RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 MAGEA5P43359 124 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 ZNF136P52737 540 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 GFERP55789 205 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 GNB1P62873 340 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 MLF2Q15773 248 aaPredicted RBP3.05□□□□□ -1.92
CTR9-205ENST00000529898 ABCA11PQ4W5N1 156 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 ZNF493Q6ZR52 646 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 C5orf38Q86SI9 138 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 MARCH3Q86UD3 253 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 SLC22A24Q8N4F4 322 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 RPRMLQ8N4K4 120 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 RPP25LQ8N5L8 163 aaKnown RBP3.05□□□□□ -1.92
CTR9-205ENST00000529898 RNF182Q8N6D2 247 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 ZNF525Q8N782 197 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 DCAF4L2Q8NA75 395 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 RFESDQ8TAC1 157 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 FAM19A4Q96LR4 140 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 S1PR3Q99500 378 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 FOXC2Q99958 501 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 PAXXQ9BUH6 204 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 EMC6Q9BV81 110 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 AICDAQ9GZX7 198 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 GLIPR2Q9H4G4 154 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 DPH3P1Q9H4G8 78 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 DAZ1Q9NQZ3 744 aaKnown RBP3.05□□□□□ -1.92
CTR9-205ENST00000529898 TAAR2Q9P1P5 351 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 Q9UF83 564 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 C2orf16Q68DN1 1984 aa3.05□□□□□ -1.92
CTR9-205ENST00000529898 UBE2L5PA0A1B0GUS4 154 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 MED19A0JLT2 244 aaPredicted RBP3.04□□□□□ -1.92
CTR9-205ENST00000529898 KNCNA6PVL3 124 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 LYRM9A8MSI8 78 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 HMGN4O00479 90 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 UPK2O00526 184 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 SLC25A20O43772 301 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 APOHP02749 345 aaPredicted RBP3.04□□□□□ -1.92
CTR9-205ENST00000529898 IFI6P09912 130 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 NPPCP23582 126 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 SPINT3P49223 89 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 FBXW4P57775 412 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 RSPO1Q2MKA7 263 aaPredicted RBP3.04□□□□□ -1.92
CTR9-205ENST00000529898 TMEM30BQ3MIR4 351 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 C1orf140Q5VVS0 124 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 CXCL17Q6UXB2 119 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 SDIM1Q6ZPB5 146 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 Q6ZQT7 251 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 ODF3L1Q8IXM7 274 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 GVQW1Q8N7I0 195 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 SSMEM1Q8WWF3 244 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 C18orf15Q96N68 181 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 GPX7Q96SL4 187 aaPredicted RBP3.04□□□□□ -1.92
CTR9-205ENST00000529898 HES7Q9BYE0 225 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 GFRA4Q9GZZ7 299 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 C16orf95Q9H693 158 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 DYNLRB1Q9NP97 96 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 OTORQ9NRC9 128 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 RPUSD1Q9UJJ7 312 aaKnown RBP3.04□□□□□ -1.92
CTR9-205ENST00000529898 EPDR1Q9UM22 224 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 LSM4Q9Y4Z0 139 aaKnown RBP3.04□□□□□ -1.92
CTR9-205ENST00000529898 COL5A1P20908 1838 aaPredicted RBP3.04□□□□□ -1.92
CTR9-205ENST00000529898 TRANK1O15050 2925 aa3.04□□□□□ -1.92
CTR9-205ENST00000529898 RALGAPA1Q6GYQ0 2036 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 USP34Q70CQ2 3546 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 KIAA1549Q9HCM3 1950 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 TRBV25-1A0A075B6N4 114 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 IGHV1-58A0A0C4DH39 117 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 A0A1B0GXF2 115 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 PLAC8L1A1L4L8 177 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 PGPA6NDG6 321 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 NCBP2LA6PVI3 153 aaKnown RBP3.03□□□□□ -1.92
CTR9-205ENST00000529898 SCRG1O75711 98 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 TCL1BO95988 128 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 HBDP02042 147 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 UBE2D1P51668 147 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 LINC01547P58512 204 aaPredicted RBP3.03□□□□□ -1.92
CTR9-205ENST00000529898 KCTD18Q6PI47 426 aaPredicted RBP3.03□□□□□ -1.92
CTR9-205ENST00000529898 IGFL2Q6UWQ7 119 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 LYZL2Q7Z4W2 148 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 SRSF12Q8WXF0 261 aaKnown RBP3.03□□□□□ -1.92
CTR9-205ENST00000529898 Q96M85 177 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 C17orf77Q96MU5 243 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 UPK3BQ9BT76 320 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 LIME1Q9H400 295 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 NXT2Q9NPJ8 142 aaKnown RBP3.03□□□□□ -1.92
CTR9-205ENST00000529898 CALYQ9NYX4 217 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 LINC00527Q9UJ94 153 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 CHD9Q3L8U1 2897 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 MKI67P46013 3256 aaKnown RBP3.03□□□□□ -1.92
CTR9-205ENST00000529898 PCNX3Q9H6A9 2034 aa3.03□□□□□ -1.92
CTR9-205ENST00000529898 TRBV20OR9-2A0A075B6H5 130 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 TRBV7-3A0A075B6L6 115 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 TRBV10-2A0A0K0K1G8 114 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 hADV29S1A0JD25 119 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 H3BMM0 161 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 CCL16O15467 120 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 NDUFB3O43676 98 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 NDUFC1O43677 76 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 SYNGR2O43760 224 aa3.02□□□□□ -1.93
CTR9-205ENST00000529898 MGST1P10620 155 aaKnown RBP3.02□□□□□ -1.93
CTR9-205ENST00000529898 CD70P32970 193 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms