98160 4391 aa12.34□□□□□ -0.43
PCF11-206ENST00000533018 E5RGE8 158 aa12.33□□□□□ -0.44
PCF11-206ENST00000533018 NBEAP1P0C6P0 100 aa12.33□□□□□ -0.44
PCF11-206ENST00000533018 ASAH1Q13510 395 aa12.33□□□□□ -0.44
PCF11-206ENST00000533018 ANXA2RQ3ZCQ2 193 aa12.33□□□□□ -0.44
PCF11-206ENST00000533018 S100ZQ8WXG8 99 aa12.33□□□□□ -0.44
PCF11-206ENST00000533018 FAM19A4Q96LR4 140 aa12.33□□□□□ -0.44
PCF11-206ENST00000533018 VGLL1Q99990 258 aa12.33□□□□□ -0.44
PCF11-206ENST00000533018 OR51M1Q9H341 326 aa12.33□□□□□ -0.44
PCF11-206ENST00000533018 Q9H3A6 140 aa12.33□□□□□ -0.44
PCF11-206ENST00000533018 KLF12Q9Y4X4 402 aa12.33□□□□□ -0.44
PCF11-206ENST00000533018 OR10J4P0C629 311 aa12.32□□□□□ -0.44
PCF11-206ENST00000533018 C9orf47Q6ZRZ4 202 aa12.32□□□□□ -0.44
PCF11-206ENST00000533018 SPATA12Q7Z6I5 190 aa12.32□□□□□ -0.44
PCF11-206ENST00000533018 ARPC5LQ9BPX5 153 aa12.32□□□□□ -0.44
PCF11-206ENST00000533018 UPK3BQ9BT76 320 aa12.32□□□□□ -0.44
PCF11-206ENST00000533018 PAXXQ9BUH6 204 aa12.32□□□□□ -0.44
PCF11-206ENST00000533018 KRTAP1-5Q9BYS1 174 aa12.32□□□□□ -0.44
PCF11-206ENST00000533018 KCNIP2Q9NS61 270 aa12.32□□□□□ -0.44
PCF11-206ENST00000533018 OR5AC2Q9NZP5 309 aa12.32□□□□□ -0.44
PCF11-206ENST00000533018 MRPS16Q9Y3D3 137 aaKnown RBP12.32□□□□□ -0.44
PCF11-206ENST00000533018 A0A096LPF7 62 aa12.31□□□□□ -0.44
PCF11-206ENST00000533018 C17orf112F2Z3M2 114 aa12.31□□□□□ -0.44
PCF11-206ENST00000533018 CRISP2P16562 243 aa12.31□□□□□ -0.44
PCF11-206ENST00000533018 VSIG2Q96IQ7 327 aa12.31□□□□□ -0.44
PCF11-206ENST00000533018 FAM167A-AS1Q96KT0 104 aa12.31□□□□□ -0.44
PCF11-206ENST00000533018 LINC00467Q9BRT7 94 aa12.31□□□□□ -0.44
PCF11-206ENST00000533018 NMES1Q9C002 83 aa12.31□□□□□ -0.44
PCF11-206ENST00000533018 TP53TG3Q9ULZ0 132 aa12.31□□□□□ -0.44
PCF11-206ENST00000533018 DNAH5Q8TE73 4624 aa12.3□□□□□ -0.44
PCF11-206ENST00000533018 OR7C2O60412 319 aa12.3□□□□□ -0.44
PCF11-206ENST00000533018 SPINK4O60575 86 aa12.3□□□□□ -0.44
PCF11-206ENST00000533018 IGHV3-53P01767 116 aa12.3□□□□□ -0.44
PCF11-206ENST00000533018 TCL1AP56279 114 aa12.3□□□□□ -0.44
PCF11-206ENST00000533018 MRPL32Q9BYC8 188 aaKnown RBP12.3□□□□□ -0.44
PCF11-206ENST00000533018 WDR61Q9GZS3 305 aaKnown RBP12.3□□□□□ -0.44
PCF11-206ENST00000533018 ZNF492Q9P255 531 aa12.3□□□□□ -0.44
PCF11-206ENST00000533018 IGHV1OR15-1A0A075B7D0 117 aa12.29□□□□□ -0.44
PCF11-206ENST00000533018 A0A1W2PPQ1 181 aa12.29□□□□□ -0.44
PCF11-206ENST00000533018 PAX4O43316 350 aa12.29□□□□□ -0.44
PCF11-206ENST00000533018 NMBP08949 121 aa12.29□□□□□ -0.44
PCF11-206ENST00000533018 CSN1S1P47710 185 aa12.29□□□□□ -0.44
PCF11-206ENST00000533018 CYCSP99999 105 aaKnown RBP12.29□□□□□ -0.44
PCF11-206ENST00000533018 PRR9Q5T870 116 aa12.29□□□□□ -0.44
PCF11-206ENST00000533018 Q6ZQT7 251 aa12.29□□□□□ -0.44
PCF11-206ENST00000533018 LINC00299Q6ZSB3 139 aa12.29□□□□□ -0.44
PCF11-206ENST00000533018 ZFAND2AQ8N6M9 145 aa12.29□□□□□ -0.44
PCF11-206ENST00000533018 Q8TAT8 98 aa12.29□□□□□ -0.44
PCF11-206ENST00000533018 C18orf15Q96N68 181 aa12.29□□□□□ -0.44
PCF11-206ENST00000533018 MRPL16Q9NX20 251 aaKnown RBP12.29□□□□□ -0.44
PCF11-206ENST00000533018 CDK2AP2O75956 126 aa12.28□□□□□ -0.44
PCF11-206ENST00000533018 ZNF138P52744 262 aa12.28□□□□□ -0.44
PCF11-206ENST00000533018 RANP62826 216 aaKnown RBP12.28□□□□□ -0.44
PCF11-206ENST00000533018 IBA57Q5T440 356 aaKnown RBP12.28□□□□□ -0.44
PCF11-206ENST00000533018 FXYD5Q96DB9 178 aa12.28□□□□□ -0.44
PCF11-206ENST00000533018 PHYHIPLQ96FC7 376 aa12.28□□□□□ -0.44
PCF11-206ENST00000533018 KRTAP4-5Q9BYR2 181 aa12.28□□□□□ -0.44
PCF11-206ENST00000533018 ICOSQ9Y6W8 199 aa12.28□□□□□ -0.44
PCF11-206ENST00000533018 H0YIZ8 118 aa12.27□□□□□ -0.45
PCF11-206ENST00000533018 UPK1BO75841 260 aa12.27□□□□□ -0.45
PCF11-206ENST00000533018 MAPKAPK5-AS1Q8N8E1 139 aa12.27□□□□□ -0.45
PCF11-206ENST00000533018 ST6GAL2Q96JF0 529 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 165.8 ms