RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 Q5XG85 94 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 C4orf22Q6V702 233 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 Q8N814 137 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 MORN4Q8NDC4 146 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 OR5A2Q8NGI9 324 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 OR51A4Q8NGJ6 313 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 HYLS1Q96M11 299 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 HSPB8Q9UJY1 196 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 MICAL3Q7RTP6 2002 aa1.77□□□□□ -2.13
SQLE-204ENST00000520493 THOC2Q8NI27 1593 aaKnown RBP1.76□□□□□ -2.13
SQLE-204ENST00000520493 RP1P56715 2156 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 KDM6AO15550 1401 aaPredicted RBP1.76□□□□□ -2.13
SQLE-204ENST00000520493 TNS3Q68CZ2 1445 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 COL11A1P12107 1806 aaPredicted RBP1.76□□□□□ -2.13
SQLE-204ENST00000520493 M0R233 179 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 GPX1P07203 203 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 CMPK1P30085 196 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 BRS3P32247 399 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 KRTAP12-3P60328 96 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 DEFB113Q30KQ7 82 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 FP248Q71RG6 208 aaPredicted RBP1.76□□□□□ -2.13
SQLE-204ENST00000520493 COA5Q86WW8 74 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 OR5D14Q8NGL3 314 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 CCL4L1Q8NHW4 92 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 C4orf3Q8WVX3 66 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 MAGOHBQ96A72 148 aaKnown RBP1.76□□□□□ -2.13
SQLE-204ENST00000520493 MUCL1Q96DR8 90 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 TAF9BQ9HBM6 251 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 PAIP2BQ9ULR5 123 aaKnown RBP1.76□□□□□ -2.13
SQLE-204ENST00000520493 GVINP1Q7Z2Y8 2422 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 NF1P21359 2839 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 ZANQ9Y493 2812 aa1.76□□□□□ -2.13
SQLE-204ENST00000520493 BSNQ9UPA5 3926 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 HEATR5BQ9P2D3 2071 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 TRAV27A0A087WT01 109 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 IGKV2D-26A0A0A0MRZ7 120 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 TRAV14DV4A0A0A6YYC5 116 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 TCRBV4S1A1TA0A5B7 111 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 hDV103S1A0JD37 113 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 OR2T8A6NH00 312 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 CRYGSP22914 178 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 MAXP61244 160 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 PSPHP78330 225 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 CDK6Q00534 326 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 CDK5R1Q15078 307 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 C1orf134Q5TEV5 83 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 C2orf82Q6UX34 121 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 Q6ZRN7 208 aaPredicted RBP1.75□□□□□ -2.13
SQLE-204ENST00000520493 TEX29Q8N6K0 151 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 COPZ2Q9P299 210 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 DLC1Q96QB1 1528 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 COL5A1P20908 1838 aaPredicted RBP1.75□□□□□ -2.13
SQLE-204ENST00000520493 CEP290O15078 2479 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 CEP250Q9BV73 2442 aa1.75□□□□□ -2.13
SQLE-204ENST00000520493 FAM135BQ49AJ0 1406 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 COL5A3P25940 1745 aaPredicted RBP1.74□□□□□ -2.13
SQLE-204ENST00000520493 SCRIBQ14160 1630 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 CICQ96RK0 1608 aaPredicted RBP1.74□□□□□ -2.13
SQLE-204ENST00000520493 GBF1Q92538 1859 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 A0A1B0GW64 132 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 B4DSR2 109 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 MPC1LP0DKB6 136 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 TPT1P13693 172 aaKnown RBP1.74□□□□□ -2.13
SQLE-204ENST00000520493 FABP4P15090 132 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 EVI2AP22794 236 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 DEFB103AP81534 67 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 C1orf137Q5JT78 98 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 C10orf55Q5SWW7 151 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 OR4S1Q8NGB4 309 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 BRK1Q8WUW1 75 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 Q96M85 177 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 TP53RKQ96S44 253 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 FAM107BQ9H098 131 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 TPRKBQ9Y3C4 175 aa1.74□□□□□ -2.13
SQLE-204ENST00000520493 CHCHD2Q9Y6H1 151 aaPredicted RBP1.74□□□□□ -2.13
SQLE-204ENST00000520493 USP9YO00507 2555 aaPredicted RBP1.73□□□□□ -2.13
SQLE-204ENST00000520493 KIF13AQ9H1H9 1805 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 DCHS1Q96JQ0 3298 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 VWDEQ8N2E2 1590 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 RB1CC1Q8TDY2 1594 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 DSPPQ9NZW4 1301 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 FANCMQ8IYD8 2048 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 PCDH15Q96QU1 1955 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 UQCRQO14949 82 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 PAEPP09466 180 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 SAA1P0DJI8 122 aaPredicted RBP1.73□□□□□ -2.13
SQLE-204ENST00000520493 FOXA3P55318 350 aaPredicted RBP1.73□□□□□ -2.13
SQLE-204ENST00000520493 LSM3P62310 102 aaKnown RBP1.73□□□□□ -2.13
SQLE-204ENST00000520493 KRTAP13-4Q3LI77 160 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 CCDC58Q4VC31 144 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 TMEM14EPQ6UXP3 125 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 ARPINQ7Z6K5 226 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 LRRC18Q8N456 261 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 OR8J3Q8NGG0 315 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 RAB37Q96AX2 223 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 TPT1P8Q9HAU6 139 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 COL24A1Q17RW2 1714 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 MED12LQ86YW9 2145 aa1.73□□□□□ -2.13
SQLE-204ENST00000520493 PCNX1Q96RV3 2341 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms