RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 FXYD7P58549 80 aa13.02□□□□□ -0.33
CTSB-222ENST00000531551 SRSF3P84103 164 aaKnown RBP13.02□□□□□ -0.33
CTSB-222ENST00000531551 TRPT1Q86TN4 253 aaKnown RBP13.02□□□□□ -0.33
CTSB-222ENST00000531551 Q8TAT8 98 aa13.02□□□□□ -0.33
CTSB-222ENST00000531551 RBAKDNA6NC62 111 aa13.01□□□□□ -0.33
CTSB-222ENST00000531551 NPIPB6E9PJ23 425 aa13.01□□□□□ -0.33
CTSB-222ENST00000531551 UBE2G1P62253 170 aa13.01□□□□□ -0.33
CTSB-222ENST00000531551 C9orf47Q6ZRZ4 202 aa13.01□□□□□ -0.33
CTSB-222ENST00000531551 LOC102724200A0A096LPH7 203 aaPredicted RBP13□□□□□ -0.33
CTSB-222ENST00000531551 J3KRW8 73 aa13□□□□□ -0.33
CTSB-222ENST00000531551 CT45A10P0DMU9 189 aa13□□□□□ -0.33
CTSB-222ENST00000531551 PEA15Q15121 130 aa13□□□□□ -0.33
CTSB-222ENST00000531551 PRNTQ86SH4 94 aa13□□□□□ -0.33
CTSB-222ENST00000531551 LINC00477Q96M19 166 aa13□□□□□ -0.33
CTSB-222ENST00000531551 RBMY1BA6NDE4 496 aaKnown RBP12.99□□□□□ -0.33
CTSB-222ENST00000531551 RBMY1EA6NEQ0 496 aaKnown RBP12.99□□□□□ -0.33
CTSB-222ENST00000531551 RBMY1DP0C7P1 496 aaKnown RBP12.99□□□□□ -0.33
CTSB-222ENST00000531551 ZNF138P52744 262 aa12.99□□□□□ -0.33
CTSB-222ENST00000531551 SLC35B3Q9H1N7 401 aa12.99□□□□□ -0.33
CTSB-222ENST00000531551 TREM1Q9NP99 234 aa12.99□□□□□ -0.33
CTSB-222ENST00000531551 PSG8Q9UQ74 426 aa12.99□□□□□ -0.33
CTSB-222ENST00000531551 FLI1Q01543 452 aaPredicted RBP12.99□□□□□ -0.33
CTSB-222ENST00000531551 TMEM75Q8N9X5 138 aa12.99□□□□□ -0.33
CTSB-222ENST00000531551 DERL1Q9BUN8 251 aa12.99□□□□□ -0.33
CTSB-222ENST00000531551 NUTF2P61970 127 aaKnown RBP12.98□□□□□ -0.33
CTSB-222ENST00000531551 DEFA6Q01524 100 aa12.98□□□□□ -0.33
CTSB-222ENST00000531551 SPINK13Q1W4C9 94 aa12.98□□□□□ -0.33
CTSB-222ENST00000531551 COMMD7Q86VX2 200 aa12.98□□□□□ -0.33
CTSB-222ENST00000531551 C2CD4CQ8TF44 421 aa12.98□□□□□ -0.33
CTSB-222ENST00000531551 C11orf52Q96A22 123 aa12.98□□□□□ -0.33
CTSB-222ENST00000531551 ZNF492Q9P255 531 aa12.98□□□□□ -0.33
CTSB-222ENST00000531551 M0R2Z0 102 aa12.97□□□□□ -0.33
CTSB-222ENST00000531551 FRMD6-AS1P0C7T7 363 aa12.97□□□□□ -0.33
CTSB-222ENST00000531551 RPL35P42766 123 aaKnown RBP12.97□□□□□ -0.33
CTSB-222ENST00000531551 ZNF674Q2M3X9 581 aa12.97□□□□□ -0.33
CTSB-222ENST00000531551 MRAPQ8TCY5 172 aa12.97□□□□□ -0.33
CTSB-222ENST00000531551 FMC1Q96HJ9 113 aa12.97□□□□□ -0.33
CTSB-222ENST00000531551 RAB19A4D1S5 217 aa12.97□□□□□ -0.33
CTSB-222ENST00000531551 C9JQL5 133 aa12.97□□□□□ -0.33
CTSB-222ENST00000531551 IGLV2-11P01706 119 aa12.97□□□□□ -0.33
CTSB-222ENST00000531551 SRP19P09132 144 aaKnown RBP12.97□□□□□ -0.33
CTSB-222ENST00000531551 AMTNQ6UX39 209 aa12.97□□□□□ -0.33
CTSB-222ENST00000531551 AGRNO00468 2067 aa12.96□□□□□ -0.33
CTSB-222ENST00000531551 TRAV12-2A0A075B6T6 113 aa12.96□□□□□ -0.33
CTSB-222ENST00000531551 TMEM250H0YL14 139 aa12.96□□□□□ -0.33
CTSB-222ENST00000531551 CA1P00915 261 aaPredicted RBP12.96□□□□□ -0.33
CTSB-222ENST00000531551 TMEM183BQ1AE95 376 aa12.96□□□□□ -0.33
CTSB-222ENST00000531551 NDFIP1Q9BT67 221 aa12.96□□□□□ -0.33
CTSB-222ENST00000531551 CSTL1Q9H114 145 aa12.96□□□□□ -0.33
CTSB-222ENST00000531551 A8MZ25 164 aa12.95□□□□□ -0.34
CTSB-222ENST00000531551 MORN3Q6PF18 240 aaPredicted RBP12.95□□□□□ -0.34
CTSB-222ENST00000531551 Q86TA4 180 aa12.95□□□□□ -0.34
CTSB-222ENST00000531551 XCL2Q9UBD3 114 aa12.95□□□□□ -0.34
CTSB-222ENST00000531551 LINC00862A6NCI5 91 aa12.95□□□□□ -0.34
CTSB-222ENST00000531551 FBLL1A6NHQ2 334 aaKnown RBP12.95□□□□□ -0.34
CTSB-222ENST00000531551 LEPP41159 167 aa12.95□□□□□ -0.34
CTSB-222ENST00000531551 CDKN1BP46527 198 aa12.95□□□□□ -0.34
CTSB-222ENST00000531551 APOC4P55056 127 aa12.95□□□□□ -0.34
CTSB-222ENST00000531551 KIR3DS1Q14943 382 aa12.95□□□□□ -0.34
CTSB-222ENST00000531551 CLUHP3Q96NS8 147 aa12.95□□□□□ -0.34
CTSB-222ENST00000531551 PARLQ9H300 379 aa12.95□□□□□ -0.34
CTSB-222ENST00000531551 SMDT1Q9H4I9 107 aa12.95□□□□□ -0.34
CTSB-222ENST00000531551 KLF12Q9Y4X4 402 aa12.95□□□□□ -0.34
CTSB-222ENST00000531551 A8MTW9 85 aa12.94□□□□□ -0.34
CTSB-222ENST00000531551 S100A9P06702 114 aaKnown RBP12.94□□□□□ -0.34
CTSB-222ENST00000531551 GPX1P07203 203 aa12.94□□□□□ -0.34
CTSB-222ENST00000531551 TSPOP30536 169 aa12.94□□□□□ -0.34
CTSB-222ENST00000531551 NHLRC2Q8NBF2 726 aa12.94□□□□□ -0.34
CTSB-222ENST00000531551 TVP23CQ96ET8 276 aa12.94□□□□□ -0.34
CTSB-222ENST00000531551 LINC00322Q6ZN03 302 aaPredicted RBP12.93□□□□□ -0.34
CTSB-222ENST00000531551 BAGE2Q86Y30 109 aa12.93□□□□□ -0.34
CTSB-222ENST00000531551 C8orf49Q96NF6 230 aa12.93□□□□□ -0.34
CTSB-222ENST00000531551 ODF3Q96PU9 254 aa12.93□□□□□ -0.34
CTSB-222ENST00000531551 TAS2R60P59551 318 aa12.93□□□□□ -0.34
CTSB-222ENST00000531551 CENPWQ5EE01 88 aa12.93□□□□□ -0.34
CTSB-222ENST00000531551 SAPCD1Q5SSQ6 148 aa12.93□□□□□ -0.34
CTSB-222ENST00000531551 FAM19A4Q96LR4 140 aa12.93□□□□□ -0.34
CTSB-222ENST00000531551 RNASE4P34096 147 aaKnown RBP12.92□□□□□ -0.34
CTSB-222ENST00000531551 GNG4P50150 75 aa12.92□□□□□ -0.34
CTSB-222ENST00000531551 LENEPQ9Y5L5 61 aa12.92□□□□□ -0.34
CTSB-222ENST00000531551 KIR2DL5BA0A0G2JN68 375 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 KIR2DL5BA0A0G2JPC4 375 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 LTAP01374 205 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 BTN1A1Q13410 526 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 KIR2DL5AQ8N109 375 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 ZFAND2AQ8N6M9 145 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 KIR2DL5BQ8NHK3 375 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 SMIM7Q9BQ49 75 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 C1QTNF4Q9BXJ3 329 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 ZFP30Q9Y2G7 519 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 TRAV12-3A0A0B4J271 114 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 TRBV6-1A0A0K0K1D8 114 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 PGPEP1LA6NFU8 196 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 ZNF727A8MUV8 499 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 NDUFS6O75380 124 aaKnown RBP12.91□□□□□ -0.34
CTSB-222ENST00000531551 GIG44P09565 113 aaPredicted RBP12.91□□□□□ -0.34
CTSB-222ENST00000531551 SFTA3P0C7M3 94 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 CRISP2P16562 243 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 PRR9Q5T870 116 aa12.91□□□□□ -0.34
CTSB-222ENST00000531551 GFI1BQ5VTD9 330 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms