RNA–Protein interactions for RNA: ENST00000529310.5

PCDHA6-203, Transcript of protocadherin alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA6, Length 5,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-203ENST00000529310 UTF1Q5T230 341 aa12.59□□□□□ -0.39
PCDHA6-203ENST00000529310 PRR25Q96S07 402 aa12.59□□□□□ -0.39
PCDHA6-203ENST00000529310 KLK9Q9UKQ9 250 aa12.59□□□□□ -0.39
PCDHA6-203ENST00000529310 TRAV26-2A0A0B4J265 109 aa12.59□□□□□ -0.39
PCDHA6-203ENST00000529310 IGHV3-16A0A0C4DH30 117 aa12.58□□□□□ -0.39
PCDHA6-203ENST00000529310 C10orf91Q5T1B1 145 aa12.58□□□□□ -0.39
PCDHA6-203ENST00000529310 BVES-AS1Q5T3Y7 98 aa12.58□□□□□ -0.39
PCDHA6-203ENST00000529310 ZNF561-AS1K7EIQ3 104 aa12.58□□□□□ -0.4
PCDHA6-203ENST00000529310 ANK1P16157 1881 aa12.58□□□□□ -0.4
PCDHA6-203ENST00000529310 SUMO4Q6EEV6 95 aa12.58□□□□□ -0.4
PCDHA6-203ENST00000529310 NDUFA12Q9UI09 145 aa12.58□□□□□ -0.4
PCDHA6-203ENST00000529310 GPR179Q6PRD1 2367 aa12.58□□□□□ -0.4
PCDHA6-203ENST00000529310 DEFB121Q5J5C9 76 aa12.58□□□□□ -0.4
PCDHA6-203ENST00000529310 LINC01356Q8N9X3 169 aa12.58□□□□□ -0.4
PCDHA6-203ENST00000529310 SIGLEC8Q9NYZ4 499 aa12.58□□□□□ -0.4
PCDHA6-203ENST00000529310 UBE2E1P51965 193 aa12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 ZNF833PQ6ZTB9 187 aa12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 MRPL35Q9NZE8 188 aaKnown RBP12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 PRO1854Q9UHT4 67 aa12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 COL6A6A6NMZ7 2263 aa12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 IGHV1OR15-1A0A075B7D0 117 aa12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 SPANXDQ9BXN6 97 aa12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 A0A1W2PPM0 123 aa12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 HLA-DRB4P13762 266 aa12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 HLA-DRB4X5D2U9 266 aa12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 J3QKU1 62 aa12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 IGKV1-39P01597 117 aa12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 IGKV1D-39P04432 117 aa12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 HAMPP81172 84 aa12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 C1orf147Q96MC9 270 aaPredicted RBP12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 C8orf86Q6ZUL3 223 aa12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 TMEM126AQ9H061 195 aa12.57□□□□□ -0.4
PCDHA6-203ENST00000529310 TCF20Q9UGU0 1960 aaKnown RBP12.56□□□□□ -0.4
PCDHA6-203ENST00000529310 MMP23AO75900 390 aa12.56□□□□□ -0.4
PCDHA6-203ENST00000529310 IFITM1P13164 125 aa12.56□□□□□ -0.4
PCDHA6-203ENST00000529310 KIAA2026Q5HYC2 2103 aa12.56□□□□□ -0.4
PCDHA6-203ENST00000529310 ANXA2RQ3ZCQ2 193 aa12.56□□□□□ -0.4
PCDHA6-203ENST00000529310 CEND1Q8N111 149 aa12.56□□□□□ -0.4
PCDHA6-203ENST00000529310 TMEM14CQ9P0S9 112 aa12.56□□□□□ -0.4
PCDHA6-203ENST00000529310 DOCK10Q96BY6 2186 aa12.56□□□□□ -0.4
PCDHA6-203ENST00000529310 RUSC1-AS1Q66K80 236 aa12.56□□□□□ -0.4
PCDHA6-203ENST00000529310 CADP27708 2225 aa12.56□□□□□ -0.4
PCDHA6-203ENST00000529310 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.56□□□□□ -0.4
PCDHA6-203ENST00000529310 CFHR3Q02985 330 aa12.56□□□□□ -0.4
PCDHA6-203ENST00000529310 TAL2Q16559 108 aa12.55□□□□□ -0.4
PCDHA6-203ENST00000529310 SP5Q6BEB4 398 aaPredicted RBP12.55□□□□□ -0.4
PCDHA6-203ENST00000529310 RNF114Q9Y508 228 aa12.55□□□□□ -0.4
PCDHA6-203ENST00000529310 H3BRN7 92 aa12.55□□□□□ -0.4
PCDHA6-203ENST00000529310 NPYP01303 97 aa12.55□□□□□ -0.4
PCDHA6-203ENST00000529310 F8VRH5 84 aa12.55□□□□□ -0.4
PCDHA6-203ENST00000529310 AZU1P20160 251 aa12.55□□□□□ -0.4
PCDHA6-203ENST00000529310 NCOR1P1Q9H4R4 102 aa12.55□□□□□ -0.4
PCDHA6-203ENST00000529310 G3V318 75 aa12.55□□□□□ -0.4
PCDHA6-203ENST00000529310 Q8TCH9 128 aa12.55□□□□□ -0.4
PCDHA6-203ENST00000529310 PIP4P1Q86T03 277 aa12.54□□□□□ -0.4
PCDHA6-203ENST00000529310 ZNRF2Q8NHG8 242 aa12.54□□□□□ -0.4
PCDHA6-203ENST00000529310 SMIM2Q9BVW6 85 aa12.54□□□□□ -0.4
PCDHA6-203ENST00000529310 GAGE12HA6NDE8 117 aa12.54□□□□□ -0.4
PCDHA6-203ENST00000529310 GATA4P43694 442 aa12.54□□□□□ -0.4
PCDHA6-203ENST00000529310 IGFL3Q6UXB1 125 aa12.54□□□□□ -0.4
PCDHA6-203ENST00000529310 NXPH4O95158 308 aa12.54□□□□□ -0.4
PCDHA6-203ENST00000529310 TMEM243Q9BU79 118 aa12.54□□□□□ -0.4
PCDHA6-203ENST00000529310 DIDO1Q9BTC0 2240 aaKnown RBP12.54□□□□□ -0.4
PCDHA6-203ENST00000529310 PLXNA3P51805 1871 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 C17orf58Q2M2W7 97 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 VWC2Q2TAL6 325 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 HAPLN4Q86UW8 402 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 ROS1P08922 2347 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 NKAPP1Q8N9T2 125 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 CARD19Q96LW7 228 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 ARFGEF3Q5TH69 2177 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 IGHV3-38A0A0C4DH36 116 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 LY6G6EA0A0G2JKS1 128 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 H3BMG7 143 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 U3KQA8 63 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 FANCMQ8IYD8 2048 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 F5H768 121 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 LINC01619G3V211 115 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 ZC2HC1AQ96GY0 325 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 CITED1Q99966 193 aa12.53□□□□□ -0.4
PCDHA6-203ENST00000529310 CDKN1BP46527 198 aa12.52□□□□□ -0.4
PCDHA6-203ENST00000529310 WT1-ASQ06250 92 aa12.52□□□□□ -0.4
PCDHA6-203ENST00000529310 C11orf52Q96A22 123 aa12.52□□□□□ -0.4
PCDHA6-203ENST00000529310 CRLF1O75462 422 aa12.52□□□□□ -0.4
PCDHA6-203ENST00000529310 TANC1Q9C0D5 1861 aa12.52□□□□□ -0.41
PCDHA6-203ENST00000529310 DAD1P61803 113 aa12.52□□□□□ -0.41
PCDHA6-203ENST00000529310 MSMBP08118 114 aa12.52□□□□□ -0.41
PCDHA6-203ENST00000529310 Q6ZR03 302 aa12.52□□□□□ -0.41
PCDHA6-203ENST00000529310 SCRT2Q9NQ03 307 aa12.52□□□□□ -0.41
PCDHA6-203ENST00000529310 J3QQQ9 107 aa12.52□□□□□ -0.41
PCDHA6-203ENST00000529310 K7ERJ3 54 aa12.52□□□□□ -0.41
PCDHA6-203ENST00000529310 SIVA1O15304 175 aa12.52□□□□□ -0.41
PCDHA6-203ENST00000529310 TRACP01848 142 aa12.52□□□□□ -0.41
PCDHA6-203ENST00000529310 TEX36Q5VZQ5 186 aa12.52□□□□□ -0.41
PCDHA6-203ENST00000529310 ETV2O00321 342 aaPredicted RBP12.51□□□□□ -0.41
PCDHA6-203ENST00000529310 NDUFA4O00483 81 aa12.51□□□□□ -0.41
PCDHA6-203ENST00000529310 GAGE6Q13070 117 aa12.51□□□□□ -0.41
PCDHA6-203ENST00000529310 PI4KAP42356 2102 aa12.51□□□□□ -0.41
PCDHA6-203ENST00000529310 TRAV12-2A0A075B6T6 113 aa12.51□□□□□ -0.41
PCDHA6-203ENST00000529310 TRAV25A0A0B4J276 109 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms