RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 GNG4P50150 75 aa1.86□□□□□ -2.11
HMGB1P46-201ENST00000520062 COPZ1P61923 177 aa1.86□□□□□ -2.11
HMGB1P46-201ENST00000520062 C1orf137Q5JT78 98 aa1.86□□□□□ -2.11
HMGB1P46-201ENST00000520062 PPTC7Q8NI37 304 aa1.86□□□□□ -2.11
HMGB1P46-201ENST00000520062 LPAR5Q9H1C0 372 aa1.86□□□□□ -2.11
HMGB1P46-201ENST00000520062 METTL1Q9UBP6 276 aaKnown RBP1.86□□□□□ -2.11
HMGB1P46-201ENST00000520062 LY96Q9Y6Y9 160 aa1.86□□□□□ -2.11
HMGB1P46-201ENST00000520062 V9GYS6 101 aa1.86□□□□□ -2.11
HMGB1P46-201ENST00000520062 CCDC18Q5T9S5 1454 aa1.86□□□□□ -2.11
HMGB1P46-201ENST00000520062 TMEM2Q9UHN6 1383 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 SCN8AQ9UQD0 1980 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 NSD3Q9BZ95 1437 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 PNMA8CA0A1B0GUJ8 204 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 PAEPP09466 180 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 GUCA1AP43080 201 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 ROMO1P60602 79 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 CDK6Q00534 326 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 EIF3IQ13347 325 aaKnown RBP1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 COL5A1-AS1Q5SY13 56 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 C1orf140Q5VVS0 124 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 SCIMPQ6UWF3 145 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 OR4S1Q8NGB4 309 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 OR5H6Q8NGV6 325 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 OR2T35Q8NGX2 323 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 TMEM254Q8TBM7 123 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 Q9H521 79 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 SCN3BQ9NY72 215 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 MED14O60244 1454 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 POLEQ07864 2286 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 TCHHQ07283 1943 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 ANKRD26Q9UPS8 1709 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 KDM5CP41229 1560 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 SORL1Q92673 2214 aa1.85□□□□□ -2.11
HMGB1P46-201ENST00000520062 TROQ12816 1431 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 RRBP1Q9P2E9 1410 aaKnown RBP1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 MYLKQ15746 1914 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 ALPK3Q96L96 1907 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 MYH4Q9Y623 1939 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 NCAPD3P42695 1498 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 GRIN2AQ12879 1464 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 MAGI1Q96QZ7 1491 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 ARHGAP35Q9NRY4 1499 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 BCORL1Q5H9F3 1711 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 SMIM31A0A1B0GVY4 71 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 AKAIN1P0CW23 69 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 RAB5CP51148 216 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 NDUFA6P56556 154 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 BTG2P78543 158 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 MSMO1Q15800 293 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 RTL8BQ17RB0 113 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 GLYATL3Q5SZD4 288 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 C6orf52Q5T4I8 152 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 PATE2Q6UY27 113 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 GTF2H5Q6ZYL4 71 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 PP6455Q8WZ26 134 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 AP1S3Q96PC3 154 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 TMEM191AQ9H0A3 160 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 TCEAL2Q9H3H9 227 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 CCDC167Q9P0B6 97 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 TNFSF18Q9UNG2 199 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 MAPKBP1O60336 1514 aa1.84□□□□□ -2.11
HMGB1P46-201ENST00000520062 MYH8P13535 1937 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 KDM5AP29375 1690 aaKnown RBP1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 TECPR2O15040 1411 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 MYOM3Q5VTT5 1437 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 CAMSAP2Q08AD1 1489 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 ABCC10Q5T3U5 1492 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 PSME4Q14997 1843 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 TRBV7-6A0A0J9YX20 115 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 TRDV1A0A1B0GX56 115 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 CDC42EP2O14613 210 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 CCL25O15444 150 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 PRR15Q8IV56 129 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 C9orf62Q8N4C0 152 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 C10orf105Q8TEF2 133 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 OR4C12Q96R67 309 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 MRPL57Q9BQC6 102 aaKnown RBP1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 KLK9Q9UKQ9 250 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 BOKQ9UMX3 212 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 IER3IP1Q9Y5U9 82 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 DOCK1Q14185 1865 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 MYH1P12882 1939 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 KIAA1107Q9UPP5 1409 aa1.83□□□□□ -2.12
HMGB1P46-201ENST00000520062 NINQ8N4C6 2090 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 CEP164Q9UPV0 1460 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 ZFYVE16Q7Z3T8 1539 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 A0A1B0GW64 132 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 BBIP1A8MTZ0 92 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 C17orf112F2Z3M2 114 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 NPFFO15130 113 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 IGLC6P0CF74 106 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 CRYGSP22914 178 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 TMBIM6P55061 237 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 CNBPP62633 177 aaKnown RBP1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 VMA21Q3ZAQ7 101 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 NCMAPQ5T1S8 102 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 FKBP1CQ5VVH2 108 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 Q6ZSA8 131 aa1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 PHF5AQ7RTV0 110 aaKnown RBP1.82□□□□□ -2.12
HMGB1P46-201ENST00000520062 C4orf33Q8N1A6 199 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms