RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 PRELID3AQ96N28 172 aa0.31□□□□□ -2.36
RNU6-1041P-201ENST00000516254 CIB3Q96Q77 187 aaPredicted RBP0.31□□□□□ -2.36
RNU6-1041P-201ENST00000516254 LXNQ9BS40 222 aa0.31□□□□□ -2.36
RNU6-1041P-201ENST00000516254 PCBD2Q9H0N5 130 aa0.31□□□□□ -2.36
RNU6-1041P-201ENST00000516254 OTORQ9NRC9 128 aa0.31□□□□□ -2.36
RNU6-1041P-201ENST00000516254 C19orf12Q9NSK7 152 aa0.31□□□□□ -2.36
RNU6-1041P-201ENST00000516254 MGAMO43451 1857 aa0.31□□□□□ -2.36
RNU6-1041P-201ENST00000516254 DOCK4Q8N1I0 1966 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 TENM3Q9P273 2699 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 TRBV7-6A0A0J9YX20 115 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 TRBV27A0A0K0K1C4 114 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 A0A1B0GV72 72 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 LOC107986453A0A1B0GWG9 222 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 ARL5CA6NH57 179 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 GABARAPH6UMI1 98 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 GYPBP06028 91 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 FREM3P0C091 2139 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 GNG10P50151 68 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 FXYD4P59646 89 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 DNAJB13P59910 316 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 RPL37AP61513 92 aaKnown RBP0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 NEDD8Q15843 81 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 TCTEX1D1Q8N7M0 179 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 RMND5BQ96G75 393 aaPredicted RBP0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 PLAC8Q9NZF1 115 aa0.3□□□□□ -2.36
RNU6-1041P-201ENST00000516254 DLC1Q96QB1 1528 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 NUP210LQ5VU65 1888 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 A0A0D9SG42 100 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 A0A1W2PRE2 83 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 IFITM5A6NNB3 132 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 BBIP1A8MTZ0 92 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 S100A11P31949 105 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 ETV6P41212 452 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 ZNF137PP52743 207 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 CAV3P56539 151 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 SPINK13Q1W4C9 94 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 ASB16-AS1Q495Z4 193 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 PPP1R2P3Q6NXS1 205 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 ZCCHC23Q6ZST2 131 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 C3orf62Q6ZUJ4 267 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 LINC00305Q7Z4B0 112 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 MORN4Q8NDC4 146 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 OR9Q1Q8NGQ5 310 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 THEM6Q8WUY1 208 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 CLEC2BQ92478 149 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 CARD19Q96LW7 228 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 CCL19Q99731 98 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 SMPXQ9UHP9 88 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 MED31Q9Y3C7 131 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 MPC1Q9Y5U8 109 aa0.29□□□□□ -2.36
RNU6-1041P-201ENST00000516254 EML5Q05BV3 1969 aa0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 MYO18AQ92614 2054 aaKnown RBP0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 MED12Q93074 2177 aa0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 ASCC3Q8N3C0 2202 aaKnown RBP0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 TRAV13-1A0A0B4J241 112 aa0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 C3orf85A0A1B0GTC6 90 aa0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 NUPR2A6NF83 97 aa0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 H7BYZ3 331 aa0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 RPS3P23396 243 aaKnown RBP eCLIP0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 KDELR1P24390 212 aa0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 G0S2P27469 103 aa0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 SPINT3P49223 89 aa0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 SPINK7P58062 85 aa0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 XAF1Q6GPH4 301 aa0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 TMEM229BQ8NBD8 167 aa0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 DDA1Q9BW61 102 aa0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 LPAR5Q9H1C0 372 aa0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 MRPL35Q9NZE8 188 aaKnown RBP0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 MYO5AQ9Y4I1 1855 aaKnown RBP0.28□□□□□ -2.36
RNU6-1041P-201ENST00000516254 A2MP01023 1474 aa0.28□□□□□ -2.37
RNU6-1041P-201ENST00000516254 N4BP2Q86UW6 1770 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 PTPRFP10586 1907 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 CASP8AP2Q9UKL3 1982 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 PNMA8CA0A1B0GUJ8 204 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 A0A1W2PPB8 328 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 A0A1W2PRS3 328 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 PRORSD1PA6NEY8 169 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 KIR3DP1A8MWS1 328 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 H3BMG7 143 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 SNRNP200O75643 2136 aaKnown RBP0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 IGF2P01344 180 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 IFNA21P01568 189 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 EVI2AP22794 236 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 POLR2HP52434 150 aaKnown RBP0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 C6orf52Q5T4I8 152 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 DEFB132Q7Z7B7 95 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 Q86TA4 180 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 OR8J3Q8NGG0 315 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 OR5A2Q8NGI9 324 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 SKA2Q8WVK7 121 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 LIMD2Q9BT23 127 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 TAF9BQ9HBM6 251 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 SPANXA1Q9NS26 97 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 SPANXCQ9NY87 97 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 FGD6Q6ZV73 1430 aa0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 SYNE2Q8WXH0 6885 aaKnown RBP0.27□□□□□ -2.37
RNU6-1041P-201ENST00000516254 HEATR1Q9H583 2144 aaKnown RBP0.26□□□□□ -2.37
RNU6-1041P-201ENST00000516254 UNC13CQ8NB66 2214 aa0.26□□□□□ -2.37
RNU6-1041P-201ENST00000516254 HIGD1CA8MV81 97 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms