RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 LCN6P62502 163 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 DYNLT1P63172 113 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 RNASE10Q5GAN6 216 aaKnown RBP1.08□□□□□ -2.24
CD44-234ENST00000531873 Q8IYB0 196 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 Q8N2B8 174 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 SERPINI1Q99574 410 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 PRADC1Q9BSG0 188 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 ACER3Q9NUN7 267 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 PCTPQ9UKL6 214 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 CCNB3Q8WWL7 1395 aa1.08□□□□□ -2.24
CD44-234ENST00000531873 FRYLO94915 3013 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 AKAP13Q12802 2813 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 F8P00451 2351 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 ASXL3Q9C0F0 2248 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 CENPEQ02224 2701 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 ABCC6O95255 1503 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 DUXBA0A1W2PPF3 345 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 C2orf70A6NJV1 201 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 F8W036 122 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 AIPO00170 330 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 CST8O60676 142 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 MGST1P10620 155 aaKnown RBP1.07□□□□□ -2.24
CD44-234ENST00000531873 RNASE3P12724 160 aaKnown RBP1.07□□□□□ -2.24
CD44-234ENST00000531873 SSR2P43308 183 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 INSL3P51460 131 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 SNCBQ16143 134 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 SPANXN5Q5MJ07 72 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 BRMS1LQ5PSV4 323 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 SOSTDC1Q6X4U4 206 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 PHF13Q86YI8 300 aaPredicted RBP1.07□□□□□ -2.24
CD44-234ENST00000531873 PDZD9Q8IXQ8 264 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 C10orf126Q8N4M7 172 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 LINC00311Q8N616 119 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 ZNF418Q8TF45 676 aaPredicted RBP1.07□□□□□ -2.24
CD44-234ENST00000531873 MRPL32Q9BYC8 188 aaKnown RBP1.07□□□□□ -2.24
CD44-234ENST00000531873 BCL2L10Q9HD36 194 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 SSR3Q9UNL2 185 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 FREM2Q5SZK8 3169 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 OTOGQ6ZRI0 2925 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 PIK3C2BO00750 1634 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 TECTAO75443 2155 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 UNC13CQ8NB66 2214 aa1.07□□□□□ -2.24
CD44-234ENST00000531873 COL6A6A6NMZ7 2263 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 MYO15AQ9UKN7 3530 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 N4BP2Q86UW6 1770 aaPredicted RBP1.06□□□□□ -2.24
CD44-234ENST00000531873 ITPR2Q14571 2701 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 TNRC6BQ9UPQ9 1833 aaKnown RBP1.06□□□□□ -2.24
CD44-234ENST00000531873 TMEM256-PLSCR3K7ERE1 68 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 BANF1O75531 89 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 LYZL6O75951 148 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 UBL3O95164 117 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 CSN2P05814 226 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 BAALC-AS2P0C853 105 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 NFYBP25208 207 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 GLRXP35754 106 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 PDE6HQ13956 83 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 ESRGQ1W209 222 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 TRIQKQ629K1 86 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 C3orf33Q6P1S2 294 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 C22orf39Q6P5X5 142 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 GRINAQ7Z429 371 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 STX12Q86Y82 276 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 LINC00471Q8N535 108 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 CANT1Q8WVQ1 401 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 CARD19Q96LW7 228 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 GPX7Q96SL4 187 aaPredicted RBP1.06□□□□□ -2.24
CD44-234ENST00000531873 NAA38Q9BRA0 125 aaKnown RBP1.06□□□□□ -2.24
CD44-234ENST00000531873 ADAT1Q9BUB4 502 aaKnown RBP1.06□□□□□ -2.24
CD44-234ENST00000531873 PBOV1Q9GZY1 135 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 NHP2Q9NX24 153 aaKnown RBP1.06□□□□□ -2.24
CD44-234ENST00000531873 CRCT1Q9UGL9 99 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 HS3ST2Q9Y278 367 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 LMO7Q8WWI1 1683 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 CTTNBP2Q8WZ74 1663 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 DMXL2Q8TDJ6 3036 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 NBASA2RRP1 2371 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 LRRC37A2A6NM11 1700 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 MYO18AQ92614 2054 aaKnown RBP1.06□□□□□ -2.24
CD44-234ENST00000531873 TGP01266 2768 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 FREM3P0C091 2139 aa1.06□□□□□ -2.24
CD44-234ENST00000531873 CELSR2Q9HCU4 2923 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 AKAP11Q9UKA4 1901 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 TANC2Q9HCD6 1990 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 HIVEP3Q5T1R4 2406 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 TRGV10A0A0A0MS01 117 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 TRAV14DV4A0A0A6YYC5 116 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 RIIAD1A6NNX1 92 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 PPP5D1E7EU14 171 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 MRPS14O60783 128 aaKnown RBP1.05□□□□□ -2.24
CD44-234ENST00000531873 CRHP06850 196 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 IDO1P14902 403 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 TCTAP57738 103 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 B2MP61769 119 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 LTC4SQ16873 150 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 DEFB113Q30KQ7 82 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 SCGB2B2Q4G0G5 96 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 C10orf55Q5SWW7 151 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 STX19Q8N4C7 294 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 DEFB124Q8NES8 71 aa1.05□□□□□ -2.24
CD44-234ENST00000531873 SLC30A7Q8NEW0 376 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms