RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 WDR73Q6P4I2 378 aa11.74□□□□□ -0.53
CCDC90B-213ENST00000529611 KLHDC1Q8N7A1 406 aa11.74□□□□□ -0.53
CCDC90B-213ENST00000529611 GFRA4Q9GZZ7 299 aa11.74□□□□□ -0.53
CCDC90B-213ENST00000529611 CLEC5AQ9NY25 188 aa11.74□□□□□ -0.53
CCDC90B-213ENST00000529611 XKRY2A2RUG3 117 aa11.73□□□□□ -0.53
CCDC90B-213ENST00000529611 FAM231BA6NCW3 169 aa11.73□□□□□ -0.53
CCDC90B-213ENST00000529611 MT-ND6P03923 174 aa11.73□□□□□ -0.53
CCDC90B-213ENST00000529611 COA6Q5JTJ3 125 aaKnown RBP11.73□□□□□ -0.53
CCDC90B-213ENST00000529611 Q6ZSV7 163 aa11.73□□□□□ -0.53
CCDC90B-213ENST00000529611 HIST3H2BBQ8N257 126 aa11.73□□□□□ -0.53
CCDC90B-213ENST00000529611 WIPF2Q8TF74 440 aaPredicted RBP11.73□□□□□ -0.53
CCDC90B-213ENST00000529611 UFC1Q9Y3C8 167 aa11.73□□□□□ -0.53
CCDC90B-213ENST00000529611 IGHV4OR15-8A0A075B7B6 117 aa11.72□□□□□ -0.53
CCDC90B-213ENST00000529611 A0A087WW49 117 aa11.72□□□□□ -0.53
CCDC90B-213ENST00000529611 GZMBP10144 247 aa11.72□□□□□ -0.53
CCDC90B-213ENST00000529611 RASL11AQ6T310 242 aa11.72□□□□□ -0.53
CCDC90B-213ENST00000529611 C20orf173Q96LM9 149 aa11.72□□□□□ -0.53
CCDC90B-213ENST00000529611 NRN1Q9NPD7 142 aa11.72□□□□□ -0.53
CCDC90B-213ENST00000529611 TMEM213A2RRL7 107 aa11.72□□□□□ -0.53
CCDC90B-213ENST00000529611 ATP5L2Q7Z4Y8 100 aa11.72□□□□□ -0.53
CCDC90B-213ENST00000529611 NF1P21359 2839 aa11.71□□□□□ -0.53
CCDC90B-213ENST00000529611 A0A1B0GXF2 115 aa11.71□□□□□ -0.53
CCDC90B-213ENST00000529611 SH2D1AO60880 128 aa11.71□□□□□ -0.53
CCDC90B-213ENST00000529611 HLA-DQA1P01909 254 aa11.71□□□□□ -0.53
CCDC90B-213ENST00000529611 ZNF80P51504 273 aaPredicted RBP11.71□□□□□ -0.53
CCDC90B-213ENST00000529611 RAB4BP61018 213 aa11.71□□□□□ -0.53
CCDC90B-213ENST00000529611 RPL11P62913 178 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-213ENST00000529611 PDZD11Q5EBL8 140 aa11.71□□□□□ -0.53
CCDC90B-213ENST00000529611 FAM162BQ5T6X4 162 aa11.71□□□□□ -0.53
CCDC90B-213ENST00000529611 RBPMS2Q6ZRY4 209 aaKnown RBP11.71□□□□□ -0.53
CCDC90B-213ENST00000529611 AGPAT4-IT1Q9H0P7 198 aa11.71□□□□□ -0.53
CCDC90B-213ENST00000529611 A8MWP6 167 aa11.7□□□□□ -0.54
CCDC90B-213ENST00000529611 TCTEX1D4Q5JR98 221 aa11.7□□□□□ -0.54
CCDC90B-213ENST00000529611 GDF5OSQ5U4N7 250 aa11.7□□□□□ -0.54
CCDC90B-213ENST00000529611 C18orf65Q6ZTR6 163 aa11.7□□□□□ -0.54
CCDC90B-213ENST00000529611 REC114Q7Z4M0 266 aa11.7□□□□□ -0.54
CCDC90B-213ENST00000529611 LINC00518Q8N0U6 118 aa11.7□□□□□ -0.54
CCDC90B-213ENST00000529611 PGLYRP4Q96LB8 373 aa11.7□□□□□ -0.54
CCDC90B-213ENST00000529611 NDFIP1Q9BT67 221 aa11.7□□□□□ -0.54
CCDC90B-213ENST00000529611 SELENOKQ9Y6D0 94 aa11.7□□□□□ -0.54
CCDC90B-213ENST00000529611 S100A8P05109 93 aa11.7□□□□□ -0.54
CCDC90B-213ENST00000529611 HOXD3P31249 432 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-213ENST00000529611 FOXA3P55318 350 aaPredicted RBP11.7□□□□□ -0.54
CCDC90B-213ENST00000529611 SYNJ2BPP57105 145 aa11.7□□□□□ -0.54
CCDC90B-213ENST00000529611 C9orf47Q6ZRZ4 202 aa11.7□□□□□ -0.54
CCDC90B-213ENST00000529611 SMR3AQ99954 134 aa11.7□□□□□ -0.54
CCDC90B-213ENST00000529611 IGKV3-7A0A075B6H7 116 aa11.69□□□□□ -0.54
CCDC90B-213ENST00000529611 LGALS9O00182 355 aa11.69□□□□□ -0.54
CCDC90B-213ENST00000529611 ZNF738Q8NE65 137 aa11.69□□□□□ -0.54
CCDC90B-213ENST00000529611 TMEM78Q5T7P6 136 aa11.68□□□□□ -0.54
CCDC90B-213ENST00000529611 TMEM160Q9NX00 188 aa11.68□□□□□ -0.54
CCDC90B-213ENST00000529611 OTOGQ6ZRI0 2925 aa11.68□□□□□ -0.54
CCDC90B-213ENST00000529611 HIVEP2P31629 2446 aa11.68□□□□□ -0.54
CCDC90B-213ENST00000529611 A0A1B0GUS0 222 aa11.68□□□□□ -0.54
CCDC90B-213ENST00000529611 GRIFINA4D1Z8 144 aa11.68□□□□□ -0.54
CCDC90B-213ENST00000529611 CAMPP49913 170 aa11.68□□□□□ -0.54
CCDC90B-213ENST00000529611 ZNF138P52744 262 aa11.68□□□□□ -0.54
CCDC90B-213ENST00000529611 HBBP68871 147 aa11.68□□□□□ -0.54
CCDC90B-213ENST00000529611 SLAQ13239 276 aa11.68□□□□□ -0.54
CCDC90B-213ENST00000529611 DEFB136Q30KP8 78 aa11.68□□□□□ -0.54
CCDC90B-213ENST00000529611 PPP1R14DQ9NXH3 145 aa11.68□□□□□ -0.54
CCDC90B-213ENST00000529611 SRD5A1P18405 259 aa11.67□□□□□ -0.54
CCDC90B-213ENST00000529611 BMI1P35226 326 aa11.67□□□□□ -0.54
CCDC90B-213ENST00000529611 SCGB2A2Q13296 93 aa11.67□□□□□ -0.54
CCDC90B-213ENST00000529611 KIAA1644Q3SXP7 199 aa11.67□□□□□ -0.54
CCDC90B-213ENST00000529611 TMEM189A5PLL7 270 aa11.67□□□□□ -0.54
CCDC90B-213ENST00000529611 APCSP02743 223 aa11.67□□□□□ -0.54
CCDC90B-213ENST00000529611 ZNF705DP0CH99 300 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-213ENST00000529611 ZNF705BP0CI00 300 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-213ENST00000529611 CRISP2P16562 243 aa11.67□□□□□ -0.54
CCDC90B-213ENST00000529611 KLF5Q13887 457 aaPredicted RBP11.67□□□□□ -0.54
CCDC90B-213ENST00000529611 C4orf3Q8WVX3 66 aa11.67□□□□□ -0.54
CCDC90B-213ENST00000529611 TMSB15BA0A087X1C1 80 aa11.66□□□□□ -0.54
CCDC90B-213ENST00000529611 RNASE1P07998 156 aaKnown RBP11.66□□□□□ -0.54
CCDC90B-213ENST00000529611 S100A2P29034 98 aa11.66□□□□□ -0.54
CCDC90B-213ENST00000529611 DCANP1Q8TF63 244 aa11.66□□□□□ -0.54
CCDC90B-213ENST00000529611 HIST1H2BLQ99880 126 aa11.66□□□□□ -0.54
CCDC90B-213ENST00000529611 SSBP4Q9BWG4 385 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-213ENST00000529611 FABP5P3A8MUU1 101 aa11.65□□□□□ -0.54
CCDC90B-213ENST00000529611 OVOL1O14753 267 aa11.65□□□□□ -0.54
CCDC90B-213ENST00000529611 FABP4P15090 132 aa11.65□□□□□ -0.54
CCDC90B-213ENST00000529611 DEFB1P60022 68 aa11.65□□□□□ -0.54
CCDC90B-213ENST00000529611 KHDC1LQ5JSQ8 128 aa11.65□□□□□ -0.54
CCDC90B-213ENST00000529611 TMEM256Q8N2U0 113 aa11.65□□□□□ -0.54
CCDC90B-213ENST00000529611 TP53TG3Q9ULZ0 132 aa11.65□□□□□ -0.54
CCDC90B-213ENST00000529611 C2orf70A6NJV1 201 aa11.65□□□□□ -0.55
CCDC90B-213ENST00000529611 HAX1O00165 279 aa11.65□□□□□ -0.55
CCDC90B-213ENST00000529611 ARMS2P0C7Q2 107 aa11.65□□□□□ -0.55
CCDC90B-213ENST00000529611 SLURP1P55000 103 aa11.65□□□□□ -0.55
CCDC90B-213ENST00000529611 Q6AWC8 147 aa11.65□□□□□ -0.55
CCDC90B-213ENST00000529611 ZNF575Q86XF7 245 aa11.65□□□□□ -0.55
CCDC90B-213ENST00000529611 C12orf57Q99622 126 aa11.65□□□□□ -0.55
CCDC90B-213ENST00000529611 A0A1B0GUT8 65 aa11.64□□□□□ -0.55
CCDC90B-213ENST00000529611 LINC01619G3V211 115 aa11.64□□□□□ -0.55
CCDC90B-213ENST00000529611 SRSF2Q01130 221 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-213ENST00000529611 HIST2H2BDQ6DRA6 164 aa11.64□□□□□ -0.55
CCDC90B-213ENST00000529611 OR11H1Q8NG94 326 aa11.64□□□□□ -0.55
CCDC90B-213ENST00000529611 OR10J6PQ8NGY7 276 aa11.64□□□□□ -0.55
CCDC90B-213ENST00000529611 LY6G6DO95868 133 aa11.63□□□□□ -0.55
CCDC90B-213ENST00000529611 AMBPP02760 352 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms