RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 CIARTQ8N365 385 aaPredicted RBP5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 LINC00526Q96FQ7 95 aa5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 DPH3Q96FX2 82 aa5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 CNOT1A5YKK6 2376 aaKnown RBP5.93□□□□□ -1.46
PDLIM5-219ENST00000514743 RRHO14718 337 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 RRN3P1Q2M238 152 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 FAM19A1Q7Z5A9 133 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 C9orf85Q96MD7 179 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 CTXND1A0A1B0GTU2 59 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 FAM90A9PA6NNJ1 464 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 C15orf62A8K5M9 175 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 H3BVH4 76 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 K7EMI3 77 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 PRRG2O14669 202 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 MGST3O14880 152 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 SPINT2O43291 252 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 OXTP01178 125 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 C17orf58Q2M2W7 97 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 FAM201AQ5SY85 155 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 LINC01545Q5VT33 79 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 TEX36Q5VZQ5 186 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 ZNF493Q6ZR52 646 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 SPACA3Q8IXA5 215 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 VKORC1L1Q8N0U8 176 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 CEND1Q8N111 149 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 NUP35Q8NFH5 326 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 OR9G1Q8NH87 305 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 ITLN1Q8WWA0 313 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 DSCR8Q96T75 97 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 M0R2P5 195 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 ATP5G3P48201 142 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 KLF5Q13887 457 aaPredicted RBP5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 RPL39P5Q59GN2 51 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 FAM231DQ6ZW35 169 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 ZMAT4Q9H898 229 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 AP5S1Q9NUS5 200 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 TP53TG1Q9Y2A0 90 aa5.92□□□□□ -1.46
PDLIM5-219ENST00000514743 A8MWV9 139 aa5.91□□□□□ -1.46
PDLIM5-219ENST00000514743 PRSS46E5RG02 174 aa5.91□□□□□ -1.46
PDLIM5-219ENST00000514743 PSMB2P49721 201 aa5.91□□□□□ -1.46
PDLIM5-219ENST00000514743 Q96MF0 132 aa5.91□□□□□ -1.46
PDLIM5-219ENST00000514743 NPCDR1Q9BY65 106 aa5.91□□□□□ -1.46
PDLIM5-219ENST00000514743 KCNIP2Q9NS61 270 aa5.91□□□□□ -1.46
PDLIM5-219ENST00000514743 TRBV20OR9-2A0A075B6H5 130 aa5.91□□□□□ -1.46
PDLIM5-219ENST00000514743 SPRY3O43610 288 aa5.91□□□□□ -1.46
PDLIM5-219ENST00000514743 FCGR3BO75015 233 aa5.91□□□□□ -1.46
PDLIM5-219ENST00000514743 ROS1P08922 2347 aa5.91□□□□□ -1.46
PDLIM5-219ENST00000514743 ABHD12Q8N2K0 398 aa5.91□□□□□ -1.46
PDLIM5-219ENST00000514743 ANKRD29Q8N6D5 301 aa5.91□□□□□ -1.46
PDLIM5-219ENST00000514743 TRAV2A0A0B4J234 112 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 OVOL1O14753 267 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 EDDM3BP56851 147 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 CHAC1Q9BUX1 264 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 TPSG1Q9NRR2 321 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 CALYQ9NYX4 217 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 GVINP1Q7Z2Y8 2422 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 TRAV3A0A0B4J244 114 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 LINC01548A6NM66 108 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 IGHV1-46P01743 117 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 TRACP01848 142 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 OR5AL1P0C617 328 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 PCP2Q8IVA1 136 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 FAM57AQ8TBR7 257 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 LEAP2Q969E1 77 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 GNG12Q9UBI6 72 aa5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 LSM4Q9Y4Z0 139 aaKnown RBP5.9□□□□□ -1.46
PDLIM5-219ENST00000514743 PLCE1Q9P212 2302 aa5.9□□□□□ -1.47
PDLIM5-219ENST00000514743 TMEM178BH3BS89 294 aa5.9□□□□□ -1.47
PDLIM5-219ENST00000514743 CDSNQ15517 529 aa5.9□□□□□ -1.47
PDLIM5-219ENST00000514743 C12orf74Q32Q52 190 aa5.9□□□□□ -1.47
PDLIM5-219ENST00000514743 WFDC11Q8NEX6 87 aa5.9□□□□□ -1.47
PDLIM5-219ENST00000514743 GAFA1Q96PS6 74 aa5.9□□□□□ -1.47
PDLIM5-219ENST00000514743 DCHS2Q6V1P9 2916 aa5.9□□□□□ -1.47
PDLIM5-219ENST00000514743 RELNP78509 3460 aa5.9□□□□□ -1.47
PDLIM5-219ENST00000514743 TCRBV4S1A1TA0A5B7 111 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 TNP2Q05952 138 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 MLST8Q9BVC4 326 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 EPDR1Q9UM22 224 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 V9GYV3 84 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 C16orf97H3BN30 126 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 DPM2O94777 84 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 SAA2P0DJI9 122 aaPredicted RBP5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 CD40P25942 277 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 TMEM258P61165 79 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 OR11H6Q8NGC7 330 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 CHCHD1Q96BP2 118 aaKnown RBP5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 WDR83OSQ9Y284 106 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 TRAV13-1A0A0B4J241 112 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 TRAV8-4A0A0B4J246 113 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 GFRA3O60609 400 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 FXYD3Q14802 87 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 FAM19A4Q96LR4 140 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 LINC00574Q9H8X3 128 aa5.89□□□□□ -1.47
PDLIM5-219ENST00000514743 A0A0G2JNJ9 132 aa5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 FOXA3P55318 350 aaPredicted RBP5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 FAM216BQ8N7L0 139 aa5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 Q8NA96 180 aa5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 NUP37Q8NFH4 326 aa5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 RNF7Q9UBF6 113 aa5.88□□□□□ -1.47
PDLIM5-219ENST00000514743 Q9UFV3 132 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms